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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:9.7 nTPM
HPA Brain:34.0 nTPM
GTEx:9.7 nTPM
FANTOM5:77.8 Scaled Tags Per Million
Pig:10.5 nTPM
Mouse:16.0 nTPM
Allen mouse:0.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB025364
Glial cells Not detected
Neuronal cells Low


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 32.3
2846 Female, age 79, unknown 42.3
1857 Female, age 85, left hemisphere 36.3
1781 Male, age 74, unknown 31.9
1854 Male, age 80, left hemisphere 31.8
2289 Male, age 61, right hemisphere 31.6
2290 Female, age 72, unknown 31.2
2288 Male, age 75, left hemisphere 27.4
2481 Female, age 94, left hemisphere 26.1
Globus pallidus, externus
nTPM: 31.1
2395 Male, age 75, both hemispheres 41.3
2567 Female, age 72, unknown 32.3
1996 Male, age 80, right hemisphere 30.3
2772 Female, age 79, unknown 29.7
2646 Male, age 61, right hemisphere 22.1
Globus pallidus, internus
nTPM: 29.4
2037 Male, age 80, right hemisphere 35.0
2566 Female, age 72, unknown 31.9
1818 Male, age 74, unknown 31.4
2111 Female, age 85, right hemisphere 29.5
2778 Female, age 91, both hemispheres 29.1
2483 Female, age 94, right hemisphere 24.5
2287 Male, age 75, right hemisphere 24.4
Nucleus accumbens
nTPM: 30.3
1856 Female, age 91, right hemisphere 33.3
1806 Female, age 85, left hemisphere 32.9
2698 Female, age 72, unknown 31.3
1783 Male, age 74, unknown 31.0
2391 Female, age 94, left hemisphere 30.7
2732 Male, age 80, right hemisphere 30.2
2824 Male, age 61, right hemisphere 27.1
2286 Male, age 75, left hemisphere 26.0
Nucleus basalis of Meynert
nTPM: 29.5
2393 Male, age 80, right hemisphere 34.4
2484 Female, age 94, left hemisphere 31.9
2821 Male, age 75, both hemispheres 31.4
2569 Male, age 61, both hemispheres 20.3
Nucleus of the diagonal band
nTPM: 31.5
2195 Female, age 85, both hemispheres 33.2
1979 Male, age 74, unknown 32.0
1812 Female, age 91, both hemispheres 31.7
2029 Male, age 61, right hemisphere 31.0
2775 Male, age 80, right hemisphere 29.5
Putamen
nTPM: 31.5
2466 Female, age 79, unknown 38.9
1937 Female, age 91, right hemisphere 33.9
1829 Male, age 74, unknown 33.2
1838 Male, age 80, right hemisphere 30.7
2482 Female, age 94, left hemisphere 30.3
2489 Female, age 72, unknown 29.4
2647 Male, age 75, left hemisphere 24.1
Septal nuclei
nTPM: 33.6
2009 Female, age 91, both hemispheres 35.8
2629 Female, age 94, right hemisphere 35.7
2199 Male, age 80, right hemisphere 34.2
2059 Female, age 85, both hemispheres 33.4
2394 Male, age 61, left hemisphere 33.0
2031 Female, age 72, unknown 31.9
1960 Male, age 74, unknown 31.6
Stria terminalis, bed nucleus
nTPM: 34.0
2486 Female, age 94, both hemispheres 34.6
2201 Male, age 74, unknown 34.2
1974 Female, age 91, both hemispheres 33.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 9.7
Samples: 246

Max nTPM: 58.9
Min nTPM: 3.0
Std nTPM: 6.0
Median nTPM: 7.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 58.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 31.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 29.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 25.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 25.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 24.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 23.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 22.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 22.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 21.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 21.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 20.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 20.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 19.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 19.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 19.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 19.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 19.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 18.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 18.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 18.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 18.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 18.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 18.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 17.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 17.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 17.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 17.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 17.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 17.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 17.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 16.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 16.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 16.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 16.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 16.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 16.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 16.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 16.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 14.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 14.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 14.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 14.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 14.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 14.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 14.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 13.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 13.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 13.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 13.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 13.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 12.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 12.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 12.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 12.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 12.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 12.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 12.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 11.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 11.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 11.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 11.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 11.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 11.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 11.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 11.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 11.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 10.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 10.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 10.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 10.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 10.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 10.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 10.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 10.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 10.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 10.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 10.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 10.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 9.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 9.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 9.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 9.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 9.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 9.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 9.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 9.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 9.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 9.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 9.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 9.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 9.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 9.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 9.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 8.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 8.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 8.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 8.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 8.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 8.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 8.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 8.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 8.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 8.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 8.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 8.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 8.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 8.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 8.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 8.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 8.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 8.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 8.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 8.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 8.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 8.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 8.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 8.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 7.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 7.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 7.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 7.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 7.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 7.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 7.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 7.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 7.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 7.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 7.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 7.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 7.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 7.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 7.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 7.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 7.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 7.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 7.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 7.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 7.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 7.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 7.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 7.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 7.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 7.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 7.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 7.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 7.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 6.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 6.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 6.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 6.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 6.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 6.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 6.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 6.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 6.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 6.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 6.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 6.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 6.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 6.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 6.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 6.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 6.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 6.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 6.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 6.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 6.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 6.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 6.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 6.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 6.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 6.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 6.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 6.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 6.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 6.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 6.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 6.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 6.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 6.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 5.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 5.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 5.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 5.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 5.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 5.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 5.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 5.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 5.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 5.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 5.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 5.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 5.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 5.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 5.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 5.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 5.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 5.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 5.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 5.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 5.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 5.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 5.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 5.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 5.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 5.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 5.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 5.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 5.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 5.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 5.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 5.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 5.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 5.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 5.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 5.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 5.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 4.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 4.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 4.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 4.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 4.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 4.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 4.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 4.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 4.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 4.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 4.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 4.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 4.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 4.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 4.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 4.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 4.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 3.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 3.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 3.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 3.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 3.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 3.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 3.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 3.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 3.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 9.3
Samples: 246

Max nTPM: 47.4
Min nTPM: 2.6
Std nTPM: 5.9
Median nTPM: 7.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 47.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 33.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 32.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 32.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 31.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 27.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 25.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 22.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 20.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 20.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 20.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 19.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 19.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 19.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 19.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 19.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 19.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 18.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 18.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 18.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 17.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 17.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 17.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 17.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 17.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 16.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 16.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 16.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 15.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 15.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 15.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 14.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 14.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 14.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 14.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 14.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 13.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 13.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 13.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 13.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 13.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 13.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 13.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 13.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 13.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 13.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 13.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 13.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 13.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 13.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 12.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 12.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 12.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 12.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 12.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 12.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 12.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 12.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 12.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 11.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 11.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 11.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 11.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 11.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 11.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 11.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 11.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 10.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 10.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 10.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 10.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 10.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 10.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 10.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 10.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 10.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 10.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 10.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 10.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 10.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 10.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 9.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 9.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 9.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 9.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 9.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 9.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 9.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 9.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 9.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 9.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 9.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 9.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 9.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 9.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 8.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 8.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 8.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 8.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 8.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 8.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 8.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 8.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 8.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 8.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 8.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 8.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 8.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 8.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 7.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 7.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 7.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 7.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 7.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 7.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 7.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 7.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 7.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 7.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 7.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 7.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 7.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 7.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 7.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 7.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 7.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 7.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 6.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 6.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 6.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 6.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 6.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 6.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 6.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 6.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 6.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 6.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 6.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 6.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 6.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 6.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 6.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 6.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 6.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 6.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 6.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 6.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 6.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 6.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 6.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 6.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 6.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 6.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 6.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 6.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 6.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 6.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 6.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 6.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 6.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 6.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 6.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 6.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 6.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 5.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 5.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 5.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 5.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 5.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 5.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 5.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 5.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 5.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 5.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 5.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 5.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 5.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 5.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 5.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 5.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 5.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 5.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 5.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 5.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 5.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 5.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 5.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 5.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 5.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 5.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 5.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 5.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 5.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 5.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 5.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 5.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 5.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 5.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 5.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 5.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 5.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 4.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 4.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 4.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 4.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 4.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 4.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 4.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 4.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 4.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 4.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 4.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 4.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 4.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 4.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 4.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 4.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 4.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 4.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 4.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 4.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 4.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 4.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 4.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 4.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 4.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 3.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 3.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 3.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 3.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 3.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 3.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 3.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 3.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 3.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 3.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 3.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 3.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 3.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 3.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 3.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 2.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 2.6
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Brain - Putamen (basal ganglia)
Average nTPM: 8.7
Samples: 205

Max nTPM: 36.5
Min nTPM: 2.7
Std nTPM: 4.8
Median nTPM: 7.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 36.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 25.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 24.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 22.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 22.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 22.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 21.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 21.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 20.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 20.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 17.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 16.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 16.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 16.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 16.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 16.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 16.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 15.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 15.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 15.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 15.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 14.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 14.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 14.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 14.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 14.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 14.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 13.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 13.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 13.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 12.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 12.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 12.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 11.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 11.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 11.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 11.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 11.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 11.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 10.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 10.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 10.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 10.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 10.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 10.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 10.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 10.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 10.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 10.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 10.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 10.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 10.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 10.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 10.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 9.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 9.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 9.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 9.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 9.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 9.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 9.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 9.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 9.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 9.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 9.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 9.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 9.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 9.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 9.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 8.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 8.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 8.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 8.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 8.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 8.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 8.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 8.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 8.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 8.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 8.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 8.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 8.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 8.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 7.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 7.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 7.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 7.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 7.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 7.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 7.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 7.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 7.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 7.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 7.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 7.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 7.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 7.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 7.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 7.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 7.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 7.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 7.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 7.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 7.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 6.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 6.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 6.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 6.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 6.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 6.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 6.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 6.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 6.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 6.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 6.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 6.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 6.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 6.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 6.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 6.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 6.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 6.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 6.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 6.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 6.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 6.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 6.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 6.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 6.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 6.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 6.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 6.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 5.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 5.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 5.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 5.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 5.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 5.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 5.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 5.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 5.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 5.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 5.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 5.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 5.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 5.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 5.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 5.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 5.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 5.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 5.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 5.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 5.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 5.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 5.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 5.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 5.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 5.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 5.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 5.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 5.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 5.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 4.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 4.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 4.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 4.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 4.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 4.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 4.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 4.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 4.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 4.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 4.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 4.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 4.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 4.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 4.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 4.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 4.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 4.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 4.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 4.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 4.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 4.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 4.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 4.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 4.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 4.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 3.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 3.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 3.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 3.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 3.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 3.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 3.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 3.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 3.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 3.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 2.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

77.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 42.8
FF:10164-103B2 76 years, female 42.8
Nucleus accumbens
Scaled Tags Per Million: 25.3
FF:10037-101F1 23-56 years, mixed 25.3
Putamen
Scaled Tags Per Million: 28.0
FF:10176-103C5 60 years, female 28.0
Globus pallidus
Scaled Tags Per Million: 77.8
FF:10161-103A8 76 years, female 85.9
FF:10175-103C4 60 years, female 69.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.5
Pig sample Sample description nTPM
Caudate
nTPM: 9.6
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.5
Sample A Female 10.2
Sample B Female 8.5
Sample C Male 9.0
Sample D Male 10.6
Putamen
nTPM: 9.3
Samples: 4

Max nTPM: 10.1
Min nTPM: 8.2
Sample A Female 9.5
Sample B Female 10.1
Sample C Male 8.2
Sample D Male 9.4
Septum
nTPM: 10.5
Samples: 4

Max nTPM: 11.2
Min nTPM: 9.8
Sample A Female 10.2
Sample B Female 9.8
Sample C Male 11.2
Sample D Male 10.6
Ventral pallidum
nTPM: 9.3
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.2
Sample A Female 10.7
Sample B Female 9.6
Sample C Male 7.2
Sample D Male 9.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 9.5
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.9
Sample A Male 10.5
Sample B Male 8.7
Sample C Female 7.9
Sample D Female 10.7
Septum
nTPM: 16.0
Samples: 4

Max nTPM: 19.8
Min nTPM: 10.6
Sample A Male 10.6
Sample B Male 19.8
Sample C Female 18.3
Sample D Female 15.4
Ventral forebrain
nTPM: 10.7
Samples: 4

Max nTPM: 11.7
Min nTPM: 10.2
Sample A Male 10.3
Sample B Male 10.7
Sample C Female 11.7
Sample D Female 10.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.3
69608220 Antisense, RP_050426_03_G05, Mouse strain C57BL/6J (56 days, male) 0.3
Pallidum
Expression energy: 0.1
69608220 Antisense, RP_050426_03_G05, Mouse strain C57BL/6J (56 days, male) 0.1

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