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RNF141
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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:93.3 nTPM
HPA Brain:93.3 nTPM
GTEx:93.3 nTPM
FANTOM5:237.8 Scaled Tags Per Million
Pig:75.6 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.3
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 80.8
2048 Male, age 55, midline 98.5
1981 Female, age 72, midline 98.3
2816 Male, age 47, midline 73.8
2194 Female, age 79, both hemispheres 68.3
2565 Male, age 75, midline 65.1
Cervical spinal cord, dorsal horn
nTPM: 85.8
2173 Female, age 72, unknown 129.6
2296 Male, age 66, both hemispheres 128.9
2069 Male, age 47, both hemispheres 91.5
1877 Male, age 55, unknown 73.3
2297 Male, age 75, both hemispheres 48.2
2721 Male, age 90, both hemispheres 43.2
Cervical spinal cord, ventral horn
nTPM: 93.3
2098 Female, age 72, unknown 117.4
2480 Male, age 75, both hemispheres 111.9
2809 Male, age 90, both hemispheres 98.4
2295 Male, age 66, both hemispheres 93.8
2068 Male, age 55, unknown 71.9
2820 Female, age 79, both hemispheres 66.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 93.3
Samples: 159

Max nTPM: 157.6
Min nTPM: 34.8
Std nTPM: 25.8
Median nTPM: 94.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 157.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 150.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 143.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 142.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 142.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 137.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 135.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 134.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 133.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 132.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 132.4
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 130.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 130.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 129.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 128.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 126.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 125.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 125.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 124.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 122.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 122.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 121.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 119.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 119.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 119.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 119.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 118.9
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 118.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 117.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 116.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 116.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 115.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 115.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 115.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 115.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 115.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 115.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 114.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 114.4
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 114.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 113.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 113.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 112.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 111.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 111.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 111.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 110.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 110.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 106.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 105.7
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 103.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 102.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 102.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 102.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 102.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 101.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 101.7
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 100.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 100.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 100.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 99.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 99.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 99.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 99.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 99.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 98.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 98.4
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 98.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 98.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 97.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 97.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 97.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 97.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 97.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 96.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 95.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 95.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 95.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 94.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 94.1
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 93.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 93.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 93.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 93.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 92.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 91.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 91.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 91.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 90.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 90.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 90.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 90.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 89.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 89.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 88.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 87.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 87.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 86.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 86.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 86.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 84.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 84.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 83.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 83.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 83.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 82.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 82.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 82.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 82.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 82.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 81.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 81.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 80.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 80.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 79.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 79.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 79.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 78.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 77.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 77.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 76.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 75.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 75.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 74.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 74.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 71.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 70.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 69.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 69.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 68.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 68.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 67.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 67.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 67.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 66.8
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 66.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 65.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 63.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 62.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 62.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 58.1
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 57.5
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 57.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 56.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 55.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 53.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 52.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 52.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 51.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 49.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 49.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 48.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 45.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 42.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 38.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 37.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 36.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 35.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 34.8
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

237.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 237.8
FF:10159-103A6 76 years, female 296.3
FF:10181-103D1 60 years, female 179.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 75.1
Samples: 4

Max nTPM: 92.8
Min nTPM: 56.9
Sample A Female 56.9
Sample B Female 92.8
Sample C Male 86.5
Sample D Male 64.3
Ventral spinal cord
nTPM: 75.6
Samples: 4

Max nTPM: 93.7
Min nTPM: 64.0
Sample A Female 72.1
Sample B Female 72.5
Sample C Male 64.0
Sample D Male 93.7

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