We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PRPF19
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PRPF19
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:75.8 nTPM
HPA Brain:126.7 nTPM
GTEx:75.8 nTPM
FANTOM5:129.5 Scaled Tags Per Million
Pig:71.3 nTPM
Mouse:149.9 nTPM
Allen mouse:10.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038051Antibody HPA059070Antibody CAB012448
Glial cells HighHighHigh
Neuronal cells HighMediumHigh






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 84.6
2288 Male, age 75, left hemisphere 105.0
1781 Male, age 74, unknown 93.2
2289 Male, age 61, right hemisphere 82.9
2846 Female, age 79, unknown 82.9
2290 Female, age 72, unknown 82.7
2481 Female, age 94, left hemisphere 79.0
1854 Male, age 80, left hemisphere 76.3
1857 Female, age 85, left hemisphere 75.0
Globus pallidus, externus
nTPM: 71.4
2772 Female, age 79, unknown 99.5
2395 Male, age 75, both hemispheres 71.6
1996 Male, age 80, right hemisphere 70.1
2646 Male, age 61, right hemisphere 68.4
2567 Female, age 72, unknown 47.1
Globus pallidus, internus
nTPM: 74.1
2287 Male, age 75, right hemisphere 96.3
1818 Male, age 74, unknown 89.3
2483 Female, age 94, right hemisphere 79.2
2778 Female, age 91, both hemispheres 68.4
2037 Male, age 80, right hemisphere 67.2
2566 Female, age 72, unknown 65.3
2111 Female, age 85, right hemisphere 53.0
Nucleus accumbens
nTPM: 87.4
1856 Female, age 91, right hemisphere 121.4
2286 Male, age 75, left hemisphere 98.1
1783 Male, age 74, unknown 89.3
2824 Male, age 61, right hemisphere 84.5
2698 Female, age 72, unknown 82.3
1806 Female, age 85, left hemisphere 82.0
2732 Male, age 80, right hemisphere 71.8
2391 Female, age 94, left hemisphere 70.3
Nucleus basalis of Meynert
nTPM: 73.5
2821 Male, age 75, both hemispheres 84.1
2484 Female, age 94, left hemisphere 79.8
2393 Male, age 80, right hemisphere 67.9
2569 Male, age 61, both hemispheres 62.4
Nucleus of the diagonal band
nTPM: 118.1
1812 Female, age 91, both hemispheres 128.7
2195 Female, age 85, both hemispheres 127.1
2775 Male, age 80, right hemisphere 124.6
2029 Male, age 61, right hemisphere 108.2
1979 Male, age 74, unknown 102.1
Putamen
nTPM: 79.1
1937 Female, age 91, right hemisphere 98.5
1838 Male, age 80, right hemisphere 86.4
2466 Female, age 79, unknown 86.2
2482 Female, age 94, left hemisphere 83.4
1829 Male, age 74, unknown 73.6
2647 Male, age 75, left hemisphere 68.9
2489 Female, age 72, unknown 56.7
Septal nuclei
nTPM: 107.4
2031 Female, age 72, unknown 136.5
1960 Male, age 74, unknown 132.3
2009 Female, age 91, both hemispheres 117.2
2629 Female, age 94, right hemisphere 115.4
2059 Female, age 85, both hemispheres 99.2
2394 Male, age 61, left hemisphere 79.0
2199 Male, age 80, right hemisphere 72.4
Stria terminalis, bed nucleus
nTPM: 126.7
1974 Female, age 91, both hemispheres 143.7
2486 Female, age 94, both hemispheres 120.1
2201 Male, age 74, unknown 116.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 63.1
Samples: 246

Max nTPM: 104.1
Min nTPM: 36.2
Std nTPM: 12.3
Median nTPM: 62.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 104.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 103.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 101.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 100.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 96.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 92.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 91.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 90.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 89.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 87.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 85.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 83.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 83.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 83.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 81.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 81.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 80.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 79.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 79.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 79.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 79.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 79.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 79.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 78.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 77.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 76.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 76.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 75.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 75.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 75.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 75.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 75.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 74.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 74.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 74.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 74.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 74.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 74.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 74.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 74.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 73.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 73.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 73.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 73.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 73.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 73.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 72.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 72.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 72.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 72.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 71.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 71.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 71.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 71.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 71.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 71.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 71.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 71.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 70.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 70.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 70.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 70.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 70.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 70.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 69.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 69.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 69.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 69.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 68.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 68.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 68.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 68.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 68.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 68.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 68.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 68.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 68.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 67.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 67.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 67.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 67.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 67.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 67.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 67.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 67.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 66.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 66.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 66.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 66.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 66.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 65.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 65.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 65.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 65.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 65.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 65.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 65.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 65.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 65.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 64.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 64.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 64.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 64.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 64.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 64.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 64.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 64.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 64.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 64.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 63.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 63.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 63.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 63.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 63.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 63.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 63.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 63.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 62.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 62.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 62.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 62.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 62.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 62.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 62.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 62.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 62.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 62.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 62.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 61.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 61.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 61.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 61.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 61.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 61.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 61.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 60.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 60.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 60.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 60.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 60.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 60.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 60.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 60.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 60.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 59.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 59.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 59.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 59.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 59.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 59.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 59.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 58.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 58.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 58.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 58.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 58.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 58.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 58.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 58.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 57.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 57.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 57.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 57.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 57.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 57.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 57.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 57.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 56.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 56.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 56.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 56.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 56.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 55.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 54.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 54.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 54.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 54.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 54.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 54.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 53.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 53.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 53.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 53.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 52.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 52.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 52.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 52.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 52.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 52.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 52.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 52.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 51.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 51.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 51.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 51.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 51.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 51.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 51.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 51.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 50.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 50.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 50.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 50.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 49.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 49.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 49.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 49.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 49.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 49.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 48.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 48.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 48.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 48.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 47.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 47.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 47.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 47.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 46.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 46.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 46.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 46.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 45.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 44.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 43.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 43.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 43.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 43.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 42.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 42.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 42.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 41.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 41.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 40.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 39.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 38.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 36.2
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 75.8
Samples: 246

Max nTPM: 147.8
Min nTPM: 36.3
Std nTPM: 18.4
Median nTPM: 74.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 147.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 140.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 130.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 129.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 122.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 120.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 115.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 114.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 112.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 111.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 109.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 108.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 106.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 106.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 106.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 104.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 104.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 104.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 103.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 103.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 102.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 101.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 101.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 101.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 101.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 100.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 100.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 99.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 95.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 95.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 95.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 95.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 94.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 94.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 94.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 93.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 92.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 92.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 92.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 92.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 92.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 91.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 91.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 91.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 91.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 91.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 90.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 90.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 90.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 90.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 88.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 88.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 88.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 88.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 87.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 87.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 87.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 87.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 87.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 87.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 87.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 87.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 87.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 86.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 86.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 86.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 85.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 85.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 85.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 85.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 84.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 84.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 84.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 83.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 83.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 83.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 83.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 83.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 83.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 83.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 83.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 82.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 82.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 82.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 82.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 82.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 81.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 81.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 81.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 81.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 80.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 80.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 80.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 80.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 80.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 79.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 79.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 78.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 78.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 78.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 78.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 78.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 78.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 77.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 77.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 77.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 77.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 77.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 76.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 76.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 76.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 76.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 76.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 76.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 75.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 75.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 75.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 75.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 75.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 74.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 74.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 74.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 74.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 73.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 73.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 73.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 73.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 73.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 72.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 72.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 72.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 72.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 71.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 71.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 71.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 70.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 70.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 70.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 70.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 70.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 70.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 70.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 70.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 69.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 69.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 69.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 69.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 69.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 69.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 69.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 68.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 68.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 68.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 68.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 68.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 68.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 68.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 67.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 67.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 67.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 67.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 67.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 66.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 66.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 66.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 66.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 65.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 65.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 65.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 65.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 65.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 65.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 64.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 64.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 64.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 64.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 64.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 64.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 64.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 64.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 64.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 64.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 63.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 63.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 63.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 62.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 62.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 61.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 61.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 61.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 61.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 60.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 60.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 60.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 59.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 59.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 59.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 58.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 58.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 58.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 58.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 58.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 58.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 57.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 57.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 57.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 57.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 57.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 57.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 57.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 57.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 56.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 56.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 56.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 55.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 55.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 55.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 55.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 55.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 55.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 54.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 54.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 54.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 54.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 53.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 53.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 52.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 52.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 50.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 50.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 50.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 50.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 50.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 50.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 49.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 49.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 48.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 48.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 46.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 46.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 45.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 44.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 43.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 38.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 36.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 36.3
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 68.4
Samples: 205

Max nTPM: 116.0
Min nTPM: 37.3
Std nTPM: 15.3
Median nTPM: 66.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 116.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 109.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 108.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 108.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 107.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 104.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 102.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 102.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 99.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 98.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 94.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 93.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 93.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 92.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 91.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 91.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 91.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 91.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 90.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 90.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 90.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 89.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 89.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 88.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 88.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 88.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 86.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 86.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 86.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 86.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 85.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 84.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 83.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 83.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 81.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 81.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 81.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 81.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 81.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 80.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 80.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 80.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 79.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 79.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 79.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 78.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 78.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 78.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 78.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 77.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 76.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 76.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 76.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 76.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 76.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 76.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 76.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 75.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 75.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 75.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 75.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 74.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 74.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 74.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 73.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 73.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 73.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 73.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 73.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 73.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 73.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 73.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 72.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 72.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 72.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 72.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 72.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 72.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 71.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 71.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 71.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 71.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 71.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 70.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 70.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 70.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 70.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 70.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 70.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 69.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 69.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 69.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 69.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 69.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 68.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 68.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 68.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 68.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 68.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 68.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 67.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 67.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 66.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 66.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 66.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 66.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 66.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 66.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 66.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 65.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 65.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 65.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 65.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 65.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 65.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 65.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 64.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 64.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 64.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 64.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 64.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 63.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 63.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 63.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 63.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 62.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 62.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 62.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 61.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 61.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 61.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 60.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 60.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 60.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 60.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 60.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 60.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 59.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 59.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 59.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 59.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 59.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 59.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 59.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 59.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 59.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 59.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 58.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 58.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 57.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 57.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 57.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 57.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 57.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 57.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 57.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 57.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 56.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 56.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 56.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 56.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 56.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 55.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 55.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 55.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 54.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 54.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 54.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 54.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 54.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 54.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 53.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 53.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 53.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 52.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 52.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 52.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 51.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 51.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 51.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 51.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 50.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 50.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 49.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 48.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 48.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 48.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 48.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 47.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 47.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 47.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 46.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 46.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 46.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 45.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 44.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 44.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 44.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 43.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 43.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 42.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 42.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 41.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 40.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 37.3
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

129.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 119.8
FF:10164-103B2 76 years, female 119.8
Nucleus accumbens
Scaled Tags Per Million: 127.7
FF:10037-101F1 23-56 years, mixed 127.7
Putamen
Scaled Tags Per Million: 129.5
FF:10176-103C5 60 years, female 129.5
Globus pallidus
Scaled Tags Per Million: 94.7
FF:10175-103C4 60 years, female 120.0
FF:10161-103A8 76 years, female 69.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.3
Pig sample Sample description nTPM
Caudate
nTPM: 70.6
Samples: 4

Max nTPM: 83.6
Min nTPM: 61.6
Sample A Female 61.6
Sample B Female 73.0
Sample C Male 83.6
Sample D Male 64.3
Putamen
nTPM: 71.3
Samples: 4

Max nTPM: 90.4
Min nTPM: 55.3
Sample A Female 61.0
Sample B Female 55.3
Sample C Male 90.4
Sample D Male 78.3
Septum
nTPM: 67.6
Samples: 4

Max nTPM: 71.3
Min nTPM: 63.1
Sample A Female 71.3
Sample B Female 63.1
Sample C Male 69.7
Sample D Male 66.2
Ventral pallidum
nTPM: 65.5
Samples: 4

Max nTPM: 71.2
Min nTPM: 60.0
Sample A Female 60.0
Sample B Female 65.9
Sample C Male 71.2
Sample D Male 64.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

149.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 112.9
Samples: 4

Max nTPM: 127.5
Min nTPM: 102.9
Sample A Male 117.4
Sample B Male 127.5
Sample C Female 102.9
Sample D Female 103.8
Septum
nTPM: 149.9
Samples: 4

Max nTPM: 162.3
Min nTPM: 135.6
Sample A Male 162.3
Sample B Male 135.6
Sample C Female 161.3
Sample D Female 140.4
Ventral forebrain
nTPM: 139.6
Samples: 4

Max nTPM: 158.5
Min nTPM: 129.5
Sample A Male 129.5
Sample B Male 158.5
Sample C Female 133.7
Sample D Female 136.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.9
68191420 Antisense, RP_041129_01_B06, Mouse strain C57BL/6J (56 days, male) 8.9
Pallidum
Expression energy: 10.7
68191420 Antisense, RP_041129_01_B06, Mouse strain C57BL/6J (56 days, male) 10.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org