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ACSS3
HPA
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  • ACSS3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ACSS3
Synonyms FLJ21963
Gene descriptioni

Full gene name according to HGNC.

Acyl-CoA synthetase short chain family member 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q21.31
Chromosome location (bp) 80936414 - 81261210
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000111058 (version 109)
Entrez gene 79611
HGNC HGNC:24723
UniProt Q9H6R3 (UniProt - Evidence at protein level)
neXtProt NX_Q9H6R3
GeneCards ACSS3
Antibodypedia ACSS3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalyzes the synthesis of acetyl-CoA from short-chain fatty acids 1. Propionate is the preferred substrate 2. Can utilize acetate and butyrate with a much lower affinity (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ligase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid metabolism
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables propionate-CoA ligase activity. Predicted to be involved in ketone body biosynthetic process. Located in mitochondrial matrix. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ACSS3-201
ENSP00000261206
ENST00000261206
A0A0B4J1R2
[Direct mapping] Propionate--CoA ligase
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003987 [acetate-CoA ligase activity]
GO:0005739 [mitochondrion]
GO:0006629 [lipid metabolic process]
GO:0016405 [CoA-ligase activity]
GO:0016878 [acid-thiol ligase activity]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0050218 [propionate-CoA ligase activity]
Show all
685 aa
74.6 kDa
No 1
ACSS3-203
ENSP00000449535
ENST00000548058
Q9H6R3
[Direct mapping] Acyl-CoA synthetase short-chain family member 3, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003987 [acetate-CoA ligase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006629 [lipid metabolic process]
GO:0016405 [CoA-ligase activity]
GO:0016874 [ligase activity]
GO:0016878 [acid-thiol ligase activity]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046951 [ketone body biosynthetic process]
GO:0047760 [butyrate-CoA ligase activity]
GO:0050218 [propionate-CoA ligase activity]
Show all
686 aa
74.8 kDa
No 1
ACSS3-206
ENSP00000447748
ENST00000549175
F8VZB4
[Direct mapping] Acyl-CoA synthetase short-chain family member 3, mitochondrial
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
93 aa
10.2 kDa
No 1

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