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PTGES3
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:133.4 nTPM
FANTOM5:372.6 Scaled Tags Per Million
Pig:178.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038672Antibody HPA038673Antibody CAB034319
Glial cells LowNot detectedLow
Neuronal cells MediumLowLow






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 133.4
Samples: 246

Max nTPM: 702.7
Min nTPM: 74.9
Std nTPM: 56.6
Median nTPM: 120.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 702.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 448.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 324.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 306.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 287.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 283.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 262.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 260.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 244.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 243.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 228.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 214.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 208.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 208.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 201.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 195.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 190.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 190.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 188.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 186.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 182.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 178.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 177.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 176.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 176.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 175.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 173.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 173.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 172.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 171.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 171.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 170.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 167.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 164.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 161.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 160.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 160.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 160.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 160.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 160.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 159.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 159.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 159.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 157.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 156.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 155.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 154.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 149.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 149.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 148.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 146.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 145.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 144.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 144.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 144.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 143.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 143.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 142.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 142.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 142.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 142.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 141.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 141.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 140.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 140.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 140.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 138.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 138.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 138.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 138.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 137.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 137.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 137.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 137.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 135.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 134.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 134.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 133.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 133.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 132.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 132.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 132.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 131.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 131.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 131.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 130.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 130.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 130.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 130.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 130.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 130.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 130.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 129.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 129.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 128.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 128.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 128.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 128.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 128.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 127.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 126.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 125.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 125.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 125.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 124.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 124.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 124.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 123.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 123.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 123.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 122.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 122.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 122.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 121.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 121.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 121.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 121.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 120.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 120.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 120.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 120.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 120.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 120.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 120.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 118.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 118.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 118.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 117.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 117.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 117.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 117.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 117.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 117.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 116.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 116.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 116.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 115.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 115.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 114.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 114.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 114.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 114.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 114.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 114.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 113.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 113.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 112.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 112.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 112.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 111.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 111.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 111.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 111.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 111.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 111.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 111.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 111.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 110.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 110.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 110.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 110.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 110.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 109.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 109.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 109.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 108.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 108.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 108.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 108.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 107.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 107.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 107.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 107.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 107.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 106.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 106.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 106.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 106.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 106.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 106.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 106.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 106.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 105.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 105.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 105.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 105.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 104.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 104.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 104.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 104.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 104.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 104.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 104.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 103.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 103.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 103.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 103.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 102.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 102.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 102.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 101.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 101.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 100.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 100.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 100.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 100.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 100.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 100.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 100.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 100.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 99.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 99.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 98.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 98.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 98.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 98.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 97.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 96.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 96.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 96.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 95.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 95.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 95.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 95.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 95.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 95.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 94.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 94.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 93.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 93.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 93.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 93.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 93.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 93.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 93.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 93.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 92.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 92.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 91.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 90.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 88.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 83.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 82.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 80.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 74.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

372.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 372.6
FF:10164-103B2 76 years, female 372.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.8
Pig sample Sample description nTPM
Caudate
nTPM: 178.8
Samples: 4

Max nTPM: 206.9
Min nTPM: 161.6
Sample A Female 183.3
Sample B Female 161.6
Sample C Male 206.9
Sample D Male 163.5

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