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CEP164
HPA
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  • CEP164
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CEP164
Synonyms KIAA1052, NPHP15
Gene descriptioni

Full gene name according to HGNC.

Centrosomal protein 164
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q23.3
Chromosome location (bp) 117314557 - 117413266
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000110274 (version 109)
Entrez gene 22897
HGNC HGNC:29182
UniProt Q9UPV0 (UniProt - Evidence at protein level)
neXtProt NX_Q9UPV0
GeneCards CEP164
Antibodypedia CEP164 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Plays a role in microtubule organization and/or maintenance for the formation of primary cilia (PC), a microtubule-based structure that protrudes from the surface of epithelial cells. Plays a critical role in G2/M checkpoint and nuclear divisions. A key player in the DNA damage-activated ATR/ATM signaling cascade since it is required for the proper phosphorylation of H2AX, RPA, CHEK2 and CHEK1. Plays a critical role in chromosome segregation, acting as a mediator required for the maintenance of genomic stability through modulation of MDC1, RPA and CHEK1.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell cycle, Cell division, Cilium biogenesis/degradation, DNA damage, DNA repair, Mitosis
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a centrosomal protein involved in microtubule organization, DNA damage response, and chromosome segregation. The encoded protein is required for assembly of primary cilia and localizes to mature centrioles. Defects in this gene are a cause of nephronophthisis-related ciliopathies. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CEP164-201
ENSP00000278935
ENST00000278935
Q9UPV0
[Direct mapping] Centrosomal protein of 164 kDa
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the urinary system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006281 [DNA repair]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0007049 [cell cycle]
GO:0030030 [cell projection organization]
GO:0051301 [cell division]
GO:0060271 [cilium assembly]
GO:0097539 [ciliary transition fiber]
Show all
1460 aa
164.3 kDa
No 0
CEP164-202
ENSP00000435759
ENST00000525416
E9PIM2
[Direct mapping] Centrosomal protein of 164 kDa
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the urinary system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
122 aa
13.4 kDa
No 0
CEP164-203
ENSP00000436609
ENST00000525734
E9PI05
[Direct mapping] Centrosomal protein of 164 kDa
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the urinary system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
115 aa
13.3 kDa
No 0
CEP164-204
ENSP00000436351
ENST00000527609
E9PLS8
[Direct mapping] Centrosomal protein of 164 kDa
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the urinary system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
121 aa
14.1 kDa
No 0
CEP164-208
ENSP00000436034
ENST00000533153
E9PR73
[Direct mapping] Centrosomal protein of 164 kDa
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the urinary system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
158 aa
17.2 kDa
No 0
CEP164-211
ENSP00000431302
ENST00000533570
E9PLS8
[Direct mapping] Centrosomal protein of 164 kDa
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the urinary system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
121 aa
14.1 kDa
No 0
CEP164-214
ENSP00000491956
ENST00000639320
A0A1W2PQ68
[Direct mapping] Centrosomal protein of 164 kDa
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the urinary system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
727 aa
79 kDa
No 0

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