PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:86.5 nTPM
FANTOM5:38.6 Scaled Tags Per Million
Pig:97.0 nTPM
Mouse:37.4 nTPM
Allen mouse:4.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 86.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 71.4
2301 Female, age 85, both hemispheres 73.7
2090 Male, age 80, both hemispheres 72.4
1984 Male, age 76, both hemispheres 71.3
2188 Female, age 91, both hemispheres 68.1
Area postrema
nTPM: 86.5
2799 Male, age 61, both hemispheres 117.9
2306 Male, age 80, both hemispheres 78.9
2054 Male, age 76, both hemispheres 62.8
Dorsal cochlear nucleus
nTPM: 62.9
2370 Male, age 61, both hemispheres 66.9
2187 Female, age 91, both hemispheres 64.9
2058 Male, age 76, both hemispheres 63.6
2378 Male, age 80, both hemispheres 60.1
2802 Male, age 74, right hemisphere 59.1
Dorsal medullary reticular nucleus
nTPM: 55.0
2088 Male, age 76, both hemispheres 57.8
2373 Male, age 61, both hemispheres 56.8
2040 Female, age 85, both hemispheres 50.4
Dorsal motor vagal complex
nTPM: 57.1
2797 Male, age 61, both hemispheres 85.7
2185 Male, age 76, both hemispheres 69.6
2000 Male, age 74, unknown 59.3
2643 Male, age 74, both hemispheres 58.5
2133 Female, age 91, both hemispheres 52.0
2813 Female, age 72, unknown 51.2
2844 Male, age 55, unknown 44.7
2807 Female, age 85, both hemispheres 35.9
Dorsal tegmental nucleus
nTPM: 68.0
1936 Male, age 76, left hemisphere 82.1
2083 Male, age 80, both hemispheres 71.0
2358 Male, age 61, both hemispheres 63.7
2326 Male, age 74, both hemispheres 55.1
Dorsolateral tegmental area
nTPM: 66.1
2654 Male, age 80, both hemispheres 71.5
2751 Female, age 85, both hemispheres 71.0
2337 Male, age 61, both hemispheres 68.5
2141 Male, age 76, both hemispheres 63.5
2360 Male, age 74, both hemispheres 56.0
Gigantocellular reticular nuclei, medullary
nTPM: 58.2
2314 Male, age 61, both hemispheres 78.9
2310 Male, age 80, both hemispheres 58.0
1876 Female, age 85, both hemispheres 57.8
2387 Female, age 91, both hemispheres 52.5
2462 Male, age 74, both hemispheres 51.8
2022 Male, age 76, right hemisphere 50.5
Gigantocellular reticular nuclei, pars
nTPM: 59.5
2084 Female, age 85, both hemispheres 61.3
2330 Male, age 80, both hemispheres 61.3
2336 Male, age 61, both hemispheres 61.0
2706 Male, age 80, both hemispheres 58.6
2168 Male, age 76, both hemispheres 55.0
Inferior olive
nTPM: 73.5
2178 Male, age 61, both hemispheres 80.9
2563 Male, age 74, both hemispheres 78.9
2085 Female, age 85, both hemispheres 75.4
2628 Female, age 91, both hemispheres 66.7
2379 Male, age 80, both hemispheres 65.6
Kolliker-Fuse nucleus
nTPM: 76.7
2315 Male, age 76, right hemisphere 97.0
2163 Male, age 80, both hemispheres 67.0
2793 Female, age 91, left hemisphere 66.1
Lateral lemniscal nuclei
nTPM: 56.0
2746 Female, age 85, left hemisphere 70.7
2169 Male, age 76, both hemispheres 61.1
2320 Female, age 91, left hemisphere 58.7
2453 Male, age 74, right hemisphere 48.4
2036 Male, age 80, both hemispheres 41.3
Lateral medullary reticular nucleus
nTPM: 66.1
2852 Male, age 80, both hemispheres 80.2
2804 Female, age 91, both hemispheres 68.5
2374 Male, age 61, both hemispheres 66.6
2305 Male, age 74, both hemispheres 65.5
2190 Female, age 85, both hemispheres 59.2
2044 Male, age 76, both hemispheres 56.6
Lateral parabrachial nucleus
nTPM: 65.8
2792 Male, age 76, both hemispheres 79.1
2139 Female, age 85, right hemisphere 70.7
2013 Male, age 80, both hemispheres 68.7
2790 Male, age 61, both hemispheres 45.0
Lateral vestibular nucleus
nTPM: 75.7
2184 Male, age 76, both hemispheres 76.7
2311 Male, age 80, both hemispheres 74.7
Locus coeruleus
nTPM: 59.4
1980 Male, age 76, both hemispheres 85.7
2123 Female, age 91, both hemispheres 69.2
2317 Female, age 72, unknown 62.8
2162 Male, age 80, both hemispheres 50.6
2720 Male, age 74, both hemispheres 50.2
2014 Male, age 55, unknown 49.0
2788 Male, age 74, unknown 48.4
Medial olivary nucleus
nTPM: 70.2
2138 Female, age 91, both hemispheres 77.0
2851 Male, age 80, both hemispheres 75.1
1943 Male, age 61, both hemispheres 71.7
1962 Male, age 76, both hemispheres 56.8
Medial parabrachial nucleus
nTPM: 71.3
2463 Female, age 85, right hemisphere 84.6
2170 Female, age 91, both hemispheres 83.1
2786 Male, age 76, both hemispheres 75.0
2854 Male, age 80, both hemispheres 59.2
2156 Male, age 61, both hemispheres 54.6
Medial periolivary nuclei
nTPM: 57.0
2081 Male, age 80, both hemispheres 65.3
2791 Male, age 74, right hemisphere 57.5
2063 Male, age 76, both hemispheres 54.9
2458 Female, age 91, both hemispheres 54.1
2171 Female, age 85, both hemispheres 53.2
Medial vestibular nucleus
nTPM: 60.1
2624 Male, age 61, both hemispheres 67.0
2743 Female, age 85, both hemispheres 63.0
2801 Male, age 74, both hemispheres 61.7
2803 Female, age 91, both hemispheres 56.9
2134 Male, age 76, both hemispheres 56.2
2093 Male, age 80, both hemispheres 55.6
Motor facial nucleus
nTPM: 58.7
2062 Male, age 76, both hemispheres 65.7
2126 Male, age 61, both hemispheres 62.6
2795 Female, age 91, both hemispheres 59.6
2697 Female, age 85, both hemispheres 58.9
2365 Male, age 74, right hemisphere 53.7
2327 Male, age 80, both hemispheres 51.9
Motor hypoglossal nucleus
nTPM: 53.7
2125 Female, age 91, both hemispheres 65.7
2277 Male, age 76, both hemispheres 61.8
2182 Male, age 80, both hemispheres 59.3
2132 Female, age 85, both hemispheres 41.4
2461 Male, age 61, both hemispheres 39.9
Motor trigeminal nucleus
nTPM: 61.6
2309 Male, age 76, both hemispheres 76.0
2079 Male, age 80, both hemispheres 64.5
2335 Male, age 61, both hemispheres 60.6
2321 Female, age 91, both hemispheres 53.5
2560 Male, age 74, both hemispheres 53.0
Nuclei of the trapezoid body
nTPM: 57.9
2166 Male, age 80, both hemispheres 62.1
1983 Male, age 76, both hemispheres 61.9
2735 Female, age 85, both hemispheres 56.7
2159 Male, age 61, both hemispheres 55.2
2368 Female, age 91, both hemispheres 53.5
Nucleus ambiguus
nTPM: 72.5
2071 Male, age 76, both hemispheres 81.4
2096 Female, age 85, both hemispheres 63.6
Nucleus cuneatus
nTPM: 61.0
2380 Male, age 80, both hemispheres 67.9
2564 Male, age 74, both hemispheres 64.5
2100 Male, age 76, both hemispheres 63.1
2562 Male, age 61, both hemispheres 62.7
2376 Male, age 61, both hemispheres 62.2
2808 Female, age 85, both hemispheres 60.8
2805 Female, age 91, both hemispheres 60.6
2131 Male, age 76, both hemispheres 57.5
2381 Male, age 80, both hemispheres 49.7
Nucleus gracilis
nTPM: 59.9
2627 Male, age 74, both hemispheres 71.4
2382 Male, age 80, both hemispheres 58.7
2299 Female, age 85, both hemispheres 49.6
Nucleus raphe magnus
nTPM: 53.4
2328 Male, age 80, both hemispheres 58.4
2051 Male, age 76, both hemispheres 57.1
2160 Male, age 61, both hemispheres 53.6
2455 Male, age 74, both hemispheres 53.4
2459 Female, age 91, both hemispheres 49.9
2172 Female, age 85, both hemispheres 48.1
Nucleus raphe obscurus
nTPM: 68.8
2142 Male, age 76, midline 77.7
2845 Female, age 85, midline 69.1
2800 Male, age 61, midline 59.7
Nucleus raphe pallidus
nTPM: 70.8
1924 Male, age 61, midline 87.3
2183 Male, age 80, midline 64.5
2145 Male, age 76, midline 60.5
Nucleus tractus solitarii
nTPM: 44.7
2656 Male, age 76, both hemispheres 56.8
2307 Male, age 80, both hemispheres 43.9
2191 Female, age 85, both hemispheres 39.1
2144 Female, age 91, right hemisphere 38.9
Paramedian reticular nucleus
nTPM: 54.2
2057 Male, age 80, both hemispheres 62.0
2050 Female, age 85, both hemispheres 53.2
2313 Male, age 61, both hemispheres 51.4
2052 Male, age 76, both hemispheres 50.1
Parvicellular reticular nuclei
nTPM: 62.1
2119 Male, age 80, both hemispheres 73.8
2095 Male, age 76, both hemispheres 66.0
2558 Male, age 74, both hemispheres 46.6
Parvicellular reticular nuclei, medullary
nTPM: 57.8
2189 Female, age 91, both hemispheres 67.7
2181 Male, age 80, left hemisphere 53.7
2091 Female, age 85, both hemispheres 52.0
Pedunculopontine tegmental nucleus
nTPM: 60.2
2334 Male, age 80, both hemispheres 69.4
1921 Female, age 85, both hemispheres 63.2
2338 Male, age 61, both hemispheres 48.0
Peritrigeminal nucleus
nTPM: 65.9
2067 Female, age 85, both hemispheres 77.6
2136 Male, age 76, both hemispheres 61.7
2179 Male, age 61, both hemispheres 58.4
Pontine nuclei
nTPM: 62.6
1863 Male, age 55, unknown 73.2
2787 Female, age 85, both hemispheres 67.6
2115 Male, age 80, left hemisphere 67.5
2319 Female, age 91, both hemispheres 65.5
2109 Female, age 72, unknown 63.6
1968 Male, age 76, left hemisphere 61.0
2454 Male, age 74, left hemisphere 52.3
2727 Male, age 61, right hemisphere 50.4
Pontine raphe nucleus
nTPM: 68.0
2853 Male, age 76, midline 73.9
2122 Female, age 85, midline 62.0
Posteroventral cochlear nucleus
nTPM: 66.1
2135 Female, age 91, both hemispheres 74.7
2371 Male, age 61, both hemispheres 71.5
2341 Male, age 80, both hemispheres 70.8
2752 Female, age 85, both hemispheres 56.7
2070 Male, age 76, both hemispheres 56.5
Prepositus hypoglossal nucleus
nTPM: 62.1
2086 Male, age 80, both hemispheres 67.8
2855 Female, age 85, right hemisphere 56.5
Principal sensory trigeminal nucleus
nTPM: 62.4
2324 Male, age 76, both hemispheres 82.9
2158 Male, age 61, both hemispheres 58.5
2367 Female, age 91, left hemisphere 56.1
2008 Male, age 80, left hemisphere 52.1
Reticular pontine nucleus, caudal
nTPM: 60.4
2457 Female, age 91, both hemispheres 65.8
2092 Male, age 76, both hemispheres 65.3
2332 Male, age 80, right hemisphere 55.4
2559 Male, age 74, both hemispheres 54.9
Reticular pontine nucleus, oral
nTPM: 63.1
2167 Male, age 76, both hemispheres 75.8
1939 Male, age 80, both hemispheres 68.1
2012 Female, age 85, both hemispheres 59.7
2366 Female, age 91, both hemispheres 59.4
2361 Male, age 74, both hemispheres 52.7
Reticulotegmental nucleus
nTPM: 63.0
2333 Male, age 80, both hemispheres 66.9
2322 Female, age 91, both hemispheres 65.5
2325 Male, age 76, both hemispheres 64.5
2452 Male, age 74, both hemispheres 55.2
Spinal trigeminal nucleus, caudal
nTPM: 59.7
2447 Male, age 76, both hemispheres 67.8
2308 Male, age 80, both hemispheres 64.6
2312 Male, age 61, both hemispheres 59.4
2642 Male, age 74, both hemispheres 57.5
2390 Female, age 91, both hemispheres 49.2
Spinal trigeminal nucleus, interpolar
nTPM: 54.1
2625 Male, age 61, both hemispheres 60.4
2033 Male, age 80, both hemispheres 57.7
2389 Female, age 91, both hemispheres 55.5
2066 Male, age 76, right hemisphere 53.7
2386 Female, age 85, both hemispheres 43.1
Spinal trigeminal nucleus, oral
nTPM: 60.9
1978 Male, age 76, both hemispheres 62.3
2164 Male, age 80, both hemispheres 61.6
2737 Female, age 85, both hemispheres 58.7
Spinal vestibular nucleus
nTPM: 58.3
2748 Male, age 76, both hemispheres 63.5
2780 Male, age 80, both hemispheres 60.2
2796 Male, age 61, both hemispheres 59.5
2186 Female, age 91, both hemispheres 58.4
2806 Female, age 85, both hemispheres 54.8
2384 Male, age 74, both hemispheres 53.4
Subcoeruleus area
nTPM: 63.0
2369 Female, age 85, left hemisphere 73.0
2323 Female, age 91, left hemisphere 68.4
2089 Male, age 76, left hemisphere 62.4
1958 Male, age 80, both hemispheres 60.2
2451 Male, age 74, both hemispheres 51.1
Superior olive
nTPM: 56.9
2364 Male, age 74, right hemisphere 61.2
2020 Male, age 76, both hemispheres 57.9
2329 Male, age 80, right hemisphere 57.9
1875 Female, age 85, both hemispheres 55.1
2561 Female, age 91, both hemispheres 52.5
Superior vestibular nucleus
nTPM: 76.0
2061 Male, age 76, both hemispheres 91.4
2015 Male, age 80, both hemispheres 71.3
2383 Male, age 74, both hemispheres 65.4
Ventral medullary reticular nucleus
nTPM: 62.0
2372 Male, age 61, both hemispheres 62.8
2060 Male, age 76, both hemispheres 61.2
Ventral periolivary nuclei
nTPM: 54.3
2165 Male, age 80, both hemispheres 63.2
2130 Female, age 85, both hemispheres 59.1
2023 Male, age 76, both hemispheres 49.0
2794 Female, age 91, left hemisphere 45.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 60.9
2302 Female, age 91, both hemispheres 66.1
2118 Male, age 80, both hemispheres 65.0
2180 Male, age 61, both hemispheres 62.5
1986 Male, age 76, both hemispheres 56.3
2741 Female, age 85, both hemispheres 54.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 65.6
2359 Male, age 61, both hemispheres 103.4
1959 Male, age 76, both hemispheres 60.8
2161 Male, age 80, both hemispheres 59.9
2456 Female, age 91, both hemispheres 57.8
2840 Female, age 85, both hemispheres 57.6
2449 Male, age 74, both hemispheres 54.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 38.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 28.9
FF:10165-103B3 76 years, female 33.3
FF:10182-103D2 60 years, female 24.5
Medulla oblongata
Scaled Tags Per Million: 38.6
FF:10174-103C3 60 years, female 49.5
FF:10155-103A2 76 years, female 37.0
FF:10038-101F2 18-64 years, mixed 29.2
Pons
Scaled Tags Per Million: 22.9
FF:10033-101E6 18-54 years, mixed 22.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 97.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 97.0
Samples: 4

Max nTPM: 126.6
Min nTPM: 60.1
Sample A Female 100.1
Sample B Female 60.1
Sample C Male 101.1
Sample D Male 126.6
Pons
nTPM: 58.4
Samples: 4

Max nTPM: 99.2
Min nTPM: 32.6
Sample A Female 48.4
Sample B Female 32.6
Sample C Male 53.3
Sample D Male 99.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 37.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 37.4
Samples: 4

Max nTPM: 39.4
Min nTPM: 36.1
Sample A Male 39.4
Sample B Male 36.2
Sample C Female 37.8
Sample D Female 36.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.4
69874066 Antisense, RP_050512_02_F01, Mouse strain C57BL/6J (56 days, male) 3.4
Pons
Expression energy: 4.1
69874066 Antisense, RP_050512_02_F01, Mouse strain C57BL/6J (56 days, male) 4.1

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