We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PPARGC1A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PPARGC1A
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PPARGC1A
Synonyms PGC-1alpha, PGC1, PGC1A, PPARAGCIalpha, PPARGC1
Gene descriptioni

Full gene name according to HGNC.

PPARG coactivator 1 alpha
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband p15.2
Chromosome location (bp) 23755041 - 23904089
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000109819 (version 109)
Entrez gene 10891
HGNC HGNC:9237
UniProt Q9UBK2 (UniProt - Evidence at protein level)
neXtProt NX_Q9UBK2
GeneCards PPARGC1A
Antibodypedia PPARGC1A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Transcriptional coactivator for steroid receptors and nuclear receptors 1, 2, 3. Greatly increases the transcriptional activity of PPARG and thyroid hormone receptor on the uncoupling protein promoter 4, 5, 6. Can regulate key mitochondrial genes that contribute to the program of adaptive thermogenesis 7, 8, 9. Plays an essential role in metabolic reprogramming in response to dietary availability through coordination of the expression of a wide array of genes involved in glucose and fatty acid metabolism 10, 11, 12. Acts as a key regulator of gluconeogenesis: stimulates hepatic gluconeogenesis by increasing the expression of gluconeogenic enzymes, and acting together with FOXO1 to promote the fasting gluconeogenic program 13, 14. Induces the expression of PERM1 in the skeletal muscle in an ESRRA-dependent manner 15. Also involved in the integration of the circadian rhythms and energy metabolism (By similarity). Required for oscillatory expression of clock genes, such as BMAL1 and NR1D1, through the coactivation of RORA and RORC, and metabolic genes, such as PDK4 and PEPCK (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Activator, RNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Biological rhythms, Transcription, Transcription regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a transcriptional coactivator that regulates the genes involved in energy metabolism. This protein interacts with PPARgamma, which permits the interaction of this protein with multiple transcription factors. This protein can interact with, and regulate the activities of, cAMP response element binding protein (CREB) and nuclear respiratory factors (NRFs). It provides a direct link between external physiological stimuli and the regulation of mitochondrial biogenesis, and is a major factor that regulates muscle fiber type determination. This protein may be also involved in controlling blood pressure, regulating cellular cholesterol homoeostasis, and the development of obesity. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PPARGC1A-201
ENSP00000264867
ENST00000264867
Q9UBK2
[Direct mapping] Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Show all
A0A024R9Q9
[Target identity:100%; Query identity:100%] Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000785 [chromatin]
GO:0001659 [temperature homeostasis]
GO:0001678 [cellular glucose homeostasis]
GO:0002021 [response to dietary excess]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003712 [transcription coregulator activity]
GO:0003713 [transcription coactivator activity]
GO:0003723 [RNA binding]
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006094 [gluconeogenesis]
GO:0006351 [DNA-templated transcription]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006367 [transcription initiation at RNA polymerase II promoter]
GO:0006397 [mRNA processing]
GO:0007005 [mitochondrion organization]
GO:0007586 [digestion]
GO:0008134 [transcription factor binding]
GO:0008380 [RNA splicing]
GO:0010628 [positive regulation of gene expression]
GO:0010822 [positive regulation of mitochondrion organization]
GO:0014850 [response to muscle activity]
GO:0016605 [PML body]
GO:0016922 [nuclear receptor binding]
GO:0019395 [fatty acid oxidation]
GO:0022904 [respiratory electron transport chain]
GO:0030374 [nuclear receptor coactivator activity]
GO:0031490 [chromatin DNA binding]
GO:0031625 [ubiquitin protein ligase binding]
GO:0032922 [circadian regulation of gene expression]
GO:0034599 [cellular response to oxidative stress]
GO:0035066 [positive regulation of histone acetylation]
GO:0042594 [response to starvation]
GO:0042752 [regulation of circadian rhythm]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0043565 [sequence-specific DNA binding]
GO:0045333 [cellular respiration]
GO:0045722 [positive regulation of gluconeogenesis]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046321 [positive regulation of fatty acid oxidation]
GO:0048511 [rhythmic process]
GO:0048662 [negative regulation of smooth muscle cell proliferation]
GO:0050821 [protein stabilization]
GO:0050873 [brown fat cell differentiation]
GO:0051091 [positive regulation of DNA-binding transcription factor activity]
GO:0051402 [neuron apoptotic process]
GO:0060612 [adipose tissue development]
GO:0061629 [RNA polymerase II-specific DNA-binding transcription factor binding]
GO:0065003 [protein-containing complex assembly]
GO:0097009 [energy homeostasis]
GO:0120162 [positive regulation of cold-induced thermogenesis]
GO:0140297 [DNA-binding transcription factor binding]
GO:1901215 [negative regulation of neuron death]
GO:1901857 [positive regulation of cellular respiration]
GO:1901860 [positive regulation of mitochondrial DNA metabolic process]
GO:1901863 [positive regulation of muscle tissue development]
GO:2001171 [positive regulation of ATP biosynthetic process]
Show all
798 aa
91 kDa
No 0
PPARGC1A-206
ENSP00000424181
ENST00000507380
D6RBF3
[Direct mapping] Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0003712 [transcription coregulator activity]
GO:0005102 [signaling receptor binding]
GO:0005634 [nucleus]
GO:0006351 [DNA-templated transcription]
GO:0007005 [mitochondrion organization]
GO:0008134 [transcription factor binding]
Show all
99 aa
11.2 kDa
No 0
PPARGC1A-216
ENSP00000479729
ENST00000612355
A0A087WVW3
[Direct mapping] Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0003712 [transcription coregulator activity]
GO:0005102 [signaling receptor binding]
GO:0005634 [nucleus]
GO:0006351 [DNA-templated transcription]
GO:0007005 [mitochondrion organization]
GO:0008134 [transcription factor binding]
Show all
267 aa
29.5 kDa
No 0
PPARGC1A-217
ENSP00000481498
ENST00000613098
Q9UBK2
[Direct mapping] Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000785 [chromatin]
GO:0001659 [temperature homeostasis]
GO:0001678 [cellular glucose homeostasis]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003712 [transcription coregulator activity]
GO:0003713 [transcription coactivator activity]
GO:0003723 [RNA binding]
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006094 [gluconeogenesis]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006367 [transcription initiation at RNA polymerase II promoter]
GO:0006397 [mRNA processing]
GO:0007005 [mitochondrion organization]
GO:0007586 [digestion]
GO:0008134 [transcription factor binding]
GO:0008380 [RNA splicing]
GO:0010628 [positive regulation of gene expression]
GO:0010822 [positive regulation of mitochondrion organization]
GO:0014850 [response to muscle activity]
GO:0016605 [PML body]
GO:0016922 [nuclear receptor binding]
GO:0019395 [fatty acid oxidation]
GO:0022904 [respiratory electron transport chain]
GO:0030374 [nuclear receptor coactivator activity]
GO:0031490 [chromatin DNA binding]
GO:0031625 [ubiquitin protein ligase binding]
GO:0032922 [circadian regulation of gene expression]
GO:0034599 [cellular response to oxidative stress]
GO:0035066 [positive regulation of histone acetylation]
GO:0042594 [response to starvation]
GO:0042752 [regulation of circadian rhythm]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0043565 [sequence-specific DNA binding]
GO:0045333 [cellular respiration]
GO:0045722 [positive regulation of gluconeogenesis]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046321 [positive regulation of fatty acid oxidation]
GO:0048511 [rhythmic process]
GO:0048662 [negative regulation of smooth muscle cell proliferation]
GO:0050821 [protein stabilization]
GO:0050873 [brown fat cell differentiation]
GO:0051091 [positive regulation of DNA-binding transcription factor activity]
GO:0065003 [protein-containing complex assembly]
GO:0097009 [energy homeostasis]
GO:0120162 [positive regulation of cold-induced thermogenesis]
GO:0140297 [DNA-binding transcription factor binding]
GO:1901215 [negative regulation of neuron death]
GO:2001171 [positive regulation of ATP biosynthetic process]
Show all
671 aa
77.1 kDa
No 0
PPARGC1A-218
ENSP00000477921
ENST00000617484
A0A087WTJ3
[Direct mapping] Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0003712 [transcription coregulator activity]
GO:0005102 [signaling receptor binding]
GO:0005634 [nucleus]
GO:0006351 [DNA-templated transcription]
GO:0007005 [mitochondrion organization]
GO:0008134 [transcription factor binding]
Show all
297 aa
32.7 kDa
No 0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org