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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:113.5 nTPM
HPA Brain:90.2 nTPM
GTEx:113.5 nTPM
FANTOM5:46.5 Scaled Tags Per Million
Pig:36.4 nTPM
Mouse:46.5 nTPM
Allen mouse:6.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA009672Antibody HPA027247Antibody CAB001962
Glial cells LowNot detectedNot detected
Neuronal cells Not detectedNot detectedHigh







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 83.7
2481 Female, age 94, left hemisphere 121.1
2289 Male, age 61, right hemisphere 96.4
2290 Female, age 72, unknown 79.9
1857 Female, age 85, left hemisphere 78.9
1781 Male, age 74, unknown 78.3
1854 Male, age 80, left hemisphere 76.1
2288 Male, age 75, left hemisphere 75.0
2846 Female, age 79, unknown 64.1
Globus pallidus, externus
nTPM: 90.2
2646 Male, age 61, right hemisphere 142.0
1996 Male, age 80, right hemisphere 96.2
2772 Female, age 79, unknown 80.6
2567 Female, age 72, unknown 76.5
2395 Male, age 75, both hemispheres 55.6
Globus pallidus, internus
nTPM: 82.6
2111 Female, age 85, right hemisphere 93.6
2483 Female, age 94, right hemisphere 93.1
2037 Male, age 80, right hemisphere 83.0
1818 Male, age 74, unknown 79.4
2778 Female, age 91, both hemispheres 78.9
2566 Female, age 72, unknown 75.8
2287 Male, age 75, right hemisphere 74.1
Nucleus accumbens
nTPM: 67.6
2286 Male, age 75, left hemisphere 90.8
1806 Female, age 85, left hemisphere 82.7
2391 Female, age 94, left hemisphere 76.5
1783 Male, age 74, unknown 64.8
2732 Male, age 80, right hemisphere 63.1
2824 Male, age 61, right hemisphere 59.8
2698 Female, age 72, unknown 58.8
1856 Female, age 91, right hemisphere 44.1
Nucleus basalis of Meynert
nTPM: 83.3
2569 Male, age 61, both hemispheres 149.5
2484 Female, age 94, left hemisphere 73.6
2821 Male, age 75, both hemispheres 55.6
2393 Male, age 80, right hemisphere 54.7
Nucleus of the diagonal band
nTPM: 45.6
1812 Female, age 91, both hemispheres 51.9
1979 Male, age 74, unknown 50.4
2195 Female, age 85, both hemispheres 44.5
2775 Male, age 80, right hemisphere 42.3
2029 Male, age 61, right hemisphere 39.0
Putamen
nTPM: 72.5
2489 Female, age 72, unknown 91.6
2482 Female, age 94, left hemisphere 91.1
2647 Male, age 75, left hemisphere 88.1
1829 Male, age 74, unknown 67.5
2466 Female, age 79, unknown 63.8
1838 Male, age 80, right hemisphere 55.5
1937 Female, age 91, right hemisphere 50.1
Septal nuclei
nTPM: 52.8
2059 Female, age 85, both hemispheres 69.7
2199 Male, age 80, right hemisphere 69.2
2394 Male, age 61, left hemisphere 60.4
1960 Male, age 74, unknown 47.5
2009 Female, age 91, both hemispheres 43.7
2629 Female, age 94, right hemisphere 39.9
2031 Female, age 72, unknown 39.2
Stria terminalis, bed nucleus
nTPM: 43.1
2201 Male, age 74, unknown 46.5
1974 Female, age 91, both hemispheres 44.8
2486 Female, age 94, both hemispheres 37.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 95.8
Samples: 246

Max nTPM: 285.0
Min nTPM: 17.5
Std nTPM: 47.4
Median nTPM: 86.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 285.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 278.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 264.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 263.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 239.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 238.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 219.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 208.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 205.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 195.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 194.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 192.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 190.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 180.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 179.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 175.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 173.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 172.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 170.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 169.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 165.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 165.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 161.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 160.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 159.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 158.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 157.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 153.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 152.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 152.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 152.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 151.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 150.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 150.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 146.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 145.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 144.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 142.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 141.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 140.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 140.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 135.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 134.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 134.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 129.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 128.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 127.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 126.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 126.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 125.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 125.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 125.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 123.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 122.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 122.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 121.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 118.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 117.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 117.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 116.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 114.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 114.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 114.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 113.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 113.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 113.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 112.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 111.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 111.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 111.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 109.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 109.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 109.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 108.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 108.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 108.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 107.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 107.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 106.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 106.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 105.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 105.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 104.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 103.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 102.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 102.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 102.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 102.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 102.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 101.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 100.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 98.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 98.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 98.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 97.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 96.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 95.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 95.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 95.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 93.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 93.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 92.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 92.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 92.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 92.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 91.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 91.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 91.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 90.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 89.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 89.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 89.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 89.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 89.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 88.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 88.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 88.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 88.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 87.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 87.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 87.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 87.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 86.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 85.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 85.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 85.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 83.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 83.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 83.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 83.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 83.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 82.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 81.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 81.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 81.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 79.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 78.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 78.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 78.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 77.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 77.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 76.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 76.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 76.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 76.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 76.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 75.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 74.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 73.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 73.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 73.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 72.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 72.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 71.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 71.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 71.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 71.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 71.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 70.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 69.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 69.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 69.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 68.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 67.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 67.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 67.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 66.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 66.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 66.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 66.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 66.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 66.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 65.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 65.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 65.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 65.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 65.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 65.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 64.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 64.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 63.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 63.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 63.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 63.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 62.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 62.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 61.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 60.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 59.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 58.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 58.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 58.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 57.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 57.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 57.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 57.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 57.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 57.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 56.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 56.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 55.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 55.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 55.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 54.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 54.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 54.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 53.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 52.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 52.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 52.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 52.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 51.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 51.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 50.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 50.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 50.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 50.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 50.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 49.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 49.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 48.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 48.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 48.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 48.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 48.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 48.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 47.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 44.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 43.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 43.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 43.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 39.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 38.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 37.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 37.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 32.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 28.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 28.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 27.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 26.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 25.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 17.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 69.0
Samples: 246

Max nTPM: 224.6
Min nTPM: 15.4
Std nTPM: 36.2
Median nTPM: 58.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 224.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 199.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 183.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 179.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 179.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 163.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 158.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 156.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 154.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 150.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 150.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 144.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 143.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 137.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 137.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 135.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 132.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 129.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 128.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 127.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 126.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 125.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 125.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 125.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 124.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 122.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 122.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 122.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 121.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 120.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 117.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 114.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 111.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 111.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 111.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 110.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 110.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 110.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 109.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 108.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 104.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 103.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 102.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 102.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 101.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 99.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 99.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 97.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 96.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 96.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 95.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 95.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 93.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 92.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 86.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 84.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 84.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 84.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 83.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 82.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 82.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 82.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 81.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 80.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 80.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 79.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 79.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 79.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 79.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 76.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 76.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 76.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 75.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 75.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 74.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 74.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 73.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 73.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 73.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 73.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 72.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 72.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 72.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 71.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 71.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 71.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 71.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 71.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 71.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 69.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 69.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 69.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 68.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 67.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 66.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 66.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 66.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 65.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 65.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 65.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 64.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 64.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 64.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 64.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 62.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 62.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 62.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 62.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 62.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 61.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 61.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 61.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 61.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 60.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 59.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 59.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 59.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 59.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 59.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 58.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 58.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 58.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 58.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 58.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 57.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 57.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 57.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 57.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 56.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 56.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 56.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 56.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 56.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 56.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 56.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 56.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 55.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 55.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 55.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 54.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 54.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 54.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 54.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 53.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 53.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 53.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 53.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 53.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 53.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 53.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 53.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 51.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 51.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 51.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 50.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 50.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 50.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 50.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 50.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 50.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 50.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 50.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 49.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 49.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 48.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 48.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 48.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 48.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 48.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 47.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 47.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 46.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 46.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 46.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 46.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 46.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 45.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 45.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 44.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 44.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 44.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 43.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 43.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 42.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 42.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 42.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 42.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 41.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 41.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 41.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 41.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 41.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 40.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 40.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 40.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 40.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 40.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 39.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 39.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 39.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 38.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 38.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 38.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 38.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 38.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 38.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 38.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 37.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 37.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 37.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 37.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 37.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 37.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 36.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 35.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 35.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 35.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 35.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 35.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 34.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 34.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 34.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 33.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 33.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 33.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 33.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 33.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 33.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 32.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 31.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 31.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 31.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 30.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 30.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 29.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 28.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 28.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 28.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 25.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 25.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 25.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 23.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 23.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 22.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 22.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 15.4
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Brain - Putamen (basal ganglia)
Average nTPM: 113.5
Samples: 205

Max nTPM: 312.8
Min nTPM: 26.0
Std nTPM: 55.4
Median nTPM: 98.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 312.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 279.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 274.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 271.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 269.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 267.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 238.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 225.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 225.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 221.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 216.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 209.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 208.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 198.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 198.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 196.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 194.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 190.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 190.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 189.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 188.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 188.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 187.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 184.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 180.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 180.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 180.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 180.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 179.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 179.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 174.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 173.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 173.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 173.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 170.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 169.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 169.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 166.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 165.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 162.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 161.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 161.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 160.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 159.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 157.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 156.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 154.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 153.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 152.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 151.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 148.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 147.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 147.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 147.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 146.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 145.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 144.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 142.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 142.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 141.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 139.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 139.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 138.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 137.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 135.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 134.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 134.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 130.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 130.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 128.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 124.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 121.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 119.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 117.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 117.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 117.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 116.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 115.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 115.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 115.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 115.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 115.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 114.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 113.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 111.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 109.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 108.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 108.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 107.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 105.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 104.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 103.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 102.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 102.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 102.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 101.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 101.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 100.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 100.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 99.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 99.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 98.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 98.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 97.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 95.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 95.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 94.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 94.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 93.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 93.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 93.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 92.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 92.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 92.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 92.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 91.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 91.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 90.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 89.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 88.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 87.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 87.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 87.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 86.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 85.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 85.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 85.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 85.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 84.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 83.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 83.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 83.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 83.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 82.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 82.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 82.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 81.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 81.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 81.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 80.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 79.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 78.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 78.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 77.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 77.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 77.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 76.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 76.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 76.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 75.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 75.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 73.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 72.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 72.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 71.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 71.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 70.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 70.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 70.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 70.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 69.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 69.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 69.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 66.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 66.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 65.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 63.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 62.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 62.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 62.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 62.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 61.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 61.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 61.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 61.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 60.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 60.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 60.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 60.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 60.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 58.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 57.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 56.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 56.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 56.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 53.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 52.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 52.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 52.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 51.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 50.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 49.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 48.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 47.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 47.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 45.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 44.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 42.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 37.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 36.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 36.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 33.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 29.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 28.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 26.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

46.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 38.3
FF:10164-103B2 76 years, female 38.3
Nucleus accumbens
Scaled Tags Per Million: 23.2
FF:10037-101F1 23-56 years, mixed 23.2
Putamen
Scaled Tags Per Million: 46.5
FF:10176-103C5 60 years, female 46.5
Globus pallidus
Scaled Tags Per Million: 31.8
FF:10161-103A8 76 years, female 33.9
FF:10175-103C4 60 years, female 29.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.4
Pig sample Sample description nTPM
Caudate
nTPM: 22.6
Samples: 4

Max nTPM: 28.6
Min nTPM: 19.9
Sample A Female 21.1
Sample B Female 20.9
Sample C Male 28.6
Sample D Male 19.9
Putamen
nTPM: 36.4
Samples: 4

Max nTPM: 49.3
Min nTPM: 21.2
Sample A Female 49.3
Sample B Female 21.2
Sample C Male 35.2
Sample D Male 40.0
Septum
nTPM: 30.4
Samples: 4

Max nTPM: 43.7
Min nTPM: 25.4
Sample A Female 25.8
Sample B Female 25.4
Sample C Male 26.6
Sample D Male 43.7
Ventral pallidum
nTPM: 34.2
Samples: 4

Max nTPM: 46.9
Min nTPM: 19.3
Sample A Female 19.3
Sample B Female 32.8
Sample C Male 46.9
Sample D Male 37.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 46.5
Samples: 4

Max nTPM: 54.1
Min nTPM: 40.4
Sample A Male 42.7
Sample B Male 54.1
Sample C Female 40.4
Sample D Female 48.9
Septum
nTPM: 40.7
Samples: 4

Max nTPM: 48.2
Min nTPM: 35.6
Sample A Male 35.6
Sample B Male 48.2
Sample C Female 38.9
Sample D Female 39.9
Ventral forebrain
nTPM: 44.4
Samples: 4

Max nTPM: 52.1
Min nTPM: 39.4
Sample A Male 46.4
Sample B Male 39.6
Sample C Female 52.1
Sample D Female 39.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.6
69874066 Antisense, RP_050512_02_F01, Mouse strain C57BL/6J (56 days, male) 6.6
Pallidum
Expression energy: 5.6
69874066 Antisense, RP_050512_02_F01, Mouse strain C57BL/6J (56 days, male) 5.6

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