HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:149.1 nTPM
HPA Brain:140.7 nTPM
GTEx:149.1 nTPM
FANTOM5:425.4 Scaled Tags Per Million
Pig:228.4 nTPM
Mouse:97.1 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038672Antibody HPA038673Antibody CAB034319
Glial cells MediumNot detectedNot detected
Neuronal cells LowLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 140.7
Sample id Sample description nTPM
Hippocampus
nTPM: 139.8
2529 Female, age 94, left hemisphere 184.7
1898 Male, age 80, left hemisphere 160.6
1855 Male, age 76, left hemisphere 130.1
1911 Female, age 85, right hemisphere 127.3
2621 Female, age 67, right hemisphere 124.2
2148 Female, age 91, left hemisphere 112.2
Dentate gyrus
nTPM: 133.7
2010 Male, age 76, both hemispheres 174.6
2530 Female, age 94, left hemisphere 160.6
2246 Female, age 85, both hemispheres 130.6
1927 Female, age 91, both hemispheres 118.1
2531 Female, age 67, both hemispheres 112.0
2528 Male, age 74, both hemispheres 106.3
Entorhinal gyrus
nTPM: 119.4
2117 Female, age 91, right hemisphere 142.7
1938 Female, age 85, left hemisphere 135.2
2764 Male, age 80, right hemisphere 123.9
1787 Male, age 76, left hemisphere 123.8
2686 Male, age 75, right hemisphere 109.4
2613 Female, age 94, left hemisphere 81.4
Hippocampus, CA1
nTPM: 140.7
2749 Male, age 80, left hemisphere 163.6
2527 Male, age 74, both hemispheres 146.4
1873 Female, age 85, both hemispheres 144.9
2045 Male, age 76, both hemispheres 138.1
2082 Female, age 91, right hemisphere 110.6
Hippocampus, CA2
nTPM: 139.0
1892 Male, age 76, both hemispheres 172.8
1963 Male, age 80, left hemisphere 141.6
2249 Male, age 74, both hemispheres 140.1
1940 Female, age 85, left hemisphere 134.0
2437 Female, age 94, left hemisphere 132.1
2113 Female, age 91, right hemisphere 113.6
Hippocampus, CA3
nTPM: 128.8
1867 Male, age 76, both hemispheres 155.8
1891 Female, age 85, both hemispheres 141.7
2137 Male, age 80, left hemisphere 137.3
2620 Female, age 94, left hemisphere 123.4
2436 Male, age 74, both hemispheres 116.1
2861 Female, age 67, both hemispheres 98.5
Parahippocampal cortex
nTPM: 121.6
1850 Male, age 80, both hemispheres 141.5
2245 Female, age 91, both hemispheres 138.6
2018 Male, age 76, both hemispheres 137.7
2532 Female, age 72, left hemisphere 131.1
1933 Female, age 85, both hemispheres 127.8
2250 Female, age 67, right hemisphere 126.2
1990 Female, age 91, right hemisphere 126.0
2692 Male, age 74, both hemispheres 116.0
2622 Female, age 67, right hemisphere 85.6
2693 Female, age 94, both hemispheres 85.2
Perirhinal gyrus
nTPM: 128.2
1841 Female, age 85, right hemisphere 147.2
1847 Female, age 91, left hemisphere 128.2
1794 Male, age 80, right hemisphere 126.8
2848 Male, age 76, right hemisphere 126.8
2521 Female, age 94, right hemisphere 111.8
Subiculum
nTPM: 140.4
2042 Male, age 76, both hemispheres 178.1
2438 Female, age 94, left hemisphere 151.4
1901 Male, age 80, both hemispheres 148.3
1977 Female, age 85, both hemispheres 140.1
2619 Male, age 74, both hemispheres 120.1
2729 Female, age 91, right hemisphere 104.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 149.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 149.1
Samples: 197

Max nTPM: 638.9
Min nTPM: 80.5
Std nTPM: 56.1
Median nTPM: 139.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 638.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 377.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 360.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 337.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 330.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 295.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 238.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 233.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 227.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 227.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 215.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 425.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 425.4
FF:10169-103B7 60 years, female 454.8
FF:10153-102I9 76 years, female 396.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 228.4
Pig sample Sample description nTPM
Subiculum
nTPM: 196.8
Samples: 4

Max nTPM: 234.7
Min nTPM: 178.9
Sample A Female 234.7
Sample B Female 189.9
Sample C Male 178.9
Sample D Male 183.5
Dorsal hippocampus
nTPM: 228.4
Samples: 4

Max nTPM: 295.8
Min nTPM: 162.4
Sample A Female 295.8
Sample B Female 208.5
Sample C Male 247.0
Sample D Male 162.4
Entorhinal cortex
nTPM: 167.9
Samples: 4

Max nTPM: 191.9
Min nTPM: 145.4
Sample A Female 167.3
Sample B Female 191.9
Sample C Male 166.9
Sample D Male 145.4
Ventral hippocampus
nTPM: 199.1
Samples: 4

Max nTPM: 215.8
Min nTPM: 161.9
Sample A Female 212.8
Sample B Female 161.9
Sample C Male 205.7
Sample D Male 215.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 97.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.4
Samples: 4

Max nTPM: 94.6
Min nTPM: 84.7
Sample A Male 86.8
Sample B Male 84.7
Sample C Female 94.6
Sample D Female 87.5
Hippocampal formation
nTPM: 97.2
Samples: 4

Max nTPM: 106.2
Min nTPM: 89.9
Sample A Male 106.2
Sample B Male 94.9
Sample C Female 97.6
Sample D Female 89.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
75214937 Antisense, RP_060427_01_A04, Mouse strain C57BL/6J (56 days, male) 9.8

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