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VTN
HPA
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  • VTN
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

VTN
Synonyms VN
Gene descriptioni

Full gene name according to HGNC.

Vitronectin
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Candidate cardiovascular disease genes
Plasma proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q11.2
Chromosome location (bp) 28367284 - 28373091
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000109072 (version 109)
Entrez gene 7448
HGNC HGNC:12724
UniProt P04004 (UniProt - Evidence at protein level)
neXtProt NX_P04004
GeneCards VTN
Antibodypedia VTN antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Vitronectin is a cell adhesion and spreading factor found in serum and tissues. Vitronectin interact with glycosaminoglycans and proteoglycans. Is recognized by certain members of the integrin family and serves as a cell-to-substrate adhesion molecule. Inhibitor of the membrane-damaging effect of the terminal cytolytic complement pathway.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Heparin-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell adhesion
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene functions in part as an adhesive glycoprotein. Differential expression of this protein can promote either cell adhesion or migration as it links cells to the extracellular matrix through a variety of ligands. These ligands include integrins, plasminogen activator inhibitor-1, and urokinase plasminogen activator receptor. This secreted protein can be present in the plasma as a monomer or dimer and forms a multimer in the extracellular matrix of several tissues. This protein also inhibits the membrane-damaging effect of the terminal cytolytic complement pathway and binds to several serpin serine protease inhibitors. This protein can also promote extracellular matrix degradation and thus plays a role in tumorigenesis. It is involved in a variety of other biological processes such as the regulation of the coagulation pathway, wound healing, and tissue remodeling. The heparin-binding domain of this protein give it anti-microbial properties. It is also a lipid binding protein that forms a principal component of high density lipoprotein. [provided by RefSeq, Aug 2020]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
VTN-201
ENSP00000226218
ENST00000226218
P04004
[Direct mapping] Vitronectin Vitronectin V65 subunit Vitronectin V10 subunit Somatomedin-B
Show all
D9ZGG2
[Target identity:100%; Query identity:100%] Vitronectin
Show all
Transporters
   Accessory Factors Involved in Transport
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Candidate cardiovascular disease genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0005044 [scavenger receptor activity]
GO:0005178 [integrin binding]
GO:0005201 [extracellular matrix structural constituent]
GO:0005515 [protein binding]
GO:0005518 [collagen binding]
GO:0005576 [extracellular region]
GO:0005604 [basement membrane]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005796 [Golgi lumen]
GO:0006897 [endocytosis]
GO:0006955 [immune response]
GO:0007155 [cell adhesion]
GO:0007160 [cell-matrix adhesion]
GO:0008201 [heparin binding]
GO:0010811 [positive regulation of cell-substrate adhesion]
GO:0010951 [negative regulation of endopeptidase activity]
GO:0014911 [positive regulation of smooth muscle cell migration]
GO:0016477 [cell migration]
GO:0030155 [regulation of cell adhesion]
GO:0030195 [negative regulation of blood coagulation]
GO:0030198 [extracellular matrix organization]
GO:0030247 [polysaccharide binding]
GO:0030949 [positive regulation of vascular endothelial growth factor receptor signaling pathway]
GO:0031012 [extracellular matrix]
GO:0032092 [positive regulation of protein binding]
GO:0033627 [cell adhesion mediated by integrin]
GO:0035987 [endodermal cell differentiation]
GO:0042802 [identical protein binding]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0048237 [rough endoplasmic reticulum lumen]
GO:0048260 [positive regulation of receptor-mediated endocytosis]
GO:0048709 [oligodendrocyte differentiation]
GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation]
GO:0050840 [extracellular matrix binding]
GO:0051258 [protein polymerization]
GO:0051918 [negative regulation of fibrinolysis]
GO:0061302 [smooth muscle cell-matrix adhesion]
GO:0062023 [collagen-containing extracellular matrix]
GO:0070062 [extracellular exosome]
GO:0071062 [alphav-beta3 integrin-vitronectin complex]
GO:0072562 [blood microparticle]
GO:0090303 [positive regulation of wound healing]
GO:0097421 [liver regeneration]
GO:0098637 [protein complex involved in cell-matrix adhesion]
GO:0110165 [cellular anatomical entity]
GO:1904090 [peptidase inhibitor complex]
Show all
478 aa
54.3 kDa
Yes 0
VTN-203
ENSP00000440439
ENST00000542029
F5GX75
[Direct mapping] Vitronectin
Show all
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Show all
GO:0005044 [scavenger receptor activity]
GO:0005783 [endoplasmic reticulum]
GO:0006897 [endocytosis]
GO:0006955 [immune response]
GO:0030247 [polysaccharide binding]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0110165 [cellular anatomical entity]
Show all
118 aa
13 kDa
Yes 0

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