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  • GAB1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:11.7 nTPM
HPA Brain:194.4 nTPM
GTEx:11.7 nTPM
FANTOM5:148.4 Scaled Tags Per Million
Pig:42.5 nTPM
Mouse:21.0 nTPM
Allen mouse:1.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB034333
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 79.8
2288 Male, age 75, left hemisphere 121.8
2481 Female, age 94, left hemisphere 89.7
2846 Female, age 79, unknown 84.3
2289 Male, age 61, right hemisphere 76.6
1854 Male, age 80, left hemisphere 76.3
1781 Male, age 74, unknown 69.7
2290 Female, age 72, unknown 67.5
1857 Female, age 85, left hemisphere 52.7
Globus pallidus, externus
nTPM: 165.7
2646 Male, age 61, right hemisphere 181.1
1996 Male, age 80, right hemisphere 179.7
2567 Female, age 72, unknown 176.9
2772 Female, age 79, unknown 148.9
2395 Male, age 75, both hemispheres 141.7
Globus pallidus, internus
nTPM: 194.4
2111 Female, age 85, right hemisphere 253.6
2778 Female, age 91, both hemispheres 207.8
2037 Male, age 80, right hemisphere 192.4
1818 Male, age 74, unknown 192.2
2566 Female, age 72, unknown 186.5
2287 Male, age 75, right hemisphere 185.8
2483 Female, age 94, right hemisphere 142.9
Nucleus accumbens
nTPM: 97.1
2391 Female, age 94, left hemisphere 163.2
2698 Female, age 72, unknown 139.4
2286 Male, age 75, left hemisphere 109.0
2732 Male, age 80, right hemisphere 100.2
1783 Male, age 74, unknown 74.6
1806 Female, age 85, left hemisphere 72.6
2824 Male, age 61, right hemisphere 68.5
1856 Female, age 91, right hemisphere 49.3
Nucleus basalis of Meynert
nTPM: 113.9
2569 Male, age 61, both hemispheres 160.4
2821 Male, age 75, both hemispheres 117.1
2484 Female, age 94, left hemisphere 89.7
2393 Male, age 80, right hemisphere 88.5
Nucleus of the diagonal band
nTPM: 50.7
1812 Female, age 91, both hemispheres 60.0
2029 Male, age 61, right hemisphere 57.8
1979 Male, age 74, unknown 57.7
2195 Female, age 85, both hemispheres 40.7
2775 Male, age 80, right hemisphere 37.1
Putamen
nTPM: 92.0
2647 Male, age 75, left hemisphere 121.9
1829 Male, age 74, unknown 115.7
2482 Female, age 94, left hemisphere 111.2
2489 Female, age 72, unknown 96.8
1937 Female, age 91, right hemisphere 85.2
2466 Female, age 79, unknown 65.5
1838 Male, age 80, right hemisphere 47.9
Septal nuclei
nTPM: 68.4
2394 Male, age 61, left hemisphere 109.4
2199 Male, age 80, right hemisphere 96.0
2629 Female, age 94, right hemisphere 75.4
2009 Female, age 91, both hemispheres 58.9
2059 Female, age 85, both hemispheres 56.5
2031 Female, age 72, unknown 51.1
1960 Male, age 74, unknown 31.9
Stria terminalis, bed nucleus
nTPM: 62.7
2201 Male, age 74, unknown 72.9
1974 Female, age 91, both hemispheres 65.5
2486 Female, age 94, both hemispheres 49.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 10.8
Samples: 246

Max nTPM: 27.5
Min nTPM: 3.2
Std nTPM: 4.0
Median nTPM: 10.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 27.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 25.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 23.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 23.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 22.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 20.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 19.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 17.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 17.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 17.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 17.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 17.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 17.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 17.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 17.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 17.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 17.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 16.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 16.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 16.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 16.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 16.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 16.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 15.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 15.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 15.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 15.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 15.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 15.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 15.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 15.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 15.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 15.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 15.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 15.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 14.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 14.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 14.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 14.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 14.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 14.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 14.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 14.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 14.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 14.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 14.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 14.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 14.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 13.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 13.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 13.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 13.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 13.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 13.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 13.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 13.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 13.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 13.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 13.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 13.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 13.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 13.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 13.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 13.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 13.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 13.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 13.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 13.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 13.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 12.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 12.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 12.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 12.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 12.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 12.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 12.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 12.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 12.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 12.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 12.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 12.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 12.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 12.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 12.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 12.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 12.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 12.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 12.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 12.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 12.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 11.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 11.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 11.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 11.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 11.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 11.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 11.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 11.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 11.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 11.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 11.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 11.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 11.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 11.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 11.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 11.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 11.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 11.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 11.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 11.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 10.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 10.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 10.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 10.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 10.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 10.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 10.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 10.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 10.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 10.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 10.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 10.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 10.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 10.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 10.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 10.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 10.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 10.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 10.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 10.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 10.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 10.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 10.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 10.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 10.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 10.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 9.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 9.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 9.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 9.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 9.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 9.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 9.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 9.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 9.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 9.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 9.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 9.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 9.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 9.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 9.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 9.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 9.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 9.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 9.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 9.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 9.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 9.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 9.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 8.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 8.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 8.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 8.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 8.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 8.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 8.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 8.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 8.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 8.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 8.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 8.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 8.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 8.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 8.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 8.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 8.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 8.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 8.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 7.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 7.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 7.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 7.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 7.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 7.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 7.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 7.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 7.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 7.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 7.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 7.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 7.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 7.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 7.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 7.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 7.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 7.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 6.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 6.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 6.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 6.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 6.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 6.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 6.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 6.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 6.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 6.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 6.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 6.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 6.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 6.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 6.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 6.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 6.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 6.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 6.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 6.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 6.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 6.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 6.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 6.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 6.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 5.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 5.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 5.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 5.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 5.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 5.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 5.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 5.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 5.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 5.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 5.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 5.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 5.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 5.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 5.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 4.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 4.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 4.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 4.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 4.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 4.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 4.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 3.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 3.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 7.7
Samples: 246

Max nTPM: 36.9
Min nTPM: 2.2
Std nTPM: 4.1
Median nTPM: 6.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 36.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 27.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 23.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 20.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 19.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 18.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 17.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 16.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 16.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 16.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 15.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 15.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 14.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 14.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 14.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 13.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 13.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 13.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 13.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 13.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 13.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 12.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 12.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 12.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 12.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 12.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 12.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 11.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 11.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 11.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 11.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 11.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 11.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 11.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 10.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 10.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 10.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 10.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 10.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 10.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 10.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 10.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 10.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 10.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 10.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 10.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 10.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 10.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 10.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 10.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 9.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 9.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 9.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 9.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 9.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 9.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 9.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 9.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 9.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 9.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 9.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 9.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 9.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 9.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 9.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 9.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 9.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 9.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 8.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 8.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 8.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 8.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 8.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 8.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 8.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 8.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 8.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 8.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 8.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 8.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 8.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 8.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 8.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 8.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 8.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 8.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 8.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 8.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 8.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 7.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 7.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 7.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 7.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 7.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 7.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 7.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 7.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 7.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 7.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 7.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 7.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 7.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 7.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 7.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 7.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 7.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 7.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 7.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 7.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 7.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 7.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 7.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 7.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 7.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 7.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 7.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 7.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 7.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 7.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 6.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 6.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 6.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 6.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 6.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 6.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 6.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 6.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 6.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 6.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 6.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 6.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 6.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 6.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 6.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 6.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 6.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 6.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 6.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 6.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 6.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 6.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 6.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 6.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 6.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 6.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 6.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 6.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 6.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 6.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 6.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 6.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 6.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 5.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 5.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 5.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 5.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 5.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 5.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 5.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 5.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 5.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 5.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 5.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 5.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 5.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 5.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 5.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 5.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 5.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 5.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 5.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 5.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 5.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 5.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 5.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 5.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 5.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 5.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 5.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 5.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 5.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 5.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 5.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 5.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 5.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 5.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 5.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 5.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 5.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 5.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 4.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 4.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 4.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 4.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 4.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 4.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 4.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 4.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 4.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 4.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 4.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 4.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 4.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 4.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 4.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 4.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 4.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 4.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 4.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 4.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 4.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 4.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 4.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 4.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 4.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 4.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 4.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 4.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 4.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 3.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 3.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 3.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 3.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 3.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 3.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 3.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 3.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 3.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 3.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 3.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 3.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 3.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 3.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 3.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 3.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 3.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 3.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 3.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 3.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 3.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 2.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 2.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 2.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 2.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 2.2
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Brain - Putamen (basal ganglia)
Average nTPM: 11.7
Samples: 205

Max nTPM: 31.3
Min nTPM: 4.0
Std nTPM: 4.2
Median nTPM: 11.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 31.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 25.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 25.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 23.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 21.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 21.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 20.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 20.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 18.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 18.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 18.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 18.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 18.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 18.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 17.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 17.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 17.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 17.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 17.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 17.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 16.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 16.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 16.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 16.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 16.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 16.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 16.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 16.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 15.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 15.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 15.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 15.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 15.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 15.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 15.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 15.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 15.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 15.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 14.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 14.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 14.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 14.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 14.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 14.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 14.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 14.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 14.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 14.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 14.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 14.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 14.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 14.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 14.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 13.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 13.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 13.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 13.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 13.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 13.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 13.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 13.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 13.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 13.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 13.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 13.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 13.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 13.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 13.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 12.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 12.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 12.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 12.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 12.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 12.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 12.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 12.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 12.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 12.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 12.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 12.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 12.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 12.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 11.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 11.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 11.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 11.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 11.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 11.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 11.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 11.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 11.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 11.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 11.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 11.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 11.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 11.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 11.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 11.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 11.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 11.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 11.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 11.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 11.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 11.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 11.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 11.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 11.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 11.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 11.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 11.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 10.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 10.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 10.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 10.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 10.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 10.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 10.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 10.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 10.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 10.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 10.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 10.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 10.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 10.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 10.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 10.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 10.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 10.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 9.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 9.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 9.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 9.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 9.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 9.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 9.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 9.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 9.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 9.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 9.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 9.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 9.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 9.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 9.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 9.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 9.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 9.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 9.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 8.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 8.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 8.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 8.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 8.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 8.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 8.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 8.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 8.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 8.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 8.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 8.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 8.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 7.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 7.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 7.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 7.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 7.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 7.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 7.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 7.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 7.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 7.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 7.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 7.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 7.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 7.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 6.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 6.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 6.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 6.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 6.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 6.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 6.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 6.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 6.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 6.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 6.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 5.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 5.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 5.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 5.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 5.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 5.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 5.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 5.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 4.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 4.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 4.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 4.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 4.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

148.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 61.0
FF:10164-103B2 76 years, female 61.0
Nucleus accumbens
Scaled Tags Per Million: 113.0
FF:10037-101F1 23-56 years, mixed 113.0
Putamen
Scaled Tags Per Million: 53.8
FF:10176-103C5 60 years, female 53.8
Globus pallidus
Scaled Tags Per Million: 148.4
FF:10161-103A8 76 years, female 189.3
FF:10175-103C4 60 years, female 107.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.5
Pig sample Sample description nTPM
Caudate
nTPM: 19.8
Samples: 4

Max nTPM: 21.7
Min nTPM: 17.1
Sample A Female 21.7
Sample B Female 17.1
Sample C Male 19.8
Sample D Male 20.6
Putamen
nTPM: 42.6
Samples: 4

Max nTPM: 66.9
Min nTPM: 25.3
Sample A Female 66.9
Sample B Female 25.3
Sample C Male 30.2
Sample D Male 47.8
Septum
nTPM: 31.4
Samples: 4

Max nTPM: 39.3
Min nTPM: 24.3
Sample A Female 30.9
Sample B Female 24.3
Sample C Male 31.1
Sample D Male 39.3
Ventral pallidum
nTPM: 42.3
Samples: 4

Max nTPM: 60.2
Min nTPM: 22.4
Sample A Female 22.4
Sample B Female 32.7
Sample C Male 53.9
Sample D Male 60.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 21.0
Samples: 4

Max nTPM: 22.2
Min nTPM: 20.2
Sample A Male 20.8
Sample B Male 20.7
Sample C Female 22.2
Sample D Female 20.2
Septum
nTPM: 19.4
Samples: 4

Max nTPM: 25.6
Min nTPM: 13.8
Sample A Male 13.8
Sample B Male 17.9
Sample C Female 20.3
Sample D Female 25.6
Ventral forebrain
nTPM: 13.3
Samples: 4

Max nTPM: 13.7
Min nTPM: 12.8
Sample A Male 12.8
Sample B Male 13.6
Sample C Female 12.9
Sample D Female 13.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.1
71735832 Antisense, RP_051010_03_C06, Mouse strain C57BL/6J (56 days, male) 1.1
Pallidum
Expression energy: 1.0
71735832 Antisense, RP_051010_03_C06, Mouse strain C57BL/6J (56 days, male) 1.0

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