HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.1 nTPM
HPA Brain:51.6 nTPM
GTEx:18.1 nTPM
FANTOM5:108.0 Scaled Tags Per Million
Pig:41.4 nTPM
Mouse:152.2 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052363
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 51.6
Sample id Sample description nTPM
Hippocampus
nTPM: 31.1
1898 Male, age 80, left hemisphere 48.7
2621 Female, age 67, right hemisphere 36.0
1855 Male, age 76, left hemisphere 30.3
2148 Female, age 91, left hemisphere 27.0
1911 Female, age 85, right hemisphere 25.4
2529 Female, age 94, left hemisphere 19.2
Dentate gyrus
nTPM: 34.0
1927 Female, age 91, both hemispheres 52.0
2010 Male, age 76, both hemispheres 35.9
2528 Male, age 74, both hemispheres 29.9
2531 Female, age 67, both hemispheres 29.9
2246 Female, age 85, both hemispheres 28.8
2530 Female, age 94, left hemisphere 27.5
Entorhinal gyrus
nTPM: 35.4
1938 Female, age 85, left hemisphere 44.9
2764 Male, age 80, right hemisphere 43.1
2613 Female, age 94, left hemisphere 41.2
1787 Male, age 76, left hemisphere 34.3
2686 Male, age 75, right hemisphere 26.0
2117 Female, age 91, right hemisphere 23.0
Hippocampus, CA1
nTPM: 38.7
2749 Male, age 80, left hemisphere 64.5
1873 Female, age 85, both hemispheres 38.3
2527 Male, age 74, both hemispheres 36.5
2045 Male, age 76, both hemispheres 28.9
2082 Female, age 91, right hemisphere 25.4
Hippocampus, CA2
nTPM: 36.6
1892 Male, age 76, both hemispheres 54.8
1963 Male, age 80, left hemisphere 44.7
2249 Male, age 74, both hemispheres 36.7
2437 Female, age 94, left hemisphere 30.3
1940 Female, age 85, left hemisphere 28.6
2113 Female, age 91, right hemisphere 24.6
Hippocampus, CA3
nTPM: 35.0
2137 Male, age 80, left hemisphere 42.2
2436 Male, age 74, both hemispheres 40.4
1867 Male, age 76, both hemispheres 39.1
2620 Female, age 94, left hemisphere 35.0
1891 Female, age 85, both hemispheres 28.3
2861 Female, age 67, both hemispheres 25.1
Parahippocampal cortex
nTPM: 38.3
1850 Male, age 80, both hemispheres 51.2
1990 Female, age 91, right hemisphere 45.6
1933 Female, age 85, both hemispheres 44.0
2250 Female, age 67, right hemisphere 42.5
2693 Female, age 94, both hemispheres 40.5
2245 Female, age 91, both hemispheres 38.1
2532 Female, age 72, left hemisphere 34.7
2622 Female, age 67, right hemisphere 30.7
2018 Male, age 76, both hemispheres 29.7
2692 Male, age 74, both hemispheres 26.4
Perirhinal gyrus
nTPM: 51.6
1847 Female, age 91, left hemisphere 67.3
1841 Female, age 85, right hemisphere 53.2
1794 Male, age 80, right hemisphere 51.8
2521 Female, age 94, right hemisphere 49.8
2848 Male, age 76, right hemisphere 36.0
Subiculum
nTPM: 30.5
1977 Female, age 85, both hemispheres 41.0
2438 Female, age 94, left hemisphere 39.7
1901 Male, age 80, both hemispheres 36.2
2619 Male, age 74, both hemispheres 28.7
2729 Female, age 91, right hemisphere 19.3
2042 Male, age 76, both hemispheres 18.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 18.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.1
Samples: 197

Max nTPM: 50.4
Min nTPM: 2.0
Std nTPM: 11.2
Median nTPM: 14.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 50.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 49.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 47.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 45.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 44.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 44.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 43.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 42.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 42.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 41.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 40.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 108.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.0
FF:10169-103B7 60 years, female 158.9
FF:10153-102I9 76 years, female 57.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 41.4
Pig sample Sample description nTPM
Subiculum
nTPM: 32.5
Samples: 4

Max nTPM: 45.2
Min nTPM: 27.4
Sample A Female 45.2
Sample B Female 27.4
Sample C Male 30.1
Sample D Male 27.4
Dorsal hippocampus
nTPM: 41.5
Samples: 4

Max nTPM: 53.2
Min nTPM: 29.2
Sample A Female 53.2
Sample B Female 42.6
Sample C Male 40.8
Sample D Male 29.2
Entorhinal cortex
nTPM: 35.7
Samples: 4

Max nTPM: 42.6
Min nTPM: 32.6
Sample A Female 34.2
Sample B Female 42.6
Sample C Male 32.6
Sample D Male 33.2
Ventral hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 44.5
Min nTPM: 25.0
Sample A Female 44.5
Sample B Female 25.0
Sample C Male 33.3
Sample D Male 39.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 152.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 152.2
Samples: 4

Max nTPM: 163.9
Min nTPM: 142.5
Sample A Male 153.7
Sample B Male 163.9
Sample C Female 142.5
Sample D Female 148.7
Hippocampal formation
nTPM: 132.7
Samples: 4

Max nTPM: 149.0
Min nTPM: 117.6
Sample A Male 149.0
Sample B Male 132.4
Sample C Female 131.7
Sample D Female 117.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
81790732 Antisense, RP_090820_01_A06, Mouse strain C57BL/6J (56 days, male) 5.5
498 Antisense, RP_Baylor_102818, Mouse strain C57BL/6J (56 days, male) 3.5
499 Antisense, RP_Baylor_102818, Mouse strain C57BL/6J (56 days, male) 3.2

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