HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:41.4 nTPM
HPA Brain:67.0 nTPM
GTEx:41.4 nTPM
FANTOM5:87.6 Scaled Tags Per Million
Pig:46.0 nTPM
Mouse:42.0 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013958
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 67.0
Sample id Sample description nTPM
Hippocampus
nTPM: 64.2
1855 Male, age 76, left hemisphere 76.1
2148 Female, age 91, left hemisphere 65.8
1911 Female, age 85, right hemisphere 64.6
2529 Female, age 94, left hemisphere 63.5
1898 Male, age 80, left hemisphere 62.4
2621 Female, age 67, right hemisphere 53.0
Dentate gyrus
nTPM: 61.9
2010 Male, age 76, both hemispheres 72.8
1927 Female, age 91, both hemispheres 64.8
2530 Female, age 94, left hemisphere 63.6
2246 Female, age 85, both hemispheres 61.1
2531 Female, age 67, both hemispheres 59.5
2528 Male, age 74, both hemispheres 49.7
Entorhinal gyrus
nTPM: 58.0
2686 Male, age 75, right hemisphere 66.5
2117 Female, age 91, right hemisphere 64.8
1938 Female, age 85, left hemisphere 62.7
1787 Male, age 76, left hemisphere 53.4
2764 Male, age 80, right hemisphere 50.7
2613 Female, age 94, left hemisphere 50.0
Hippocampus, CA1
nTPM: 67.0
2045 Male, age 76, both hemispheres 95.1
1873 Female, age 85, both hemispheres 74.4
2749 Male, age 80, left hemisphere 64.4
2082 Female, age 91, right hemisphere 52.3
2527 Male, age 74, both hemispheres 49.0
Hippocampus, CA2
nTPM: 59.4
1892 Male, age 76, both hemispheres 73.8
1963 Male, age 80, left hemisphere 70.7
1940 Female, age 85, left hemisphere 57.8
2113 Female, age 91, right hemisphere 55.0
2437 Female, age 94, left hemisphere 51.5
2249 Male, age 74, both hemispheres 47.6
Hippocampus, CA3
nTPM: 59.4
1867 Male, age 76, both hemispheres 79.9
1891 Female, age 85, both hemispheres 74.5
2137 Male, age 80, left hemisphere 58.2
2861 Female, age 67, both hemispheres 55.0
2620 Female, age 94, left hemisphere 52.2
2436 Male, age 74, both hemispheres 36.3
Parahippocampal cortex
nTPM: 49.5
1990 Female, age 91, right hemisphere 57.2
2018 Male, age 76, both hemispheres 55.9
1850 Male, age 80, both hemispheres 55.4
2692 Male, age 74, both hemispheres 51.3
1933 Female, age 85, both hemispheres 49.8
2245 Female, age 91, both hemispheres 49.5
2532 Female, age 72, left hemisphere 48.5
2622 Female, age 67, right hemisphere 45.4
2250 Female, age 67, right hemisphere 41.6
2693 Female, age 94, both hemispheres 40.4
Perirhinal gyrus
nTPM: 45.3
1847 Female, age 91, left hemisphere 53.0
1841 Female, age 85, right hemisphere 48.5
2848 Male, age 76, right hemisphere 46.1
1794 Male, age 80, right hemisphere 42.6
2521 Female, age 94, right hemisphere 36.4
Subiculum
nTPM: 59.5
2729 Female, age 91, right hemisphere 68.0
2042 Male, age 76, both hemispheres 65.9
1901 Male, age 80, both hemispheres 60.5
2438 Female, age 94, left hemisphere 60.4
1977 Female, age 85, both hemispheres 56.5
2619 Male, age 74, both hemispheres 45.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 41.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.4
Samples: 197

Max nTPM: 111.7
Min nTPM: 13.9
Std nTPM: 15.8
Median nTPM: 38.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 111.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 111.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 107.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 97.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 78.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 77.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 75.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 73.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 71.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 68.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 68.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 87.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.6
FF:10153-102I9 76 years, female 91.1
FF:10169-103B7 60 years, female 84.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 46.0
Pig sample Sample description nTPM
Subiculum
nTPM: 46.0
Samples: 4

Max nTPM: 48.5
Min nTPM: 43.0
Sample A Female 47.5
Sample B Female 48.5
Sample C Male 43.0
Sample D Male 45.1
Dorsal hippocampus
nTPM: 38.2
Samples: 4

Max nTPM: 39.3
Min nTPM: 36.1
Sample A Female 36.1
Sample B Female 39.1
Sample C Male 38.3
Sample D Male 39.3
Entorhinal cortex
nTPM: 44.6
Samples: 4

Max nTPM: 45.6
Min nTPM: 43.5
Sample A Female 44.9
Sample B Female 45.6
Sample C Male 44.4
Sample D Male 43.5
Ventral hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 45.9
Min nTPM: 36.3
Sample A Female 45.8
Sample B Female 45.9
Sample C Male 36.4
Sample D Male 36.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 42.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.4
Samples: 4

Max nTPM: 38.4
Min nTPM: 32.3
Sample A Male 38.4
Sample B Male 32.3
Sample C Female 38.2
Sample D Female 32.6
Hippocampal formation
nTPM: 42.0
Samples: 4

Max nTPM: 43.7
Min nTPM: 40.0
Sample A Male 42.7
Sample B Male 40.0
Sample C Female 43.7
Sample D Female 41.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
77800943 Antisense, RP_070219_01_B07, Mouse strain C57BL/6J (56 days, male) 1.6
67815553 Antisense, RP_040920_02_A02, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org