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CORO1C
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SUBCELL

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  • STRUCT & INT

  • CORO1C
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CORO1C
Synonyms coronin-3, HCRNN4
Gene descriptioni

Full gene name according to HGNC.

Coronin 1C
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q24.11
Chromosome location (bp) 108645109 - 108731526
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

12
Ensembl ENSG00000110880 (version 109)
Entrez gene 23603
HGNC HGNC:2254
UniProt Q9ULV4 (UniProt - Evidence at protein level)
neXtProt NX_Q9ULV4
GeneCards CORO1C
Antibodypedia CORO1C antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Plays a role in directed cell migration by regulating the activation and subcellular location of RAC1 1, 2. Increases the presence of activated RAC1 at the leading edge of migrating cells 3, 4. Required for normal organization of the cytoskeleton, including the actin cytoskeleton, microtubules and the vimentin intermediate filaments (By similarity). Plays a role in endoplasmic reticulum-associated endosome fission: localizes to endosome membrane tubules and promotes recruitment of TMCC1, leading to recruitment of the endoplasmic reticulum to endosome tubules for fission 5. Endosome membrane fission of early and late endosomes is essential to separate regions destined for lysosomal degradation from carriers to be recycled to the plasma membrane 6. Required for normal cell proliferation, cell migration, and normal formation of lamellipodia (By similarity). Required for normal distribution of mitochondria within cells (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Actin-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 amino acids typically bracketed by gly-his and trp-asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein complexes. Members of this family are involved in a variety of cellular processes, including cell cycle progression, signal transduction, apoptosis, and gene regulation. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Feb 2013]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CORO1C-201
ENSP00000261401
ENST00000261401
Q9ULV4
[Direct mapping] Coronin-1C
Show all
A0A024RBI5
[Target identity:100%; Query identity:100%] Coronin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001755 [neural crest cell migration]
GO:0001932 [regulation of protein phosphorylation]
GO:0001933 [negative regulation of protein phosphorylation]
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0005938 [cell cortex]
GO:0006909 [phagocytosis]
GO:0007015 [actin filament organization]
GO:0007165 [signal transduction]
GO:0010008 [endosome membrane]
GO:0010632 [regulation of epithelial cell migration]
GO:0010633 [negative regulation of epithelial cell migration]
GO:0010762 [regulation of fibroblast migration]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0016197 [endosomal transport]
GO:0016328 [lateral plasma membrane]
GO:0016477 [cell migration]
GO:0016600 [flotillin complex]
GO:0021591 [ventricular system development]
GO:0022038 [corpus callosum development]
GO:0030017 [sarcomere]
GO:0030027 [lamellipodium]
GO:0030036 [actin cytoskeleton organization]
GO:0031267 [small GTPase binding]
GO:0031982 [vesicle]
GO:0032587 [ruffle membrane]
GO:0042383 [sarcolemma]
GO:0042995 [cell projection]
GO:0044387 [negative regulation of protein kinase activity by regulation of protein phosphorylation]
GO:0045184 [establishment of protein localization]
GO:0045202 [synapse]
GO:0051015 [actin filament binding]
GO:0051893 [regulation of focal adhesion assembly]
GO:0051895 [negative regulation of focal adhesion assembly]
GO:0090148 [membrane fission]
GO:0090630 [activation of GTPase activity]
GO:0097750 [endosome membrane tubulation]
GO:0140285 [endosome fission]
GO:1900024 [regulation of substrate adhesion-dependent cell spreading]
GO:1900025 [negative regulation of substrate adhesion-dependent cell spreading]
GO:1900027 [regulation of ruffle assembly]
GO:2000394 [positive regulation of lamellipodium morphogenesis]
Show all
474 aa
53.2 kDa
No 0
CORO1C-202
ENSP00000394496
ENST00000420959
Q9ULV4
[Direct mapping] Coronin-1C
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001755 [neural crest cell migration]
GO:0001932 [regulation of protein phosphorylation]
GO:0001933 [negative regulation of protein phosphorylation]
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0005938 [cell cortex]
GO:0006909 [phagocytosis]
GO:0007015 [actin filament organization]
GO:0007165 [signal transduction]
GO:0010008 [endosome membrane]
GO:0010632 [regulation of epithelial cell migration]
GO:0010633 [negative regulation of epithelial cell migration]
GO:0010762 [regulation of fibroblast migration]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0016197 [endosomal transport]
GO:0016328 [lateral plasma membrane]
GO:0016477 [cell migration]
GO:0016600 [flotillin complex]
GO:0030017 [sarcomere]
GO:0030027 [lamellipodium]
GO:0030036 [actin cytoskeleton organization]
GO:0031982 [vesicle]
GO:0032587 [ruffle membrane]
GO:0042383 [sarcolemma]
GO:0042995 [cell projection]
GO:0044387 [negative regulation of protein kinase activity by regulation of protein phosphorylation]
GO:0045184 [establishment of protein localization]
GO:0045202 [synapse]
GO:0051015 [actin filament binding]
GO:0051893 [regulation of focal adhesion assembly]
GO:0051895 [negative regulation of focal adhesion assembly]
GO:0090148 [membrane fission]
GO:0090630 [activation of GTPase activity]
GO:0097750 [endosome membrane tubulation]
GO:0140285 [endosome fission]
GO:1900024 [regulation of substrate adhesion-dependent cell spreading]
GO:1900025 [negative regulation of substrate adhesion-dependent cell spreading]
GO:2000394 [positive regulation of lamellipodium morphogenesis]
Show all
527 aa
58.9 kDa
No 0
CORO1C-203
ENSP00000415554
ENST00000421578
B4E3S0
[Direct mapping] Coronin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0015629 [actin cytoskeleton]
GO:0030036 [actin cytoskeleton organization]
GO:0051015 [actin filament binding]
Show all
369 aa
41.6 kDa
No 0
CORO1C-204
ENSP00000438341
ENST00000541050
Q9ULV4
[Direct mapping] Coronin-1C
Show all
A0A024RBI5
[Target identity:100%; Query identity:100%] Coronin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001755 [neural crest cell migration]
GO:0001932 [regulation of protein phosphorylation]
GO:0001933 [negative regulation of protein phosphorylation]
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0005938 [cell cortex]
GO:0006909 [phagocytosis]
GO:0007015 [actin filament organization]
GO:0007165 [signal transduction]
GO:0010008 [endosome membrane]
GO:0010632 [regulation of epithelial cell migration]
GO:0010633 [negative regulation of epithelial cell migration]
GO:0010762 [regulation of fibroblast migration]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0016197 [endosomal transport]
GO:0016328 [lateral plasma membrane]
GO:0016477 [cell migration]
GO:0016600 [flotillin complex]
GO:0030017 [sarcomere]
GO:0030027 [lamellipodium]
GO:0030036 [actin cytoskeleton organization]
GO:0031982 [vesicle]
GO:0032587 [ruffle membrane]
GO:0042383 [sarcolemma]
GO:0042995 [cell projection]
GO:0044387 [negative regulation of protein kinase activity by regulation of protein phosphorylation]
GO:0045184 [establishment of protein localization]
GO:0045202 [synapse]
GO:0051015 [actin filament binding]
GO:0051893 [regulation of focal adhesion assembly]
GO:0051895 [negative regulation of focal adhesion assembly]
GO:0090148 [membrane fission]
GO:0090630 [activation of GTPase activity]
GO:0097750 [endosome membrane tubulation]
GO:0140285 [endosome fission]
GO:1900024 [regulation of substrate adhesion-dependent cell spreading]
GO:1900025 [negative regulation of substrate adhesion-dependent cell spreading]
GO:2000394 [positive regulation of lamellipodium morphogenesis]
Show all
474 aa
53.2 kDa
No 0
CORO1C-205
ENSP00000448195
ENST00000546571
F8VSA4
[Direct mapping] Coronin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0015629 [actin cytoskeleton]
GO:0030036 [actin cytoskeleton organization]
GO:0051015 [actin filament binding]
Show all
162 aa
17.8 kDa
No 0
CORO1C-206
ENSP00000447337
ENST00000546705
H0YHL7
[Direct mapping] Coronin-1C
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0015629 [actin cytoskeleton]
GO:0030036 [actin cytoskeleton organization]
GO:0051015 [actin filament binding]
Show all
165 aa
18.7 kDa
No 0
CORO1C-208
ENSP00000449330
ENST00000547294
F8VVB7
[Direct mapping] Coronin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0015629 [actin cytoskeleton]
GO:0030036 [actin cytoskeleton organization]
GO:0051015 [actin filament binding]
Show all
181 aa
20 kDa
No 0
CORO1C-212
ENSP00000447534
ENST00000549772
Q9ULV4
[Direct mapping] Coronin-1C
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001755 [neural crest cell migration]
GO:0001932 [regulation of protein phosphorylation]
GO:0001933 [negative regulation of protein phosphorylation]
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0005938 [cell cortex]
GO:0006909 [phagocytosis]
GO:0007015 [actin filament organization]
GO:0007165 [signal transduction]
GO:0010008 [endosome membrane]
GO:0010632 [regulation of epithelial cell migration]
GO:0010633 [negative regulation of epithelial cell migration]
GO:0010762 [regulation of fibroblast migration]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0016197 [endosomal transport]
GO:0016328 [lateral plasma membrane]
GO:0016477 [cell migration]
GO:0016600 [flotillin complex]
GO:0030017 [sarcomere]
GO:0030027 [lamellipodium]
GO:0030036 [actin cytoskeleton organization]
GO:0031982 [vesicle]
GO:0032587 [ruffle membrane]
GO:0042383 [sarcolemma]
GO:0042995 [cell projection]
GO:0044387 [negative regulation of protein kinase activity by regulation of protein phosphorylation]
GO:0045184 [establishment of protein localization]
GO:0045202 [synapse]
GO:0051015 [actin filament binding]
GO:0051893 [regulation of focal adhesion assembly]
GO:0051895 [negative regulation of focal adhesion assembly]
GO:0090148 [membrane fission]
GO:0090630 [activation of GTPase activity]
GO:0097750 [endosome membrane tubulation]
GO:0140285 [endosome fission]
GO:1900024 [regulation of substrate adhesion-dependent cell spreading]
GO:1900025 [negative regulation of substrate adhesion-dependent cell spreading]
GO:2000394 [positive regulation of lamellipodium morphogenesis]
Show all
480 aa
54.1 kDa
No 0
CORO1C-213
ENSP00000447989
ENST00000550032
F8VTT6
[Direct mapping] Coronin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0015629 [actin cytoskeleton]
GO:0030036 [actin cytoskeleton organization]
GO:0051015 [actin filament binding]
Show all
169 aa
18.5 kDa
No 0
CORO1C-215
ENSP00000447049
ENST00000551044
F8W1H8
[Direct mapping] Coronin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0015629 [actin cytoskeleton]
GO:0030036 [actin cytoskeleton organization]
GO:0051015 [actin filament binding]
Show all
151 aa
16.6 kDa
No 0
CORO1C-217
ENSP00000448527
ENST00000551550
F8VRE9
[Direct mapping] Coronin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0015629 [actin cytoskeleton]
GO:0030036 [actin cytoskeleton organization]
GO:0051015 [actin filament binding]
Show all
163 aa
17.9 kDa
No 0
CORO1C-219
ENSP00000449658
ENST00000552871
F8VV53
[Direct mapping] Coronin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0015629 [actin cytoskeleton]
GO:0030036 [actin cytoskeleton organization]
GO:0051015 [actin filament binding]
Show all
125 aa
13.8 kDa
No 0

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