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INPP4B
HPA
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  • SUMMARY

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  • INPP4B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

INPP4B
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Inositol polyphosphate-4-phosphatase type II B
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband q31.21
Chromosome location (bp) 142023160 - 142847432
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

14
Ensembl ENSG00000109452 (version 109)
Entrez gene 8821
HGNC HGNC:6075
UniProt O15327 (UniProt - Evidence at protein level)
neXtProt NX_O15327
GeneCards INPP4B
Antibodypedia INPP4B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalyzes the hydrolysis of the 4-position phosphate of phosphatidylinositol 3,4-bisphosphate, inositol 1,3,4-trisphosphate and inositol 3,4-trisphosphate 1, 2. Plays a role in the late stages of macropinocytosis by dephosphorylating phosphatidylinositol 3,4-bisphosphate in membrane ruffles 3. The lipid phosphatase activity is critical for tumor suppressor function. Antagonizes the PI3K-AKT/PKB signaling pathway by dephosphorylating phosphoinositides and thereby modulating cell cycle progression and cell survival 4, 5.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid metabolism
Gene summary (Entrez)i

Useful information about the gene from Entrez

INPP4B encodes the inositol polyphosphate 4-phosphatase type II, one of the enzymes involved in phosphatidylinositol signaling pathways. This enzyme removes the phosphate group at position 4 of the inositol ring from inositol 3,4-bisphosphate. There is limited data to suggest that the human type II enzyme is subject to alternative splicing, as has been established for the type I enzyme. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
INPP4B-201
ENSP00000262992
ENST00000262992
O15327
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006629 [lipid metabolic process]
GO:0006661 [phosphatidylinositol biosynthetic process]
GO:0007165 [signal transduction]
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
GO:0016787 [hydrolase activity]
GO:0017161 [inositol-1,3,4-trisphosphate 4-phosphatase activity]
GO:0036092 [phosphatidylinositol-3-phosphate biosynthetic process]
GO:0043647 [inositol phosphate metabolic process]
GO:0046855 [inositol phosphate dephosphorylation]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052828 [inositol-3,4-bisphosphate 4-phosphatase activity]
Show all
924 aa
104.7 kDa
No 0
INPP4B-202
ENSP00000422052
ENST00000503927
D6R9J5
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
39 aa
4.3 kDa
No 0
INPP4B-206
ENSP00000424057
ENST00000506217
O15327
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006629 [lipid metabolic process]
GO:0006661 [phosphatidylinositol biosynthetic process]
GO:0007165 [signal transduction]
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
GO:0016787 [hydrolase activity]
GO:0017161 [inositol-1,3,4-trisphosphate 4-phosphatase activity]
GO:0036092 [phosphatidylinositol-3-phosphate biosynthetic process]
GO:0043647 [inositol phosphate metabolic process]
GO:0052828 [inositol-3,4-bisphosphate 4-phosphatase activity]
Show all
131 aa
14.7 kDa
No 0
INPP4B-210
ENSP00000426957
ENST00000506788
D6RE59
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
Show all
84 aa
9.4 kDa
No 0
INPP4B-212
ENSP00000426897
ENST00000507861
Q9BS68
[Direct mapping] INPP4B protein; Inositol polyphosphate 4-phosphatase type II
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
Show all
53 aa
6 kDa
No 0
INPP4B-214
ENSP00000423954
ENST00000508116
O15327
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006629 [lipid metabolic process]
GO:0006661 [phosphatidylinositol biosynthetic process]
GO:0007165 [signal transduction]
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
GO:0016787 [hydrolase activity]
GO:0017161 [inositol-1,3,4-trisphosphate 4-phosphatase activity]
GO:0036092 [phosphatidylinositol-3-phosphate biosynthetic process]
GO:0043647 [inositol phosphate metabolic process]
GO:0052828 [inositol-3,4-bisphosphate 4-phosphatase activity]
Show all
924 aa
104.7 kDa
No 0
INPP4B-215
ENSP00000422793
ENST00000509777
E7EQN9
[Direct mapping] Phosphatidylinositol-3,4-bisphosphate 4-phosphatase
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016020 [membrane]
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
GO:0036092 [phosphatidylinositol-3-phosphate biosynthetic process]
Show all
938 aa
106 kDa
No 2
INPP4B-216
ENSP00000427250
ENST00000510812
D6RJC3
[Direct mapping] Phosphatidylinositol-3,4-bisphosphate 4-phosphatase
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
GO:0036092 [phosphatidylinositol-3-phosphate biosynthetic process]
Show all
817 aa
92.1 kDa
No 0
INPP4B-217
ENSP00000426207
ENST00000511838
E9PCZ3
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
GO:0036092 [phosphatidylinositol-3-phosphate biosynthetic process]
Show all
753 aa
85.4 kDa
No 2
INPP4B-220
ENSP00000425487
ENST00000513000
O15327
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006629 [lipid metabolic process]
GO:0006661 [phosphatidylinositol biosynthetic process]
GO:0007165 [signal transduction]
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
GO:0016787 [hydrolase activity]
GO:0017161 [inositol-1,3,4-trisphosphate 4-phosphatase activity]
GO:0036092 [phosphatidylinositol-3-phosphate biosynthetic process]
GO:0043647 [inositol phosphate metabolic process]
GO:0052828 [inositol-3,4-bisphosphate 4-phosphatase activity]
Show all
924 aa
104.7 kDa
No 0
INPP4B-221
ENSP00000421065
ENST00000514525
E9PHC0
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
GO:0036092 [phosphatidylinositol-3-phosphate biosynthetic process]
Show all
686 aa
77.5 kDa
No 0
INPP4B-223
ENSP00000486368
ENST00000630044
A0A0D9SF83
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
Show all
45 aa
5 kDa
No 0
INPP4B-224
ENSP00000510027
ENST00000690114
A0A8I5KVN1
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
23 aa
2.5 kDa
No 0
INPP4B-225
ENSP00000508922
ENST00000692370
A0A8I5KPN5
[Direct mapping] Inositol polyphosphate 4-phosphatase type II
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016316 [phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity]
GO:0036092 [phosphatidylinositol-3-phosphate biosynthetic process]
Show all
115 aa
13 kDa
No 0

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