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DDX25
HPA
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  • DDX25
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

DDX25
Synonyms GRTH
Gene descriptioni

Full gene name according to HGNC.

DEAD-box helicase 25
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q24.2
Chromosome location (bp) 125903348 - 125943702
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000109832 (version 109)
Entrez gene 29118
HGNC HGNC:18698
UniProt Q9UHL0 (UniProt - Evidence at protein level)
neXtProt NX_Q9UHL0
GeneCards DDX25
Antibodypedia DDX25 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

ATP-dependent RNA helicase. Required for mRNA export and translation regulation during spermatid development (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Developmental protein, Helicase, Hydrolase, RNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation, mRNA transport, Spermatogenesis, Translation regulation, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure, such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of the DEAD box protein family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a member of this family. The encoded protein is a gonadotropin-regulated and developmentally expressed testicular RNA helicase. It may serve to maintain testicular functions related to steroidogenesis and spermatogenesis. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
DDX25-201
ENSP00000263576
ENST00000263576
Q9UHL0
[Direct mapping] ATP-dependent RNA helicase DDX25
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0003724 [RNA helicase activity]
GO:0004386 [helicase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006406 [mRNA export from nucleus]
GO:0006417 [regulation of translation]
GO:0007283 [spermatogenesis]
GO:0007286 [spermatid development]
GO:0010494 [cytoplasmic stress granule]
GO:0016787 [hydrolase activity]
GO:0016887 [ATP hydrolysis activity]
GO:0016973 [poly(A)+ mRNA export from nucleus]
GO:0030154 [cell differentiation]
GO:0033391 [chromatoid body]
GO:0051028 [mRNA transport]
Show all
483 aa
54.7 kDa
No 0
DDX25-202
ENSP00000490224
ENST00000525943
Q9UHL0
[Direct mapping] ATP-dependent RNA helicase DDX25
Show all
A0A384NYS3
[Target identity:100%; Query identity:100%] Epididymis secretory sperm binding protein
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0003724 [RNA helicase activity]
GO:0004386 [helicase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006406 [mRNA export from nucleus]
GO:0006417 [regulation of translation]
GO:0007283 [spermatogenesis]
GO:0007286 [spermatid development]
GO:0010494 [cytoplasmic stress granule]
GO:0016787 [hydrolase activity]
GO:0016887 [ATP hydrolysis activity]
GO:0016973 [poly(A)+ mRNA export from nucleus]
GO:0030154 [cell differentiation]
GO:0033391 [chromatoid body]
GO:0051028 [mRNA transport]
Show all
369 aa
42 kDa
No 0
DDX25-203
ENSP00000436087
ENST00000526875
E9PR46
[Direct mapping] RNA helicase
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003724 [RNA helicase activity]
GO:0004386 [helicase activity]
GO:0005524 [ATP binding]
GO:0016787 [hydrolase activity]
Show all
407 aa
46.4 kDa
No 0
DDX25-204
ENSP00000432800
ENST00000530129
H0YD26
[Direct mapping] RNA helicase
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003724 [RNA helicase activity]
GO:0004386 [helicase activity]
GO:0005524 [ATP binding]
GO:0016787 [hydrolase activity]
Show all
191 aa
21 kDa
No 0
DDX25-205
ENSP00000463333
ENST00000530414
J3QL17
[Direct mapping] RNA helicase
Show all
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003724 [RNA helicase activity]
GO:0004386 [helicase activity]
GO:0005524 [ATP binding]
GO:0016787 [hydrolase activity]
Show all
468 aa
52.8 kDa
No 0

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