Expression of PFN1 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

PFN1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 883.86

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

815.8

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	7143.6
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	2528.5
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	2058.3
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	2028.8
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	1979.5
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	1892.2
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	1832.7
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	1826.9
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	1783.1
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	1777.1
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	1706.2
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	1685.0
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	1663.0
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	1614.1
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	1604.0
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	1565.5
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	1539.2
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	1535.2
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	1526.7
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	1450.2
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	1422.9
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	1422.3
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	1419.8
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	1409.9
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	1386.1
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	1358.9
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	1349.4
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	1338.0
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	1303.1
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	1299.8
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	1298.3
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	1297.1
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	1296.6
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	1294.1
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	1270.4
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	1267.9
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	1252.0
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	1237.2
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	1233.6
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	1230.3
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	1217.7
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	1211.1
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	1207.8
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	1205.2
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	1203.4
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	1199.5
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	1190.5
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	1183.1
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	1182.0
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	1171.7
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	1160.6
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	1151.9
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	1148.7
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	1148.6
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	1144.1
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	1142.0
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	1134.8
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	1134.0
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	1124.2
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	1123.2
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	1113.6
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	1111.7
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	1108.2
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	1107.9
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	1104.8
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	1103.7
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	1099.8
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	1096.7
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	1082.4
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	1069.8
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	1066.8
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	1063.6
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	1060.5
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	1059.3
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	1058.7
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	1051.8
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	1049.7
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	1049.3
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	1035.0
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	1032.7
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	1032.2
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	1028.7
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	1023.7
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	1023.2
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	1010.7
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	998.7
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	996.2
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	994.6
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	992.8
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	986.4
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	980.7
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	979.8
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	973.7
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	947.0
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	945.7
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	945.6
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	936.4
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	935.6
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	933.7
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	933.4
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	929.9
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	929.6
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	919.0
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	917.2
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	915.9
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	915.3
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	905.7
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	900.9
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	899.4
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	890.1
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	886.4
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	886.3
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	885.2
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	884.4
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	883.4
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	876.0
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	872.8
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	872.3
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	867.1
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	866.3
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	863.7
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	862.8
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	859.0
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	855.2
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	847.2
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	840.7
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	840.1
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	836.8
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	833.9
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	828.9
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	825.5
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	824.7
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	822.5
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	821.3
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	819.4
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	818.7
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	817.1
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	816.3
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	815.9
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	815.5
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	815.0
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	813.3
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	812.8
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	810.3
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	809.5
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	809.2
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	808.5
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	805.9
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	793.9
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	790.8
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	789.6
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	784.7
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	783.0
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	782.7
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	781.9
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	779.9
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	779.5
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	772.7
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	767.9
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	764.9
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	762.5
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	761.3
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	757.5
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	755.7
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	755.3
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	753.6
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	752.9
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	751.8
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	741.5
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	733.0
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	731.2
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	731.2
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	729.3
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	729.2
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	728.0
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	726.4
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	725.2
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	725.0
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	723.8
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	723.3
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	723.1
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	721.2
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	720.4
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	717.1
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	716.7
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	714.1
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	710.6
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	709.3
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	708.5
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	705.8
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	705.1
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	704.7
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	703.4
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	703.3
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	702.6
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	702.0
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	699.5
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	698.1
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	696.6
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	696.3
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	694.8
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	687.8
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	683.9
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	682.6
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	680.4
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	680.3
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	676.3
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	674.8
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	671.8
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	671.3
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	667.5
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	667.3
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	666.6
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	666.2
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	664.3
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	662.9
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	661.4
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	659.2
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	657.9
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	652.7
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	648.4
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	647.9
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	645.2
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	643.4
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	636.5
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	634.5
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	631.3
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	631.1
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	627.1
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	625.4
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	623.3
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	623.2
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	622.8
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	621.3
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	620.8
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	615.6
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	615.5
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	610.1
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	601.0
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	599.3
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	599.1
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	597.0
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	596.3
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	595.8
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	595.4
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	592.9
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	592.1
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	590.9
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	588.1
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	587.4
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	582.8
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	582.6
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	582.1
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	579.8
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	579.1
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	578.7
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	577.4
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	569.6
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	564.1
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	564.0
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	563.6
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	563.4
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	563.1
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	561.3
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	560.7
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	560.2
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	559.3
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	553.9
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	551.9
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	551.6
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	551.4
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	550.1
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	548.2
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	548.0
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	544.9
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	543.8
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	543.1
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	539.5
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	536.3
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	534.2
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	532.4
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	530.7
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	527.3
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	526.9
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	521.5
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	521.4
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	521.1
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	519.1
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	518.1
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	518.0
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	515.5
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	515.1
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	512.0
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	511.2
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	506.1
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	501.9
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	501.0
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	500.5
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	497.4
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	494.5
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	490.6
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	490.2
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	487.5
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	486.7
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	485.1
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	483.6
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	479.9
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	477.8
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	477.0
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	475.9
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	475.0
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	474.2
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	473.6
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	473.5
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	470.0
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	469.3
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	468.5
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	465.3
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	463.6
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	462.5
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	461.0
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	459.9
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	459.2
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	458.4
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	457.7
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	455.1
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	454.8
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	451.0
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	446.1
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	446.0
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	436.5
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	434.1
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	431.5
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	427.4
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	425.8
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	422.9
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	421.3
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	418.4
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	403.7
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	399.5
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	399.2
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	393.9
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	390.9
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	383.7
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	377.2
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	376.8
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	374.2
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	367.4
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	337.7
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	325.9
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	323.8
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	320.1
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	319.5
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	312.2
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	297.2
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	283.7
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	270.3
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	268.1
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	262.7
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	224.7
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	220.7
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	208.6
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

PFN1 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 822.42

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

955.7

Number of samples

231

Samples

Sample	Description	pTPM
DO45307	54 years, female, NA, stage:4, dead, 240 days	3553.5
DO45277	64 years, male, NA, stage:3, alive, 600 days	3239.8
DO45301	56 years, male, NA, stage:2, dead, 1440 days	3026.3
DO45287	74 years, male, NA, stage:1, alive, 390 days	2726.0
DO45209	70 years, male, NA, stage:4, alive, 1350 days	2564.7
DO45305	66 years, male, NA, stage:4, alive, 300 days	2544.8
DO45259	65 years, male, NA, stage:3, alive, 330 days	2483.0
DO48747	62 years, male, NA, stage:3, alive, 540 days	2473.9
DO45289	78 years, female, NA, stage:3, alive, 360 days	2338.0
DO23526	66 years, male, NA, stage:3, alive, 1050 days	2135.2
DO45249	57 years, male, NA, stage:1, alive, 630 days	2097.4
DO23508	79 years, female, NA, stage:2, alive, 390 days	1990.9
DO45211	76 years, male, NA, stage:3, alive, 240 days	1990.8
DO45145	78 years, male, NA, stage:3, dead, 60 days	1990.2
DO45155	69 years, male, NA, stage:2, alive, 2160 days	1983.4
DO23523	52 years, male, NA, stage:3, alive, 1080 days	1979.7
DO45139	63 years, male, NA, stage:3, alive, 1320 days	1968.0
DO45185	89 years, male, NA, stage:2, alive, 600 days	1949.3
DO45297	61 years, female, NA, stage:4, dead, 1260 days	1892.9
DO50778	60 years, male, NA, stage:4, alive, 630 days	1861.5
DO45299	70 years, female, NA, stage:1, alive, 1440 days	1840.3
DO23547	74 years, male, NA, stage:1, alive, 1020 days	1768.2
DO45285	59 years, male, NA, stage:3, alive, 480 days	1685.2
DO45251	57 years, female, NA, stage:2, alive, 900 days	1624.6
DO45275	65 years, male, NA, stage:3, dead, 10 days	1622.3
DO45303	62 years, female, NA, stage:3, alive, 990 days	1613.3
DO45183	72 years, female, NA, stage:2, dead, 570 days	1591.0
DO50800	74 years, male, NA, stage:2, alive, 510 days	1584.5
DO48697	64 years, female, NA, stage:2, dead, 810 days	1557.7
DO23549	74 years, male, NA, stage:3, alive, 990 days	1542.4
DO48717	54 years, male, NA, stage:4, dead, 180 days	1489.3
DO45279	67 years, male, NA, stage:3, alive, 1290 days	1442.8
DO50829	78 years, male, NA, stage:3, alive, 570 days	1432.8
DO50805	72 years, male, NA, stage:2, alive, 690 days	1421.7
DO23519	65 years, male, NA, stage:3, alive, 630 days	1393.3
DO48737	52 years, male, NA, stage:1, alive, 720 days	1339.8
DO50819	72 years, female, NA, stage:2, alive, 510 days	1330.1
DO45205	67 years, female, NA, stage:2, dead, 90 days	1327.5
DO23530	53 years, male, NA, stage:4, dead, 180 days	1321.4
DO23535	67 years, male, NA, stage:1, alive, 960 days	1306.9
DO48728	74 years, female, NA, stage:2, alive, 150 days	1303.4
DO48720	62 years, female, NA, stage:2, alive, 570 days	1301.2
DO45257	46 years, male, NA, stage:3, alive, 810 days	1284.7
DO50799	66 years, female, NA, stage:2, alive, 540 days	1263.2
DO50806	70 years, male, NA, stage:4, alive, 540 days	1259.6
DO45173	63 years, male, NA, stage:3, alive, 1170 days	1255.4
DO50802	49 years, male, NA, stage:2, alive, 930 days	1242.7
DO48695	77 years, male, NA, stage:2, alive, 720 days	1238.1
DO23525	71 years, male, NA, stage:4, alive, 1050 days	1222.7
DO45245	75 years, female, NA, stage:2, dead, 240 days	1214.8
DO23514	64 years, male, NA, stage:2, alive, 1290 days	1212.1
DO48751	68 years, male, NA, stage:2, dead, 480 days	1208.6
DO45263	67 years, male, NA, stage:3, dead, 270 days	1208.5
DO45141	73 years, male, NA, stage:2, alive, 1320 days	1204.2
DO45179	78 years, female, NA, stage:2, alive, 600 days	1201.1
DO45191	61 years, female, NA, stage:2, alive, 1200 days	1194.7
DO48700	78 years, female, NA, stage:2, alive, 810 days	1175.0
DO45283	60 years, male, NA, stage:3, alive, 510 days	1142.9
DO48736	76 years, female, NA, stage:1, alive, 600 days	1140.6
DO45095	66 years, male, NA, stage:2, alive, 1620 days	1132.5
DO48733	72 years, male, NA, stage:2, alive, 600 days	1116.7
DO45231	84 years, male, NA, stage:2, alive, 930 days	1107.9
DO45159	65 years, male, NA, stage:3, alive, 1470 days	1077.9
DO50791	79 years, female, NA, stage:1, dead, 480 days	1076.8
DO50813	56 years, male, NA, stage:2, alive, 420 days	1071.1
DO50809	56 years, male, NA, stage:3, dead, 720 days	1066.3
DO48761	55 years, male, NA, stage:2, alive, 870 days	1058.9
DO45161	74 years, male, NA, stage:2, dead, 540 days	1055.5
DO45131	53 years, male, NA, stage:4, dead, 360 days	1049.8
DO45273	62 years, male, NA, stage:2, alive, 480 days	1047.8
DO50820	77 years, female, NA, stage:3, alive, 510 days	1032.0
DO48732	73 years, male, NA, stage:3, alive, 630 days	1030.7
DO50776	75 years, male, NA, stage:1, alive, 690 days	1025.7
DO23528	45 years, female, NA, stage:2, alive, 1020 days	1013.1
DO45119	74 years, male, NA, stage:3, dead, 510 days	1004.8
DO23515	71 years, male, NA, stage:2, alive, 1230 days	1002.9
DO50818	65 years, male, NA, stage:2, alive, 510 days	998.8
DO45157	62 years, male, NA, stage:2, alive, 1980 days	998.0
DO45099	46 years, male, NA, stage:3, alive, 1590 days	991.9
DO23524	71 years, female, NA, stage:2, alive, 1050 days	988.6
DO45103	47 years, male, NA, stage:3, alive, 450 days	985.9
DO45092	62 years, male, NA, stage:4, dead, 1200 days	978.9
DO48759	73 years, male, NA, stage:3, alive, 720 days	978.3
DO45153	77 years, female, NA, stage:2, alive, 1380 days	975.4
DO45267	73 years, male, NA, stage:3, dead, 570 days	974.2
DO45269	59 years, male, NA, stage:3, alive, 750 days	970.7
DO50815	62 years, male, NA, stage:3, alive, 150 days	967.1
DO45127	73 years, male, NA, stage:3, dead, 420 days	963.3
DO23521	63 years, male, NA, stage:3, alive, 1110 days	948.9
DO50855	47 years, male, NA, stage:2, alive, 570 days	948.7
DO45217	69 years, female, NA, stage:3, dead, 270 days	947.8
DO48730	73 years, female, NA, stage:2, alive, 630 days	938.1
DO45121	61 years, male, NA, stage:3, alive, 1530 days	926.9
DO45135	77 years, male, NA, stage:1, alive, 1410 days	922.7
DO45221	75 years, female, NA, stage:4, dead, 390 days	921.9
DO23548	78 years, female, NA, stage:1, alive, 840 days	908.1
DO45177	81 years, female, NA, stage:3, alive, 1260 days	896.6
DO48712	50 years, male, NA, stage:2, alive, 810 days	886.0
DO45261	74 years, male, NA, stage:3, alive, 990 days	873.3
DO23542	66 years, male, NA, stage:3, alive, 960 days	859.9
DO50785	37 years, male, NA, stage:4, dead, 90 days	855.5
DO45233	83 years, male, NA, stage:3, alive, 900 days	854.2
DO45255	81 years, male, NA, stage:3, alive, 720 days	851.6
DO50811	62 years, male, NA, stage:1, alive, 450 days	841.3
DO48741	64 years, male, NA, stage:3, alive, 240 days	835.3
DO45181	84 years, female, NA, stage:2, alive, 1200 days	835.1
DO227801	77 years, female, NA, stage:1, alive, 660 days	834.4
DO23516	69 years, male, NA, stage:3, dead, 20 days	833.0
DO45219	78 years, male, NA, stage:2, alive, 1080 days	832.1
DO45093	71 years, male, NA, stage:2, dead, 720 days	824.8
DO23529	72 years, male, NA, stage:4, alive, 930 days	820.0
DO50822	66 years, male, NA, stage:2, alive, 510 days	807.5
DO45213	58 years, male, NA, stage:1, alive, 1200 days	803.1
DO45203	71 years, female, NA, stage:2, alive, 1170 days	798.4
DO48760	70 years, female, NA, stage:2, alive, 690 days	788.7
DO48719	80 years, male, NA, stage:2, alive, 690 days	787.7
DO50783	62 years, male, NA, stage:3, alive, 480 days	785.5
DO50825	70 years, male, NA, stage:2, alive, 390 days	783.3
DO23510	80 years, female, NA, stage:2, alive, 870 days	778.8
DO50839	47 years, female, NA, stage:3, alive, 330 days	775.1
DO45265	73 years, male, NA, stage:3, alive, 1020 days	769.6
DO45165	75 years, male, NA, stage:2, alive, 690 days	767.7
DO45199	86 years, female, NA, stage:2, alive, 1350 days	765.7
DO45094	76 years, male, NA, stage:3, alive, 1650 days	763.2
DO50804	81 years, male, NA, stage:2, alive, 720 days	762.5
DO45225	69 years, male, NA, stage:1, alive, 1050 days	756.0
DO45109	63 years, male, NA, stage:2, alive, 1590 days	754.4
DO23537	79 years, male, NA, stage:2, dead, 900 days	744.4
DO45115	81 years, male, NA, stage:2, alive, 840 days	743.3
DO48723	73 years, male, NA, stage:1, alive, 600 days	739.2
DO45215	65 years, male, NA, stage:2, alive, 1170 days	731.5
DO45227	57 years, female, NA, stage:2, alive, 1020 days	730.8
DO45171	56 years, male, NA, stage:3, alive, 600 days	728.3
DO45189	85 years, female, NA, stage:2, alive, 1200 days	721.2
DO23543	63 years, male, NA, stage:2, alive, 1020 days	719.8
DO23541	65 years, male, NA, stage:2, alive, 930 days	711.9
DO50857	72 years, male, NA, stage:2, alive, 210 days	709.2
DO48693	71 years, male, NA, stage:2, alive, 900 days	707.4
DO48679	72 years, male, NA, stage:2, alive, 1200 days	703.3
DO45129	61 years, male, NA, stage:3, alive, 1470 days	700.2
DO45235	68 years, female, NA, stage:1, alive, 900 days	699.6
DO45187	32 years, female, NA, stage:1, alive, 1260 days	695.4
DO45247	31 years, female, NA, stage:2, alive, 210 days	693.5
DO45281	83 years, male, NA, stage:4, alive, 750 days	691.8
DO48742	76 years, male, NA, stage:2, alive, 600 days	688.0
DO50787	63 years, male, NA, stage:3, alive, 480 days	685.1
DO23544	67 years, male, NA, stage:2, alive, 960 days	680.8
DO23550	69 years, male, NA, stage:1, alive, 990 days	671.9
DO45243	74 years, female, NA, stage:3, alive, 930 days	665.6
DO45207	68 years, male, NA, stage:1, alive, 1050 days	663.0
DO23545	67 years, male, NA, stage:2, dead, 570 days	663.0
DO48725	66 years, male, NA, stage:1, alive, 780 days	661.0
DO50859	77 years, male, NA, stage:2, alive, 180 days	657.0
DO50793	76 years, male, NA, stage:4, alive, 540 days	656.7
DO50844	75 years, male, NA, stage:4, alive, 300 days	654.9
DO48701	78 years, male, NA, stage:2, alive, 780 days	654.8
DO45239	42 years, male, NA, stage:2, alive, 870 days	647.7
DO48682	72 years, female, NA, stage:3, dead, 120 days	642.1
DO50803	62 years, female, NA, stage:1, alive, 540 days	642.1
DO45096	69 years, male, NA, stage:2, dead, 1290 days	641.8
DO50840	49 years, male, NA, stage:2, alive, 330 days	640.1
DO23527	72 years, male, NA, stage:1, alive, 1050 days	636.4
DO50832	73 years, male, NA, stage:3, alive, 90 days	625.1
DO48757	68 years, female, NA, stage:3, alive, 480 days	623.1
DO50808	68 years, male, NA, stage:2, alive, 570 days	622.5
DO48715	58 years, female, NA, stage:2, dead, 690 days	620.3
DO50798	77 years, male, NA, stage:3, dead, 30 days	618.5
DO23536	56 years, male, NA, stage:2, alive, 930 days	605.9
DO23551	73 years, male, NA, stage:3, dead, 150 days	605.3
DO48743	69 years, female, NA, stage:2, alive, 570 days	600.9
DO45193	68 years, female, NA, stage:4, dead, 120 days	600.6
DO45143	69 years, male, NA, stage:3, alive, 1290 days	600.3
DO45237	58 years, male, NA, stage:2, alive, 900 days	596.2
DO50774	68 years, female, NA, stage:2, alive, 720 days	589.3
DO23552	80 years, female, NA, stage:1, alive, 810 days	584.9
DO45223	67 years, male, NA, stage:4, alive, 1020 days	581.4
DO48674	80 years, male, NA, stage:2, alive, 1260 days	580.9
DO23518	67 years, male, NA, stage:2, alive, 1320 days	580.1
DO23540	73 years, male, NA, stage:1, alive, 750 days	579.8
DO50817	75 years, male, NA, stage:2, alive, 390 days	574.5
DO45137	38 years, male, NA, stage:1, alive, 1320 days	574.4
DO45101	63 years, male, NA, stage:2, alive, 1680 days	561.4
DO45201	49 years, male, NA, stage:1, alive, 900 days	558.8
DO48681	57 years, male, NA, stage:2, alive, 900 days	550.8
DO48677	58 years, male, NA, stage:3, alive, 1140 days	542.6
DO23511	83 years, female, NA, stage:3, dead, 180 days	533.2
DO23546	63 years, male, NA, stage:2, alive, 1050 days	533.0
DO48721	58 years, female, NA, stage:1, alive, 900 days	528.8
DO23509	60 years, male, NA, stage:3, dead, 780 days	528.5
DO45105	61 years, male, NA, stage:1, alive, 1680 days	526.7
DO48704	68 years, female, NA, stage:3, alive, 750 days	526.5
DO23513	76 years, male, NA, stage:3, alive, 1200 days	525.3
DO45167	67 years, male, NA, stage:2, dead, 1440 days	523.6
DO45107	63 years, female, NA, stage:2, alive, 1710 days	510.5
DO48716	71 years, male, NA, stage:2, alive, 720 days	509.3
DO23531	78 years, female, NA, stage:3, alive, 900 days	506.5
DO45097	69 years, male, NA, stage:3, alive, 1620 days	494.5
DO48672	81 years, male, NA, stage:2, alive, 450 days	494.4
DO45195	62 years, male, NA, stage:1, alive, 390 days	493.4
DO45241	49 years, male, NA, stage:1, alive, 1080 days	488.9
DO45229	74 years, male, NA, stage:1, alive, 990 days	488.1
DO23539	77 years, male, NA, stage:1, alive, 1110 days	487.6
DO45091	56 years, male, NA, stage:2, dead, 1320 days	476.4
DO50816	63 years, male, NA, stage:2, alive, 390 days	464.7
DO50845	72 years, male, NA, stage:3, alive, 210 days	463.9
DO45123	78 years, female, NA, stage:2, dead, 570 days	463.6
DO45125	58 years, male, NA, stage:3, alive, 1680 days	459.3
DO23534	60 years, male, NA, stage:2, alive, 840 days	457.4
DO45253	50 years, male, NA, stage:2, alive, 870 days	453.7
DO48746	76 years, male, NA, stage:3, alive, 570 days	452.9
DO50807	67 years, male, NA, stage:1, alive, 540 days	448.9
DO50850	74 years, male, NA, stage:3, alive, 720 days	446.2
DO45113	58 years, male, NA, stage:3, alive, 1560 days	444.3
DO23538	67 years, male, NA, stage:2, alive, 450 days	441.1
DO45117	73 years, female, NA, stage:2, dead, 1110 days	433.2
DO50789	73 years, female, NA, stage:2, alive, 570 days	424.7
DO45149	70 years, female, NA, stage:2, alive, 1260 days	414.4
DO227643	79 years, male, NA, stage:2, alive, 1260 days	408.8
DO45197	51 years, male, NA, stage:2, alive, 1170 days	401.5
DO48706	72 years, male, NA, stage:2, alive, 870 days	394.0
DO23512	60 years, male, NA, stage:1, alive, 1260 days	389.0
DO23533	61 years, male, NA, stage:2, alive, 900 days	378.4
DO48727	81 years, female, NA, stage:2, dead, 390 days	377.4
DO45133	64 years, male, NA, stage:3, dead, 660 days	362.7
DO23532	71 years, female, NA, stage:1, alive, 960 days	361.5
DO45169	74 years, male, NA, stage:3, alive, 1350 days	353.3
DO50814	83 years, male, NA, stage:3, alive, 420 days	351.7
DO23517	62 years, male, NA, stage:2, alive, 1200 days	347.7
DO45163	76 years, male, NA, stage:2, alive, 960 days	319.2
DO45111	74 years, male, NA, stage:2, alive, 1590 days	313.9
DO45175	74 years, male, NA, stage:2, alive, 1140 days	302.6
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
815	Tumor	0.6
131	Tumor	0.5
713	Tumor	0.4
917	Tumor	0.4
283	Tumor	0.4
1031	Tumor	0.4
516	Normal	0.4
778	Normal	0.4
1043	Tumor	0.4
447	Tumor	0.3
227	Tumor	0.3
363	Tumor	0.3
492	Normal	0.3
728	Normal	0.3
738	Normal	0.3
966	Normal	0.3
545	Tumor	0.3
211	Tumor	0.3
518	Normal	0.3
478	Normal	0.3
327	Tumor	0.3
416	Normal	0.3
472	Normal	0.3
482	Normal	0.3
952	Normal	0.3
982	Normal	0.3
824	Normal	0.2
1016	Normal	0.2
212	Normal	0.2
425	Tumor	0.2
413	Tumor	0.2
858	Normal	0.2
524	Normal	0.2
498	Normal	0.2
188	Normal	0.2
434	Normal	0.2
714	Normal	0.2
528	Normal	0.2
981	Tumor	0.2
755	Tumor	0.2
814	Normal	0.2
553	Tumor	0.2
538	Normal	0.2
916	Normal	0.2
1042	Normal	0.2
723	Tumor	0.2
756	Normal	0.2
851	Tumor	0.2
698	Normal	0.2
978	Normal	0.2
956	Normal	0.2
696	Normal	0.2
223	Tumor	0.2
926	Normal	0.2
1028	Normal	0.2
1026	Normal	0.2
412	Normal	0.2
546	Normal	0.2
874	Normal	0.2
488	Normal	0.2
484	Normal	0.2
1022	Normal	0.2
722	Normal	0.2
866	Normal	0.2
514	Normal	0.2
975	Tumor	0.2
746	Normal	0.2
924	Normal	0.2
742	Normal	0.2
364	Normal	0.2
285	Tumor	0.2
481	Tumor	0.2
272	Normal	0.2
432	Normal	0.2
462	Normal	0.2
818	Normal	0.2
955	Tumor	0.1
976	Normal	0.1
943	Tumor	0.1
816	Normal	0.1
852	Normal	0.1
262	Normal	0.1
865	Tumor	0.1
536	Normal	0.1
268	Normal	0.1
813	Tumor	0.1
724	Normal	0.1
362	Normal	0.1
918	Normal	0.1
428	Normal	0.1
914	Normal	0.1
862	Normal	0.1
436	Normal	0.1
284	Normal	0.1
224	Normal	0.1
474	Normal	0.1
721	Tumor	0.1
877	Tumor	0.1
126	Normal	0.1
162	Normal	0.1
661	Tumor	0.1
964	Normal	0.1
386	Normal	0.1
228	Normal	0.1
786	Normal	0.1
864	Normal	0.1
356	Normal	0.1
366	Normal	0.1
686	Normal	0.1
464	Normal	0.1
515	Tumor	0.1
744	Normal	0.1
1044	Normal	0.1
878	Normal	0.1
424	Normal	0.1
286	Normal	0.1
882	Normal	0.1
111	Normal	0.1
298	Normal	0.1
142	Normal	0.1
984	Normal	0.1
695	Tumor	0.1
968	Normal	0.1
146	Normal	0.1
311	Tumor	0.1
196	Normal	0.1
716	Normal	0.1
628	Normal	0.1
414	Normal	0.1
526	Normal	0.1
868	Normal	0.1
328	Normal	0.1
125	Tumor	0.1
312	Normal	0.1
467	Tumor	0.1
394	Normal	0.1
873	Tumor	0.1
954	Normal	0.1
456	Normal	0.1
662	Normal	0.0
145	Tumor	0.0
938	Normal	0.0
136	Normal	0.0
444	Normal	0.0
494	Normal	0.0
491	Tumor	0.0
534	Normal	0.0
415	Tumor	0.0
727	Tumor	0.0
138	Normal	0.0
392	Normal	0.0
455	Tumor	0.0
1032	Normal	0.0
664	Normal	0.0
222	Normal	0.0
1014	Normal	0.0
958	Normal	0.0
558	Normal	0.0
422	Normal	0.0
368	Normal	0.0
466	Normal	0.0
376	Normal	0.0
448	Normal	0.0
128	Normal	0.0
148	Normal	0.0
1046	Normal	0.0
922	Normal	0.0
554	Normal	0.0
358	Normal	0.0
497	Tumor	0.0
218	Normal	0.0
258	Normal	0.0
944	Normal	0.0
278	Normal	0.0
446	Normal	0.0
737	Tumor	0.0
957	Tumor	0.0
648	Normal	0.0
217	Tumor	0.0
172	Normal	0.0
431	Tumor	0.0
221	Tumor	0.0
352	Normal	0.0
963	Tumor	0.0
715	Tumor	0.0
881	Tumor	0.0
192	Normal	0.0
384	Normal	0.0
574	Normal	0.0
426	Normal	0.0
186	Normal	0.0
132	Normal	0.0
618	Normal	0.0
517	Tumor	0.0
564	Normal	0.0
214	Normal	0.0
344	Normal	0.0
314	Normal	0.0
396	Normal	-0.1
114	Normal	-0.1
195	Tumor	-0.1
636	Normal	-0.1
642	Normal	-0.1
388	Normal	-0.1
385	Tumor	-0.1
523	Tumor	-0.1
983	Tumor	-0.1
823	Tumor	-0.1
332	Normal	-0.1
921	Tumor	-0.1
342	Normal	-0.1
937	Tumor	-0.1
884	Normal	-0.1
857	Tumor	-0.1
915	Tumor	-0.1
616	Normal	-0.1
666	Normal	-0.1
213	Tumor	-0.1
697	Tumor	-0.1
468	Normal	-0.1
232	Normal	-0.1
185	Tumor	-0.1
461	Tumor	-0.1
135	Tumor	-0.1
537	Tumor	-0.1
421	Tumor	-0.1
572	Normal	-0.2
617	Tumor	-0.2
525	Tumor	-0.2
124	Normal	-0.2
563	Tumor	-0.2
452	Normal	-0.2
527	Tumor	-0.2
297	Tumor	-0.2
535	Tumor	-0.2
493	Tumor	-0.2
383	Tumor	-0.2
343	Tumor	-0.2
817	Tumor	-0.2
923	Tumor	-0.2
573	Tumor	-0.2
463	Tumor	-0.2
354	Normal	-0.2
672	Normal	-0.2
355	Tumor	-0.2
861	Tumor	-0.2
113	Tumor	-0.2
471	Tumor	-0.2
568	Normal	-0.2
141	Tumor	-0.2
375	Tumor	-0.2
261	Tumor	-0.2
191	Tumor	-0.2
1015	Tumor	-0.2
912	Normal	-0.2
925	Tumor	-0.2
187	Tumor	-0.2
1025	Tumor	-0.2
883	Tumor	-0.2
641	Tumor	-0.3
777	Tumor	-0.3
557	Tumor	-0.3
483	Tumor	-0.3
277	Tumor	-0.3
671	Tumor	-0.3
1021	Tumor	-0.3
785	Tumor	-0.3
411	Tumor	-0.3
1013	Tumor	-0.3
365	Tumor	-0.3
137	Tumor	-0.3
951	Tumor	-0.3
867	Tumor	-0.3
331	Tumor	-0.3
913	Tumor	-0.3
477	Tumor	-0.3
745	Tumor	-0.3
1027	Tumor	-0.4
1045	Tumor	-0.4
451	Tumor	-0.4
391	Tumor	-0.4
513	Tumor	-0.4
367	Tumor	-0.4
147	Tumor	-0.4
351	Tumor	-0.4
635	Tumor	-0.4
685	Tumor	-0.4
271	Tumor	-0.4
353	Tumor	-0.4
433	Tumor	-0.4
953	Tumor	-0.4
567	Tumor	-0.4
161	Tumor	-0.4
977	Tumor	-0.4
663	Tumor	-0.4
743	Tumor	-0.5
112	Tumor	-0.5
395	Tumor	-0.5
387	Tumor	-0.5
665	Tumor	-0.5
967	Tumor	-0.5
423	Tumor	-0.5
361	Tumor	-0.5
465	Tumor	-0.5
911	Tumor	-0.5
443	Tumor	-0.5
741	Tumor	-0.5
341	Tumor	-0.5
435	Tumor	-0.5
571	Tumor	-0.5
487	Tumor	-0.6
863	Tumor	-0.6
257	Tumor	-0.6
427	Tumor	-0.6
313	Tumor	-0.6
615	Tumor	-0.6
127	Tumor	-0.6
393	Tumor	-0.6
647	Tumor	-0.6
965	Tumor	-0.6
627	Tumor	-0.7
1041	Tumor	-0.7
445	Tumor	-0.7
171	Tumor	-0.8
123	Tumor	-0.8
533	Tumor	-0.8
473	Tumor	-0.8
267	Tumor	-0.8
357	Tumor	-0.9
231	Tumor	-0.9
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody CAB037134	Antibody CAB037140
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma