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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:73.4 nTPM
FANTOM5:66.4 Scaled Tags Per Million
Pig:49.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA026483
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 73.4
Samples: 246

Max nTPM: 142.0
Min nTPM: 42.1
Std nTPM: 14.8
Median nTPM: 71.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 142.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 127.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 126.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 124.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 122.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 122.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 121.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 113.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 109.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 105.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 105.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 103.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 102.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 100.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 100.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 96.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 95.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 94.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 94.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 93.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 91.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 90.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 89.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 89.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 89.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 88.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 88.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 87.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 87.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 87.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 86.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 86.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 85.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 85.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 85.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 84.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 84.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 84.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 84.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 83.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 83.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 83.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 83.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 83.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 82.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 82.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 82.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 82.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 82.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 82.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 81.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 81.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 81.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 80.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 80.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 80.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 80.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 80.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 79.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 79.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 79.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 79.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 79.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 79.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 78.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 78.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 78.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 78.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 78.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 77.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 77.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 77.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 77.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 77.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 76.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 76.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 76.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 76.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 76.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 76.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 76.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 75.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 75.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 75.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 75.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 75.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 75.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 75.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 75.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 75.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 74.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 74.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 74.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 74.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 74.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 73.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 73.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 73.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 73.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 73.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 73.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 73.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 73.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 73.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 73.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 73.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 73.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 72.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 72.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 72.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 72.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 71.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 71.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 71.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 71.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 71.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 71.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 71.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 71.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 71.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 71.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 71.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 71.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 70.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 70.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 70.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 70.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 70.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 70.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 70.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 70.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 70.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 70.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 70.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 70.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 70.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 69.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 69.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 69.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 69.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 69.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 69.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 69.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 69.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 69.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 69.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 68.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 68.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 68.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 68.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 68.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 68.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 68.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 68.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 68.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 68.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 67.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 67.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 67.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 67.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 67.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 67.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 67.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 67.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 66.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 66.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 66.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 66.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 66.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 66.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 65.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 65.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 65.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 65.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 65.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 65.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 65.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 65.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 65.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 65.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 64.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 64.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 63.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 63.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 63.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 63.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 62.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 62.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 62.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 62.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 62.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 62.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 62.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 61.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 61.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 61.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 61.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 61.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 61.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 61.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 60.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 60.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 60.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 60.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 60.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 59.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 59.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 59.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 59.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 59.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 59.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 59.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 59.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 58.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 58.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 58.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 57.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 57.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 57.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 57.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 57.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 56.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 56.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 56.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 55.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 55.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 55.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 54.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 54.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 54.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 53.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 53.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 52.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 51.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 49.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 49.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 48.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 46.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 43.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 42.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

66.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 66.4
FF:10164-103B2 76 years, female 66.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.6
Pig sample Sample description nTPM
Caudate
nTPM: 49.6
Samples: 4

Max nTPM: 59.2
Min nTPM: 44.8
Sample A Female 44.8
Sample B Female 48.3
Sample C Male 59.2
Sample D Male 46.0

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