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PTPMT1
HPA
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  • PTPMT1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PTPMT1
Synonyms DUSP23, MOSP, PLIP
Gene descriptioni

Full gene name according to HGNC.

Protein tyrosine phosphatase mitochondrial 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband p11.2
Chromosome location (bp) 47565430 - 47573461
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000110536 (version 109)
Entrez gene 114971
HGNC HGNC:26965
UniProt Q8WUK0 (UniProt - Evidence at protein level)
neXtProt NX_Q8WUK0
GeneCards PTPMT1
Antibodypedia PTPMT1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) (By similarity). PGP is an essential intermediate in the biosynthetic pathway of cardiolipin, a mitochondrial-specific phospholipid regulating the membrane integrity and activities of the organelle (By similarity). Has also been shown to display phosphatase activity toward phosphoprotein substrates, specifically mediates dephosphorylation of mitochondrial proteins, thereby playing an essential role in ATP production (By similarity). Has probably a preference for proteins phosphorylated on Ser and/or Thr residues compared to proteins phosphorylated on Tyr residues (By similarity). Probably involved in regulation of insulin secretion in pancreatic beta cells (By similarity). May prevent intrinsic apoptosis, probably by regulating mitochondrial membrane integrity 1.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase, Protein phosphatase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid biosynthesis, Lipid metabolism, Phospholipid biosynthesis, Phospholipid metabolism
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable phosphatidylglycerophosphatase activity and phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity. Involved in regulation of intrinsic apoptotic signaling pathway. Located in mitochondrion. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PTPMT1-201
ENSP00000325882
ENST00000326656
Q8WUK0
[Direct mapping] Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004439 [phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004722 [protein serine/threonine phosphatase activity]
GO:0004725 [protein tyrosine phosphatase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0006470 [protein dephosphorylation]
GO:0006629 [lipid metabolic process]
GO:0006655 [phosphatidylglycerol biosynthetic process]
GO:0008138 [protein tyrosine/serine/threonine phosphatase activity]
GO:0008654 [phospholipid biosynthetic process]
GO:0008962 [phosphatidylglycerophosphatase activity]
GO:0016020 [membrane]
GO:0016311 [dephosphorylation]
GO:0016787 [hydrolase activity]
GO:0016791 [phosphatase activity]
GO:0017018 [myosin phosphatase activity]
GO:0032049 [cardiolipin biosynthetic process]
GO:2001242 [regulation of intrinsic apoptotic signaling pathway]
Show all
137 aa
15.7 kDa
No 0
PTPMT1-202
ENSP00000325958
ENST00000326674
Q8WUK0
[Direct mapping] Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004439 [phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004722 [protein serine/threonine phosphatase activity]
GO:0004725 [protein tyrosine phosphatase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0006470 [protein dephosphorylation]
GO:0006629 [lipid metabolic process]
GO:0006655 [phosphatidylglycerol biosynthetic process]
GO:0008138 [protein tyrosine/serine/threonine phosphatase activity]
GO:0008654 [phospholipid biosynthetic process]
GO:0008962 [phosphatidylglycerophosphatase activity]
GO:0016020 [membrane]
GO:0016311 [dephosphorylation]
GO:0016787 [hydrolase activity]
GO:0016791 [phosphatase activity]
GO:0017018 [myosin phosphatase activity]
GO:0032049 [cardiolipin biosynthetic process]
GO:2001242 [regulation of intrinsic apoptotic signaling pathway]
Show all
201 aa
22.8 kDa
No 0
PTPMT1-203
ENSP00000410272
ENST00000426530
Q8WUK0
[Direct mapping] Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004439 [phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004722 [protein serine/threonine phosphatase activity]
GO:0004725 [protein tyrosine phosphatase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0006470 [protein dephosphorylation]
GO:0006629 [lipid metabolic process]
GO:0006655 [phosphatidylglycerol biosynthetic process]
GO:0008138 [protein tyrosine/serine/threonine phosphatase activity]
GO:0008654 [phospholipid biosynthetic process]
GO:0008962 [phosphatidylglycerophosphatase activity]
GO:0016020 [membrane]
GO:0016311 [dephosphorylation]
GO:0016787 [hydrolase activity]
GO:0016791 [phosphatase activity]
GO:0017018 [myosin phosphatase activity]
GO:0032049 [cardiolipin biosynthetic process]
GO:2001242 [regulation of intrinsic apoptotic signaling pathway]
Show all
151 aa
16.5 kDa
No 1
PTPMT1-205
ENSP00000436160
ENST00000534775
E9PQM0
[Direct mapping] Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004721 [phosphoprotein phosphatase activity]
Show all
168 aa
18.2 kDa
No 1

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