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ICAM2
HPA
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  • ICAM2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ICAM2
Synonyms CD102
Gene descriptioni

Full gene name according to HGNC.

Intercellular adhesion molecule 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

CD markers
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q23.3
Chromosome location (bp) 64002594 - 64020634
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000108622 (version 109)
Entrez gene 3384
HGNC HGNC:5345
UniProt P13598 (UniProt - Evidence at protein level)
neXtProt NX_P13598
GeneCards ICAM2
Antibodypedia ICAM2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

ICAM proteins are ligands for the leukocyte adhesion protein LFA-1 (integrin alpha-L/beta-2). ICAM2 may play a role in lymphocyte recirculation by blocking LFA-1-dependent cell adhesion. It mediates adhesive interactions important for antigen-specific immune response, NK-cell mediated clearance, lymphocyte recirculation, and other cellular interactions important for immune response and surveillance.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell adhesion
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a member of the intercellular adhesion molecule (ICAM) family. All ICAM proteins are type I transmembrane glycoproteins, contain 2-9 immunoglobulin-like C2-type domains, and bind to the leukocyte adhesion LFA-1 protein. This protein may play a role in lymphocyte recirculation by blocking LFA-1-dependent cell adhesion. It mediates adhesive interactions important for antigen-specific immune response, NK-cell mediated clearance, lymphocyte recirculation, and other cellular interactions important for immune response and surveillance. Several transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ICAM2-201
ENSP00000415283
ENST00000412356
P13598
[Direct mapping] Intercellular adhesion molecule 2
Show all
Q6FHE2
[Target identity:100%; Query identity:100%] ICAM2 protein; Intercellular adhesion molecule 2; Intercellular adhesion molecule 2 variant; Intercellular adhesion molecule 2, isoform CRA_a
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005178 [integrin binding]
GO:0005886 [plasma membrane]
GO:0005902 [microvillus]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0032154 [cleavage furrow]
GO:0042995 [cell projection]
GO:0098609 [cell-cell adhesion]
GO:0110165 [cellular anatomical entity]
Show all
275 aa
30.7 kDa
Yes 1
ICAM2-202
ENSP00000388666
ENST00000418105
P13598
[Direct mapping] Intercellular adhesion molecule 2
Show all
Q6FHE2
[Target identity:100%; Query identity:100%] ICAM2 protein; Intercellular adhesion molecule 2; Intercellular adhesion molecule 2 variant; Intercellular adhesion molecule 2, isoform CRA_a
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005178 [integrin binding]
GO:0005886 [plasma membrane]
GO:0005902 [microvillus]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0032154 [cleavage furrow]
GO:0042995 [cell projection]
GO:0098609 [cell-cell adhesion]
GO:0110165 [cellular anatomical entity]
Show all
275 aa
30.7 kDa
Yes 1
ICAM2-203
ENSP00000392634
ENST00000449662
P13598
[Direct mapping] Intercellular adhesion molecule 2
Show all
Q6FHE2
[Target identity:100%; Query identity:100%] ICAM2 protein; Intercellular adhesion molecule 2; Intercellular adhesion molecule 2 variant; Intercellular adhesion molecule 2, isoform CRA_a
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005178 [integrin binding]
GO:0005886 [plasma membrane]
GO:0005902 [microvillus]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0032154 [cleavage furrow]
GO:0042995 [cell projection]
GO:0098609 [cell-cell adhesion]
GO:0110165 [cellular anatomical entity]
Show all
275 aa
30.7 kDa
Yes 1
ICAM2-204
ENSP00000464331
ENST00000578313
J3QRQ1
[Direct mapping] Intercellular adhesion molecule 2
Show all
   MEMSAT3 predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005178 [integrin binding]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0098609 [cell-cell adhesion]
GO:0110165 [cellular anatomical entity]
Show all
216 aa
24 kDa
Yes 0
ICAM2-205
ENSP00000463199
ENST00000578379
J3QKR4
[Direct mapping] Intercellular adhesion molecule 2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005178 [integrin binding]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0098609 [cell-cell adhesion]
Show all
174 aa
19.5 kDa
No 1
ICAM2-206
ENSP00000464372
ENST00000578892
J3QRT5
[Direct mapping] Intercellular adhesion molecule 2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005178 [integrin binding]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0098609 [cell-cell adhesion]
GO:0110165 [cellular anatomical entity]
Show all
251 aa
28.2 kDa
Yes 1
ICAM2-207
ENSP00000462579
ENST00000579687
P13598
[Direct mapping] Intercellular adhesion molecule 2
Show all
Q6FHE2
[Target identity:100%; Query identity:100%] ICAM2 protein; Intercellular adhesion molecule 2; Intercellular adhesion molecule 2 variant; Intercellular adhesion molecule 2, isoform CRA_a
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005178 [integrin binding]
GO:0005886 [plasma membrane]
GO:0005902 [microvillus]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0032154 [cleavage furrow]
GO:0042995 [cell projection]
GO:0098609 [cell-cell adhesion]
GO:0110165 [cellular anatomical entity]
Show all
275 aa
30.7 kDa
Yes 1
ICAM2-208
ENSP00000464665
ENST00000579788
P13598
[Direct mapping] Intercellular adhesion molecule 2
Show all
Q6FHE2
[Target identity:100%; Query identity:100%] ICAM2 protein; Intercellular adhesion molecule 2; Intercellular adhesion molecule 2 variant; Intercellular adhesion molecule 2, isoform CRA_a
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0001931 [uropod]
GO:0005178 [integrin binding]
GO:0005886 [plasma membrane]
GO:0005902 [microvillus]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0032154 [cleavage furrow]
GO:0042995 [cell projection]
GO:0071944 [cell periphery]
GO:0098609 [cell-cell adhesion]
GO:0110165 [cellular anatomical entity]
Show all
275 aa
30.7 kDa
Yes 1
ICAM2-213
ENSP00000463945
ENST00000583366
J3QQX6
[Direct mapping] Intercellular adhesion molecule 2
Show all
   MEMSAT3 predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005178 [integrin binding]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0098609 [cell-cell adhesion]
GO:0110165 [cellular anatomical entity]
Show all
214 aa
23.7 kDa
Yes 0
ICAM2-215
ENSP00000463862
ENST00000584084
J3QQR8
[Direct mapping] Intercellular adhesion molecule 2
Show all
   MEMSAT3 predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005178 [integrin binding]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0098609 [cell-cell adhesion]
GO:0110165 [cellular anatomical entity]
Show all
166 aa
18.4 kDa
Yes 0

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