HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:23.7 nTPM
HPA Brain:83.1 nTPM
GTEx:23.7 nTPM
FANTOM5:96.0 Scaled Tags Per Million
Pig:169.4 nTPM
Mouse:197.1 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 83.1
Sample id Sample description nTPM
Hippocampus
nTPM: 56.8
1898 Male, age 80, left hemisphere 77.1
2148 Female, age 91, left hemisphere 63.0
2621 Female, age 67, right hemisphere 62.9
1855 Male, age 76, left hemisphere 54.7
1911 Female, age 85, right hemisphere 52.1
2529 Female, age 94, left hemisphere 30.9
Dentate gyrus
nTPM: 66.7
1927 Female, age 91, both hemispheres 91.0
2531 Female, age 67, both hemispheres 79.9
2246 Female, age 85, both hemispheres 62.8
2010 Male, age 76, both hemispheres 61.9
2528 Male, age 74, both hemispheres 54.2
2530 Female, age 94, left hemisphere 50.6
Entorhinal gyrus
nTPM: 44.3
2764 Male, age 80, right hemisphere 53.6
2613 Female, age 94, left hemisphere 53.2
1938 Female, age 85, left hemisphere 50.1
1787 Male, age 76, left hemisphere 42.9
2686 Male, age 75, right hemisphere 35.5
2117 Female, age 91, right hemisphere 30.3
Hippocampus, CA1
nTPM: 83.1
2749 Male, age 80, left hemisphere 140.7
1873 Female, age 85, both hemispheres 75.9
2527 Male, age 74, both hemispheres 74.6
2045 Male, age 76, both hemispheres 68.1
2082 Female, age 91, right hemisphere 56.2
Hippocampus, CA2
nTPM: 57.2
1963 Male, age 80, left hemisphere 73.4
1892 Male, age 76, both hemispheres 68.6
2249 Male, age 74, both hemispheres 60.5
1940 Female, age 85, left hemisphere 50.8
2113 Female, age 91, right hemisphere 47.6
2437 Female, age 94, left hemisphere 42.3
Hippocampus, CA3
nTPM: 77.6
2620 Female, age 94, left hemisphere 111.1
2137 Male, age 80, left hemisphere 107.3
1867 Male, age 76, both hemispheres 66.2
2436 Male, age 74, both hemispheres 64.9
2861 Female, age 67, both hemispheres 64.2
1891 Female, age 85, both hemispheres 51.7
Parahippocampal cortex
nTPM: 50.8
1850 Male, age 80, both hemispheres 61.8
2245 Female, age 91, both hemispheres 60.5
2250 Female, age 67, right hemisphere 59.2
2693 Female, age 94, both hemispheres 55.3
1990 Female, age 91, right hemisphere 53.0
2018 Male, age 76, both hemispheres 47.9
2532 Female, age 72, left hemisphere 47.5
1933 Female, age 85, both hemispheres 46.9
2622 Female, age 67, right hemisphere 41.8
2692 Male, age 74, both hemispheres 34.4
Perirhinal gyrus
nTPM: 64.1
1847 Female, age 91, left hemisphere 70.9
2521 Female, age 94, right hemisphere 68.1
1794 Male, age 80, right hemisphere 66.6
1841 Female, age 85, right hemisphere 63.7
2848 Male, age 76, right hemisphere 51.0
Subiculum
nTPM: 44.9
1901 Male, age 80, both hemispheres 60.2
1977 Female, age 85, both hemispheres 53.9
2729 Female, age 91, right hemisphere 41.7
2438 Female, age 94, left hemisphere 41.3
2619 Male, age 74, both hemispheres 39.4
2042 Male, age 76, both hemispheres 32.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 23.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.7
Samples: 197

Max nTPM: 67.6
Min nTPM: 1.4
Std nTPM: 16.1
Median nTPM: 20.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 67.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 63.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 62.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 62.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 61.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 61.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 58.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 57.2
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 55.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 54.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 96.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 96.0
FF:10169-103B7 60 years, female 136.0
FF:10153-102I9 76 years, female 56.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 169.4
Pig sample Sample description nTPM
Subiculum
nTPM: 79.3
Samples: 4

Max nTPM: 103.2
Min nTPM: 70.5
Sample A Female 103.2
Sample B Female 71.9
Sample C Male 71.5
Sample D Male 70.5
Dorsal hippocampus
nTPM: 169.4
Samples: 4

Max nTPM: 206.1
Min nTPM: 114.9
Sample A Female 186.7
Sample B Female 206.1
Sample C Male 114.9
Sample D Male 169.7
Entorhinal cortex
nTPM: 106.0
Samples: 4

Max nTPM: 132.0
Min nTPM: 87.1
Sample A Female 109.9
Sample B Female 132.0
Sample C Male 94.9
Sample D Male 87.1
Ventral hippocampus
nTPM: 145.4
Samples: 4

Max nTPM: 226.2
Min nTPM: 116.2
Sample A Female 116.2
Sample B Female 119.1
Sample C Male 120.1
Sample D Male 226.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 197.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 150.8
Samples: 4

Max nTPM: 167.8
Min nTPM: 134.0
Sample A Male 151.7
Sample B Male 149.5
Sample C Female 167.8
Sample D Female 134.0
Hippocampal formation
nTPM: 197.1
Samples: 4

Max nTPM: 214.0
Min nTPM: 174.0
Sample A Male 197.0
Sample B Male 214.0
Sample C Female 203.5
Sample D Female 174.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org