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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:107.7 nTPM
HPA Brain:152.8 nTPM
GTEx:107.7 nTPM
FANTOM5:280.9 Scaled Tags Per Million
Pig:431.1 nTPM
Mouse:191.0 nTPM
Allen mouse:9.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029128
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 101.2
1854 Male, age 80, left hemisphere 134.8
1857 Female, age 85, left hemisphere 129.7
2290 Female, age 72, unknown 105.8
2289 Male, age 61, right hemisphere 100.8
2481 Female, age 94, left hemisphere 100.8
1781 Male, age 74, unknown 96.8
2288 Male, age 75, left hemisphere 81.6
2846 Female, age 79, unknown 59.3
Globus pallidus, externus
nTPM: 75.5
2646 Male, age 61, right hemisphere 105.1
1996 Male, age 80, right hemisphere 91.3
2772 Female, age 79, unknown 68.1
2567 Female, age 72, unknown 57.9
2395 Male, age 75, both hemispheres 55.2
Globus pallidus, internus
nTPM: 68.1
2483 Female, age 94, right hemisphere 106.4
2037 Male, age 80, right hemisphere 81.5
2287 Male, age 75, right hemisphere 68.0
1818 Male, age 74, unknown 67.7
2566 Female, age 72, unknown 56.9
2778 Female, age 91, both hemispheres 51.6
2111 Female, age 85, right hemisphere 44.2
Nucleus accumbens
nTPM: 152.8
1856 Female, age 91, right hemisphere 205.5
2824 Male, age 61, right hemisphere 193.3
1783 Male, age 74, unknown 191.5
1806 Female, age 85, left hemisphere 179.9
2698 Female, age 72, unknown 153.7
2732 Male, age 80, right hemisphere 149.2
2286 Male, age 75, left hemisphere 88.5
2391 Female, age 94, left hemisphere 61.0
Nucleus basalis of Meynert
nTPM: 94.6
2569 Male, age 61, both hemispheres 132.9
2484 Female, age 94, left hemisphere 93.1
2393 Male, age 80, right hemisphere 90.3
2821 Male, age 75, both hemispheres 62.2
Nucleus of the diagonal band
nTPM: 88.2
1979 Male, age 74, unknown 140.6
1812 Female, age 91, both hemispheres 100.6
2775 Male, age 80, right hemisphere 74.9
2195 Female, age 85, both hemispheres 68.4
2029 Male, age 61, right hemisphere 56.5
Putamen
nTPM: 85.8
1838 Male, age 80, right hemisphere 135.0
1937 Female, age 91, right hemisphere 120.4
2482 Female, age 94, left hemisphere 84.6
2647 Male, age 75, left hemisphere 71.0
1829 Male, age 74, unknown 70.7
2489 Female, age 72, unknown 65.3
2466 Female, age 79, unknown 53.9
Septal nuclei
nTPM: 74.2
2009 Female, age 91, both hemispheres 90.0
2059 Female, age 85, both hemispheres 88.8
2199 Male, age 80, right hemisphere 83.5
2394 Male, age 61, left hemisphere 72.5
2031 Female, age 72, unknown 64.9
2629 Female, age 94, right hemisphere 60.2
1960 Male, age 74, unknown 59.4
Stria terminalis, bed nucleus
nTPM: 64.7
2486 Female, age 94, both hemispheres 72.9
2201 Male, age 74, unknown 69.0
1974 Female, age 91, both hemispheres 52.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 58.1
Samples: 246

Max nTPM: 126.9
Min nTPM: 17.5
Std nTPM: 19.2
Median nTPM: 56.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 126.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 104.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 104.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 103.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 101.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 100.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 100.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 99.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 98.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 98.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 95.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 95.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 95.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 93.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 92.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 91.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 90.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 90.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 89.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 88.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 88.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 87.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 86.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 85.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 84.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 83.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 83.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 82.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 82.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 82.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 81.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 80.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 80.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 79.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 79.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 78.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 78.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 78.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 77.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 77.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 77.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 77.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 77.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 76.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 76.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 76.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 74.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 74.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 74.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 74.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 74.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 73.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 73.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 71.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 71.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 70.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 70.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 70.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 69.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 69.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 68.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 68.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 68.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 68.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 67.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 67.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 67.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 67.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 66.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 66.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 66.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 66.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 66.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 66.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 66.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 65.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 65.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 64.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 64.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 64.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 64.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 64.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 64.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 64.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 64.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 64.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 64.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 64.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 62.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 62.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 62.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 62.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 61.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 61.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 61.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 60.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 60.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 60.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 59.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 58.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 58.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 58.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 58.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 58.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 58.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 58.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 58.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 58.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 58.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 58.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 57.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 57.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 57.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 57.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 57.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 57.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 57.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 56.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 56.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 56.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 56.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 56.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 56.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 55.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 55.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 55.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 55.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 55.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 55.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 55.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 54.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 54.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 54.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 54.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 54.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 54.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 53.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 53.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 53.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 52.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 52.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 52.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 52.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 52.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 52.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 52.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 51.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 51.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 51.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 51.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 51.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 50.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 50.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 50.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 50.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 50.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 49.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 49.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 49.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 49.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 49.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 49.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 49.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 49.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 48.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 48.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 48.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 48.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 48.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 47.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 47.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 47.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 47.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 47.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 47.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 47.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 46.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 46.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 45.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 45.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 45.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 45.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 44.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 44.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 44.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 44.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 44.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 44.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 43.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 43.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 42.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 42.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 42.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 42.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 42.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 42.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 42.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 42.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 42.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 42.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 42.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 42.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 41.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 41.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 41.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 41.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 41.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 41.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 41.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 41.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 41.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 40.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 39.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 39.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 37.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 37.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 37.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 36.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 36.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 35.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 35.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 33.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 32.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 31.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 31.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 31.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 31.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 31.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 29.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 28.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 27.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 27.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 27.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 27.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 27.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 26.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 26.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 26.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 24.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 21.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 21.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 21.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 18.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 18.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 17.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 107.7
Samples: 246

Max nTPM: 236.5
Min nTPM: 11.9
Std nTPM: 48.5
Median nTPM: 101.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 236.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 232.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 221.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 218.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 217.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 216.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 211.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 209.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 207.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 207.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 206.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 206.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 204.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 203.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 201.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 196.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 190.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 189.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 185.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 185.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 183.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 182.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 179.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 174.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 174.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 173.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 171.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 171.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 170.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 169.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 166.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 164.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 161.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 161.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 161.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 160.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 159.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 157.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 157.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 156.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 155.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 155.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 155.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 154.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 154.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 153.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 153.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 152.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 152.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 150.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 150.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 148.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 148.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 148.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 147.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 142.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 142.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 141.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 140.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 139.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 138.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 136.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 136.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 134.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 134.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 133.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 132.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 132.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 131.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 131.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 130.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 130.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 130.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 129.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 129.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 128.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 128.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 127.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 127.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 126.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 126.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 126.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 125.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 124.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 122.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 122.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 121.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 121.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 121.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 121.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 119.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 118.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 117.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 117.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 115.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 115.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 115.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 115.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 114.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 114.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 114.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 114.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 114.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 114.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 113.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 113.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 113.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 112.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 111.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 111.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 111.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 110.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 109.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 108.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 108.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 107.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 106.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 105.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 105.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 105.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 104.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 101.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 101.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 101.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 101.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 101.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 100.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 100.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 100.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 100.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 100.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 99.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 99.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 99.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 98.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 98.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 98.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 98.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 97.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 95.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 95.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 94.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 93.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 93.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 92.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 92.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 92.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 91.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 91.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 91.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 91.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 89.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 89.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 88.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 87.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 85.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 85.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 84.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 84.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 84.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 84.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 83.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 82.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 82.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 81.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 81.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 81.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 81.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 80.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 80.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 80.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 79.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 79.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 78.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 76.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 76.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 76.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 75.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 75.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 74.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 74.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 74.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 73.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 72.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 72.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 70.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 70.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 69.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 69.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 68.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 68.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 68.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 68.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 68.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 67.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 66.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 65.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 65.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 63.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 62.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 62.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 61.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 61.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 59.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 58.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 57.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 57.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 54.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 54.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 54.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 53.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 52.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 51.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 51.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 50.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 50.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 50.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 49.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 49.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 49.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 48.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 48.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 47.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 46.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 44.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 43.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 42.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 41.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 41.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 40.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 39.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 37.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 37.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 35.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 33.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 32.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 31.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 30.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 29.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 27.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 26.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 24.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 23.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 21.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 12.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 11.9
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Brain - Putamen (basal ganglia)
Average nTPM: 53.4
Samples: 205

Max nTPM: 124.5
Min nTPM: 14.7
Std nTPM: 20.1
Median nTPM: 52.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 124.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 113.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 111.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 101.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 99.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 98.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 94.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 92.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 92.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 90.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 88.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 88.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 88.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 85.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 84.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 84.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 81.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 79.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 79.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 78.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 77.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 77.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 76.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 76.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 76.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 74.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 74.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 74.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 73.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 73.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 73.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 72.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 71.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 71.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 70.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 70.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 70.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 70.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 69.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 69.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 69.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 69.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 69.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 69.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 69.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 68.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 68.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 68.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 68.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 67.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 67.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 67.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 66.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 66.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 65.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 64.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 64.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 62.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 62.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 62.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 62.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 62.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 61.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 61.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 60.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 60.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 60.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 59.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 59.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 59.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 59.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 59.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 58.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 58.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 58.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 58.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 58.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 58.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 57.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 56.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 56.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 56.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 56.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 55.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 55.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 55.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 55.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 55.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 54.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 54.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 54.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 54.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 54.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 54.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 53.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 53.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 53.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 53.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 53.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 52.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 52.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 52.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 52.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 51.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 51.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 51.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 51.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 50.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 50.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 50.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 50.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 50.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 50.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 50.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 49.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 49.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 49.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 49.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 49.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 49.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 49.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 49.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 48.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 48.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 48.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 47.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 47.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 47.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 47.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 47.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 47.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 46.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 46.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 46.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 45.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 45.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 45.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 45.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 44.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 44.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 44.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 44.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 43.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 43.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 42.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 41.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 41.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 41.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 40.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 40.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 39.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 39.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 39.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 39.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 39.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 38.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 38.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 38.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 36.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 35.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 35.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 35.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 35.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 35.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 34.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 34.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 33.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 33.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 33.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 33.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 33.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 32.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 32.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 31.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 31.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 31.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 31.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 30.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 30.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 30.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 29.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 28.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 28.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 28.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 28.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 28.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 27.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 27.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 27.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 26.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 25.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 24.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 23.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 22.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 22.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 21.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 21.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 19.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 19.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 18.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 17.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 17.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 17.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 15.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 14.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

280.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 209.4
FF:10164-103B2 76 years, female 209.4
Nucleus accumbens
Scaled Tags Per Million: 114.5
FF:10037-101F1 23-56 years, mixed 114.5
Putamen
Scaled Tags Per Million: 280.9
FF:10176-103C5 60 years, female 280.9
Globus pallidus
Scaled Tags Per Million: 85.0
FF:10175-103C4 60 years, female 113.0
FF:10161-103A8 76 years, female 57.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

431.1
Pig sample Sample description nTPM
Caudate
nTPM: 414.9
Samples: 4

Max nTPM: 502.0
Min nTPM: 273.1
Sample A Female 478.7
Sample B Female 502.0
Sample C Male 405.8
Sample D Male 273.1
Putamen
nTPM: 172.3
Samples: 4

Max nTPM: 252.7
Min nTPM: 79.7
Sample A Female 252.7
Sample B Female 154.7
Sample C Male 79.7
Sample D Male 201.9
Septum
nTPM: 305.3
Samples: 4

Max nTPM: 576.9
Min nTPM: 63.3
Sample A Female 576.9
Sample B Female 481.5
Sample C Male 63.3
Sample D Male 99.5
Ventral pallidum
nTPM: 431.1
Samples: 4

Max nTPM: 589.1
Min nTPM: 201.6
Sample A Female 589.1
Sample B Female 489.5
Sample C Male 201.6
Sample D Male 444.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 96.3
Samples: 4

Max nTPM: 120.6
Min nTPM: 60.8
Sample A Male 94.9
Sample B Male 120.6
Sample C Female 60.8
Sample D Female 109.0
Septum
nTPM: 74.5
Samples: 4

Max nTPM: 82.8
Min nTPM: 64.6
Sample A Male 75.3
Sample B Male 82.8
Sample C Female 75.3
Sample D Female 64.6
Ventral forebrain
nTPM: 191.0
Samples: 4

Max nTPM: 248.2
Min nTPM: 142.7
Sample A Male 168.5
Sample B Male 204.5
Sample C Female 248.2
Sample D Female 142.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.3
74881161 Antisense, RP_060220_01_A10, Mouse strain C57BL/6J (56 days, male) 10.1
68924527 Antisense, RP_050303_02_E06, Mouse strain C57BL/6J (56 days, male) 8.5
Pallidum
Expression energy: 7.2
74881161 Antisense, RP_060220_01_A10, Mouse strain C57BL/6J (56 days, male) 7.6
68924527 Antisense, RP_050303_02_E06, Mouse strain C57BL/6J (56 days, male) 6.8

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