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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:297.0 nTPM
HPA Brain:377.7 nTPM
GTEx:297.0 nTPM
FANTOM5:444.4 Scaled Tags Per Million
Pig:88.0 nTPM
Mouse:125.5 nTPM
Allen mouse:20.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031014
Glial cells Not detected
Neuronal cells High


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

377.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 320.4
1857 Female, age 85, left hemisphere 483.4
2290 Female, age 72, unknown 415.2
1854 Male, age 80, left hemisphere 404.6
2288 Male, age 75, left hemisphere 324.1
2846 Female, age 79, unknown 277.1
1781 Male, age 74, unknown 253.9
2289 Male, age 61, right hemisphere 251.6
2481 Female, age 94, left hemisphere 153.2
Globus pallidus, externus
nTPM: 36.7
2646 Male, age 61, right hemisphere 62.9
2395 Male, age 75, both hemispheres 45.1
2567 Female, age 72, unknown 31.0
2772 Female, age 79, unknown 28.0
1996 Male, age 80, right hemisphere 16.4
Globus pallidus, internus
nTPM: 27.7
2483 Female, age 94, right hemisphere 92.5
1818 Male, age 74, unknown 30.1
2566 Female, age 72, unknown 26.1
2037 Male, age 80, right hemisphere 18.1
2111 Female, age 85, right hemisphere 11.9
2287 Male, age 75, right hemisphere 7.7
2778 Female, age 91, both hemispheres 7.5
Nucleus accumbens
nTPM: 344.4
1856 Female, age 91, right hemisphere 648.5
2824 Male, age 61, right hemisphere 422.8
1783 Male, age 74, unknown 418.9
1806 Female, age 85, left hemisphere 415.9
2286 Male, age 75, left hemisphere 330.0
2698 Female, age 72, unknown 259.9
2391 Female, age 94, left hemisphere 142.3
2732 Male, age 80, right hemisphere 116.8
Nucleus basalis of Meynert
nTPM: 224.1
2393 Male, age 80, right hemisphere 299.3
2484 Female, age 94, left hemisphere 289.4
2821 Male, age 75, both hemispheres 212.2
2569 Male, age 61, both hemispheres 95.5
Nucleus of the diagonal band
nTPM: 104.2
1979 Male, age 74, unknown 125.9
1812 Female, age 91, both hemispheres 112.0
2029 Male, age 61, right hemisphere 98.9
2195 Female, age 85, both hemispheres 95.2
2775 Male, age 80, right hemisphere 88.9
Putamen
nTPM: 377.7
1937 Female, age 91, right hemisphere 507.9
1838 Male, age 80, right hemisphere 487.8
2489 Female, age 72, unknown 418.3
1829 Male, age 74, unknown 376.9
2647 Male, age 75, left hemisphere 334.6
2466 Female, age 79, unknown 300.5
2482 Female, age 94, left hemisphere 218.2
Septal nuclei
nTPM: 93.0
1960 Male, age 74, unknown 110.3
2629 Female, age 94, right hemisphere 102.0
2009 Female, age 91, both hemispheres 94.7
2199 Male, age 80, right hemisphere 88.2
2031 Female, age 72, unknown 87.1
2059 Female, age 85, both hemispheres 84.8
2394 Male, age 61, left hemisphere 83.8
Stria terminalis, bed nucleus
nTPM: 121.4
2486 Female, age 94, both hemispheres 172.1
1974 Female, age 91, both hemispheres 104.9
2201 Male, age 74, unknown 87.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

297.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 243.2
Samples: 246

Max nTPM: 584.4
Min nTPM: 10.1
Std nTPM: 136.5
Median nTPM: 230.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 584.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 582.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 582.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 509.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 505.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 493.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 491.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 485.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 479.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 478.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 476.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 466.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 461.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 454.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 453.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 450.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 448.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 448.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 447.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 442.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 442.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 441.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 441.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 439.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 435.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 431.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 431.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 431.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 430.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 428.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 427.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 426.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 426.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 410.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 408.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 407.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 402.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 402.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 397.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 396.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 396.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 393.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 393.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 390.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 390.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 390.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 386.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 385.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 384.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 383.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 378.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 372.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 370.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 365.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 363.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 355.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 355.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 355.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 354.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 353.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 352.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 351.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 351.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 345.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 345.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 344.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 341.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 341.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 338.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 337.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 336.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 335.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 334.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 333.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 326.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 325.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 323.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 320.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 316.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 315.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 314.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 313.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 312.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 311.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 306.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 305.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 304.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 303.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 300.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 299.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 299.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 298.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 298.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 295.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 294.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 285.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 284.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 284.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 283.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 282.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 280.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 279.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 278.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 273.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 272.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 272.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 270.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 267.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 265.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 249.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 248.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 246.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 244.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 244.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 243.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 243.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 236.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 236.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 234.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 234.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 233.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 232.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 230.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 230.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 222.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 221.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 220.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 219.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 219.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 219.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 218.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 218.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 216.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 216.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 216.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 213.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 213.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 211.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 206.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 205.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 202.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 201.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 201.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 198.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 197.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 195.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 193.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 192.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 189.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 188.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 184.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 183.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 180.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 177.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 173.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 169.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 169.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 168.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 168.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 167.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 165.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 164.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 164.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 163.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 158.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 158.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 157.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 155.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 149.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 149.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 148.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 146.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 144.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 143.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 142.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 141.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 135.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 129.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 126.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 126.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 126.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 123.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 122.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 121.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 120.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 120.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 116.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 115.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 115.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 113.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 113.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 111.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 110.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 109.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 109.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 108.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 108.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 108.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 106.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 101.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 99.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 97.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 93.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 93.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 91.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 90.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 87.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 87.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 86.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 85.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 83.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 83.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 82.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 81.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 80.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 80.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 77.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 75.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 75.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 74.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 74.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 73.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 72.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 66.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 62.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 61.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 60.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 59.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 57.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 50.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 50.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 50.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 46.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 45.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 44.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 40.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 37.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 37.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 36.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 36.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 28.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 26.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 17.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 10.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 297.0
Samples: 246

Max nTPM: 646.8
Min nTPM: 5.7
Std nTPM: 151.1
Median nTPM: 321.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 646.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 600.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 590.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 572.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 566.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 557.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 556.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 544.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 532.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 531.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 529.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 527.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 519.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 518.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 513.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 509.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 508.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 504.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 503.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 503.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 494.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 493.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 488.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 488.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 482.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 478.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 473.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 470.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 465.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 465.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 463.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 462.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 455.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 455.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 453.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 453.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 453.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 448.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 447.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 447.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 445.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 444.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 444.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 440.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 439.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 435.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 434.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 434.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 430.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 430.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 429.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 426.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 424.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 423.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 422.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 421.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 421.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 420.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 420.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 418.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 418.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 416.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 416.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 415.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 415.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 415.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 413.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 410.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 409.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 406.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 406.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 404.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 403.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 401.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 400.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 396.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 396.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 395.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 392.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 390.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 390.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 388.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 388.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 385.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 383.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 383.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 381.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 381.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 379.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 376.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 374.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 373.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 369.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 364.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 364.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 360.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 359.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 358.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 356.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 355.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 355.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 354.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 353.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 350.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 346.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 345.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 344.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 343.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 342.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 342.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 342.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 341.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 340.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 336.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 336.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 334.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 332.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 332.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 331.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 330.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 329.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 323.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 322.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 321.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 320.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 320.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 320.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 318.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 314.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 314.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 312.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 306.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 305.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 298.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 298.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 296.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 294.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 293.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 292.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 289.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 288.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 287.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 286.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 286.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 286.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 280.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 267.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 267.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 266.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 261.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 261.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 260.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 260.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 258.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 254.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 247.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 240.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 237.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 236.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 236.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 235.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 232.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 227.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 225.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 223.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 222.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 214.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 214.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 211.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 210.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 203.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 203.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 202.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 200.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 189.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 174.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 173.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 171.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 170.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 169.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 169.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 167.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 167.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 166.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 165.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 162.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 161.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 160.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 155.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 155.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 155.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 150.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 147.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 145.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 138.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 136.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 136.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 135.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 134.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 132.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 132.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 129.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 127.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 124.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 120.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 114.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 108.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 107.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 103.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 103.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 98.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 96.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 95.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 95.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 95.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 94.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 92.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 91.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 86.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 83.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 82.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 81.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 78.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 77.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 76.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 68.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 63.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 61.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 59.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 55.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 52.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 49.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 46.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 45.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 42.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 33.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 31.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 28.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 24.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 21.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 19.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 17.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 15.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 11.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 6.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 5.7
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Brain - Putamen (basal ganglia)
Average nTPM: 239.4
Samples: 205

Max nTPM: 659.1
Min nTPM: 13.7
Std nTPM: 146.5
Median nTPM: 223.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 659.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 656.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 584.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 581.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 547.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 539.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 516.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 496.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 495.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 493.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 486.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 481.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 476.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 472.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 465.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 453.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 451.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 440.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 440.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 435.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 434.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 419.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 419.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 416.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 414.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 412.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 412.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 412.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 411.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 407.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 405.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 402.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 401.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 392.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 392.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 392.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 391.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 390.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 386.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 381.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 374.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 372.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 364.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 364.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 361.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 359.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 357.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 351.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 350.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 348.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 348.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 347.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 344.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 342.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 341.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 339.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 338.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 337.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 337.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 334.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 334.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 333.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 332.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 329.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 326.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 325.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 324.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 323.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 322.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 318.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 311.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 311.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 308.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 305.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 305.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 304.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 302.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 302.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 284.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 284.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 281.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 279.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 276.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 275.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 274.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 274.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 267.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 251.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 251.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 250.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 249.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 249.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 246.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 245.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 240.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 240.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 238.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 236.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 235.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 229.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 226.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 226.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 223.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 222.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 222.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 220.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 219.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 216.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 216.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 216.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 208.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 208.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 207.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 203.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 199.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 199.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 197.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 193.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 187.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 183.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 182.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 180.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 179.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 177.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 175.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 175.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 169.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 169.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 169.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 161.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 159.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 150.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 148.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 143.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 143.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 142.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 141.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 138.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 136.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 135.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 134.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 132.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 132.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 132.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 129.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 124.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 124.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 124.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 124.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 118.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 118.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 117.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 116.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 113.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 109.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 108.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 107.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 99.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 96.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 96.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 93.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 92.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 86.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 84.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 82.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 81.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 80.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 80.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 80.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 80.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 80.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 77.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 76.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 75.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 71.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 71.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 71.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 69.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 68.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 67.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 66.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 65.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 65.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 63.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 62.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 62.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 61.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 50.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 49.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 49.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 49.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 45.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 43.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 42.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 39.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 39.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 36.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 36.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 31.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 26.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 25.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 24.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 23.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 14.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 13.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

444.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 343.3
FF:10164-103B2 76 years, female 343.3
Nucleus accumbens
Scaled Tags Per Million: 210.0
FF:10037-101F1 23-56 years, mixed 210.0
Putamen
Scaled Tags Per Million: 444.4
FF:10176-103C5 60 years, female 444.4
Globus pallidus
Scaled Tags Per Million: 104.1
FF:10175-103C4 60 years, female 160.0
FF:10161-103A8 76 years, female 48.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.0
Pig sample Sample description nTPM
Caudate
nTPM: 80.2
Samples: 4

Max nTPM: 96.1
Min nTPM: 52.5
Sample A Female 52.5
Sample B Female 86.7
Sample C Male 96.1
Sample D Male 85.5
Putamen
nTPM: 88.0
Samples: 4

Max nTPM: 121.1
Min nTPM: 30.0
Sample A Female 30.0
Sample B Female 93.9
Sample C Male 121.1
Sample D Male 107.1
Septum
nTPM: 51.0
Samples: 4

Max nTPM: 69.8
Min nTPM: 32.1
Sample A Female 47.2
Sample B Female 54.8
Sample C Male 32.1
Sample D Male 69.8
Ventral pallidum
nTPM: 51.4
Samples: 4

Max nTPM: 64.0
Min nTPM: 32.0
Sample A Female 64.0
Sample B Female 54.3
Sample C Male 32.0
Sample D Male 55.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 121.8
Samples: 4

Max nTPM: 160.7
Min nTPM: 92.6
Sample A Male 135.7
Sample B Male 160.7
Sample C Female 92.6
Sample D Female 98.0
Septum
nTPM: 125.5
Samples: 4

Max nTPM: 154.0
Min nTPM: 96.0
Sample A Male 96.0
Sample B Male 154.0
Sample C Female 112.0
Sample D Female 140.0
Ventral forebrain
nTPM: 76.5
Samples: 4

Max nTPM: 88.8
Min nTPM: 66.7
Sample A Male 88.8
Sample B Male 80.9
Sample C Female 69.7
Sample D Female 66.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 20.8
71378389 Antisense, RP_050510_03_F03, Mouse strain C57BL/6J (56 days, male) 20.8
74743293 Antisense, RP_060220_04_E11, Mouse strain C57BL/6J (56 days, male) 20.8
Pallidum
Expression energy: 10.7
71378389 Antisense, RP_050510_03_F03, Mouse strain C57BL/6J (56 days, male) 12.9
74743293 Antisense, RP_060220_04_E11, Mouse strain C57BL/6J (56 days, male) 8.5

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