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NDUFS8
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:172.5 nTPM
FANTOM5:139.3 Scaled Tags Per Million
Pig:98.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018524Antibody HPA067429
Glial cells LowLow
Neuronal cells LowMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 172.5
Samples: 246

Max nTPM: 354.5
Min nTPM: 65.6
Std nTPM: 49.7
Median nTPM: 166.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 354.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 341.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 323.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 314.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 312.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 310.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 306.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 302.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 279.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 278.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 275.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 273.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 269.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 266.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 265.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 261.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 257.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 254.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 252.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 247.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 247.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 245.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 244.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 242.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 239.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 238.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 238.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 235.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 230.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 229.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 227.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 225.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 225.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 219.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 218.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 218.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 216.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 216.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 215.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 214.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 213.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 212.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 211.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 211.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 210.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 209.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 208.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 207.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 207.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 202.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 200.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 199.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 199.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 198.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 198.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 198.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 197.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 197.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 197.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 195.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 195.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 194.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 193.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 193.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 193.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 193.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 192.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 192.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 192.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 191.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 191.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 191.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 190.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 189.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 189.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 187.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 187.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 186.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 186.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 186.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 185.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 184.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 184.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 184.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 183.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 183.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 182.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 182.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 182.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 181.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 180.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 179.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 179.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 177.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 177.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 176.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 176.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 176.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 175.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 175.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 175.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 175.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 175.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 175.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 174.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 173.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 173.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 173.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 173.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 173.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 172.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 171.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 170.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 170.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 170.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 170.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 170.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 169.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 169.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 169.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 168.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 167.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 166.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 166.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 166.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 165.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 165.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 165.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 164.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 164.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 163.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 163.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 163.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 162.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 161.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 161.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 161.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 161.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 160.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 160.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 159.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 159.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 159.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 158.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 158.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 156.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 155.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 155.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 155.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 154.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 154.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 154.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 153.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 153.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 153.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 152.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 152.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 151.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 151.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 151.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 151.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 150.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 149.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 149.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 148.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 148.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 147.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 147.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 147.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 147.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 147.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 146.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 146.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 146.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 145.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 145.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 143.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 142.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 142.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 141.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 141.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 141.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 140.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 139.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 139.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 138.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 138.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 138.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 137.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 136.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 136.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 135.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 135.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 135.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 134.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 133.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 133.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 133.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 133.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 132.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 130.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 129.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 127.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 126.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 126.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 125.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 124.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 124.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 123.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 123.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 122.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 122.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 121.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 121.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 121.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 120.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 118.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 116.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 116.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 116.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 114.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 113.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 113.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 112.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 112.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 111.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 109.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 108.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 107.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 106.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 105.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 105.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 104.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 101.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 100.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 99.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 97.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 96.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 95.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 94.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 93.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 93.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 90.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 90.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 88.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 65.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

139.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 139.3
FF:10164-103B2 76 years, female 139.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.5
Pig sample Sample description nTPM
Caudate
nTPM: 98.5
Samples: 4

Max nTPM: 113.1
Min nTPM: 84.0
Sample A Female 84.0
Sample B Female 110.5
Sample C Male 113.1
Sample D Male 86.3

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