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  • ALDH2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:150.3 nTPM
HPA Brain:124.6 nTPM
GTEx:150.3 nTPM
FANTOM5:377.2 Scaled Tags Per Million
Pig:35.7 nTPM
Mouse:141.6 nTPM
Allen mouse:2.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051065
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 124.6
2481 Female, age 94, left hemisphere 179.6
2290 Female, age 72, unknown 142.4
1857 Female, age 85, left hemisphere 124.0
1854 Male, age 80, left hemisphere 121.5
2289 Male, age 61, right hemisphere 117.9
2288 Male, age 75, left hemisphere 117.1
1781 Male, age 74, unknown 101.0
2846 Female, age 79, unknown 93.7
Globus pallidus, externus
nTPM: 102.7
2646 Male, age 61, right hemisphere 153.5
1996 Male, age 80, right hemisphere 126.8
2772 Female, age 79, unknown 107.4
2395 Male, age 75, both hemispheres 75.6
2567 Female, age 72, unknown 50.4
Globus pallidus, internus
nTPM: 97.5
2483 Female, age 94, right hemisphere 153.8
2037 Male, age 80, right hemisphere 111.4
1818 Male, age 74, unknown 106.3
2287 Male, age 75, right hemisphere 105.9
2778 Female, age 91, both hemispheres 92.9
2566 Female, age 72, unknown 56.4
2111 Female, age 85, right hemisphere 55.8
Nucleus accumbens
nTPM: 102.6
2286 Male, age 75, left hemisphere 116.6
1806 Female, age 85, left hemisphere 112.2
1856 Female, age 91, right hemisphere 105.4
2698 Female, age 72, unknown 104.8
1783 Male, age 74, unknown 103.2
2391 Female, age 94, left hemisphere 98.7
2824 Male, age 61, right hemisphere 97.5
2732 Male, age 80, right hemisphere 82.3
Nucleus basalis of Meynert
nTPM: 108.8
2569 Male, age 61, both hemispheres 178.6
2484 Female, age 94, left hemisphere 100.0
2393 Male, age 80, right hemisphere 90.0
2821 Male, age 75, both hemispheres 66.7
Nucleus of the diagonal band
nTPM: 83.6
2195 Female, age 85, both hemispheres 91.7
1979 Male, age 74, unknown 87.7
2775 Male, age 80, right hemisphere 87.4
1812 Female, age 91, both hemispheres 82.6
2029 Male, age 61, right hemisphere 68.6
Putamen
nTPM: 102.4
2482 Female, age 94, left hemisphere 133.6
1838 Male, age 80, right hemisphere 111.5
2466 Female, age 79, unknown 102.6
2489 Female, age 72, unknown 99.3
1937 Female, age 91, right hemisphere 94.3
1829 Male, age 74, unknown 93.6
2647 Male, age 75, left hemisphere 81.7
Septal nuclei
nTPM: 85.3
2059 Female, age 85, both hemispheres 106.4
1960 Male, age 74, unknown 93.4
2199 Male, age 80, right hemisphere 85.1
2629 Female, age 94, right hemisphere 79.7
2031 Female, age 72, unknown 79.1
2009 Female, age 91, both hemispheres 77.2
2394 Male, age 61, left hemisphere 76.2
Stria terminalis, bed nucleus
nTPM: 77.8
2201 Male, age 74, unknown 84.4
1974 Female, age 91, both hemispheres 77.9
2486 Female, age 94, both hemispheres 70.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 150.3
Samples: 246

Max nTPM: 356.3
Min nTPM: 34.2
Std nTPM: 53.1
Median nTPM: 141.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 356.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 331.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 320.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 314.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 308.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 267.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 264.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 260.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 259.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 256.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 246.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 243.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 241.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 240.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 240.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 237.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 236.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 233.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 232.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 231.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 225.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 224.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 224.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 222.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 218.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 214.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 214.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 211.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 208.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 208.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 207.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 205.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 204.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 204.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 203.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 203.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 203.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 202.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 202.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 201.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 197.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 197.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 197.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 197.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 195.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 195.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 194.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 194.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 194.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 193.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 192.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 192.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 191.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 188.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 188.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 187.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 184.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 183.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 183.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 182.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 182.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 181.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 181.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 178.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 177.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 176.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 176.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 175.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 175.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 174.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 173.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 173.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 172.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 169.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 168.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 168.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 166.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 165.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 164.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 164.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 162.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 161.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 160.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 160.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 160.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 159.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 159.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 158.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 157.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 157.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 157.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 157.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 156.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 156.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 156.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 156.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 155.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 155.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 155.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 154.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 154.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 154.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 153.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 153.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 153.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 153.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 151.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 150.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 150.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 149.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 148.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 147.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 147.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 146.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 145.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 145.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 145.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 144.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 143.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 143.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 143.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 143.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 141.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 141.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 140.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 139.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 139.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 139.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 139.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 139.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 139.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 139.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 138.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 137.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 137.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 135.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 135.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 135.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 134.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 134.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 134.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 133.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 133.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 133.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 133.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 132.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 132.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 132.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 132.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 132.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 132.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 131.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 131.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 130.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 129.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 129.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 129.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 128.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 128.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 128.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 128.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 128.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 127.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 127.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 127.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 127.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 126.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 125.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 125.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 125.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 124.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 123.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 123.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 123.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 122.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 120.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 119.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 118.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 118.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 116.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 116.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 116.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 116.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 116.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 116.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 115.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 114.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 114.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 114.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 114.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 113.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 113.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 112.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 112.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 111.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 110.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 109.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 109.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 108.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 107.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 107.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 105.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 105.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 105.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 103.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 103.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 103.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 102.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 102.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 102.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 101.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 100.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 99.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 98.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 95.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 94.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 93.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 90.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 90.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 89.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 89.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 88.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 87.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 83.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 83.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 79.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 79.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 78.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 78.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 78.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 78.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 77.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 73.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 69.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 69.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 66.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 65.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 56.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 54.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 53.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 51.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 47.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 46.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 40.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 127.3
Samples: 246

Max nTPM: 411.9
Min nTPM: 39.3
Std nTPM: 52.8
Median nTPM: 115.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 411.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 302.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 295.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 277.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 268.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 266.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 262.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 262.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 256.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 251.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 250.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 248.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 245.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 241.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 238.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 232.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 231.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 230.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 229.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 223.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 213.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 200.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 194.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 192.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 190.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 188.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 185.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 185.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 179.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 179.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 179.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 178.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 177.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 176.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 175.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 174.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 172.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 172.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 170.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 170.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 168.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 167.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 163.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 162.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 162.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 162.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 162.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 159.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 158.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 157.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 157.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 156.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 155.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 153.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 151.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 151.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 150.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 150.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 149.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 149.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 149.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 147.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 146.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 144.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 142.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 142.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 142.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 141.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 140.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 140.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 140.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 140.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 139.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 139.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 139.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 136.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 135.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 133.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 132.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 132.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 132.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 131.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 131.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 131.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 131.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 130.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 130.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 130.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 130.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 129.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 128.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 128.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 127.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 127.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 127.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 127.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 127.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 127.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 126.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 126.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 125.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 124.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 124.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 124.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 124.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 123.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 123.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 122.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 120.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 120.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 120.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 119.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 119.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 118.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 118.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 118.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 117.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 117.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 116.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 116.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 116.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 116.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 115.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 115.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 115.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 114.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 113.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 113.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 113.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 113.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 113.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 113.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 113.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 112.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 112.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 111.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 111.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 111.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 111.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 110.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 110.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 109.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 109.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 109.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 108.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 108.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 108.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 108.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 107.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 107.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 107.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 106.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 106.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 106.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 106.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 105.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 105.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 102.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 102.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 102.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 101.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 101.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 101.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 100.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 100.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 100.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 99.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 99.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 99.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 98.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 98.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 97.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 97.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 96.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 96.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 96.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 96.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 96.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 94.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 94.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 93.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 93.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 92.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 92.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 91.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 91.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 91.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 91.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 91.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 90.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 90.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 90.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 90.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 89.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 89.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 88.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 88.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 86.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 86.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 86.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 86.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 85.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 85.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 84.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 84.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 84.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 83.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 82.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 82.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 81.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 81.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 80.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 80.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 80.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 79.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 79.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 76.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 76.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 75.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 75.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 75.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 74.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 73.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 73.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 72.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 72.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 71.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 71.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 70.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 68.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 68.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 68.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 68.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 66.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 63.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 63.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 61.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 59.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 59.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 56.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 55.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 53.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 50.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 49.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 48.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 39.3
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Brain - Putamen (basal ganglia)
Average nTPM: 146.9
Samples: 205

Max nTPM: 387.6
Min nTPM: 50.4
Std nTPM: 58.9
Median nTPM: 134.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 387.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 371.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 343.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 313.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 290.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 274.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 273.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 272.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 271.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 268.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 259.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 253.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 253.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 244.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 234.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 229.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 229.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 226.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 225.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 224.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 222.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 219.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 218.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 217.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 217.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 215.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 213.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 212.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 212.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 209.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 209.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 209.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 209.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 208.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 205.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 203.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 202.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 202.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 202.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 200.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 194.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 188.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 186.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 186.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 185.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 184.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 183.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 183.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 182.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 180.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 178.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 171.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 171.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 171.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 170.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 169.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 169.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 169.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 166.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 165.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 164.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 164.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 163.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 163.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 162.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 159.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 159.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 159.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 157.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 156.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 156.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 154.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 153.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 152.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 152.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 151.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 151.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 150.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 149.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 148.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 148.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 145.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 145.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 144.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 144.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 143.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 141.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 141.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 140.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 140.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 140.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 140.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 140.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 140.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 140.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 138.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 138.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 137.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 137.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 136.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 136.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 135.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 134.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 134.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 134.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 134.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 134.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 134.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 131.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 131.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 131.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 131.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 130.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 129.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 129.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 128.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 127.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 127.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 127.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 125.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 123.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 123.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 122.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 121.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 120.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 120.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 120.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 120.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 119.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 117.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 117.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 117.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 116.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 116.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 115.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 115.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 115.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 114.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 114.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 113.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 113.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 112.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 112.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 112.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 112.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 111.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 110.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 109.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 109.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 109.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 109.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 109.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 108.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 108.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 108.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 107.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 106.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 106.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 106.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 105.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 105.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 104.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 104.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 104.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 103.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 100.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 100.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 100.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 98.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 98.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 98.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 97.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 97.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 97.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 96.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 95.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 93.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 93.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 92.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 92.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 91.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 90.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 90.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 89.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 89.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 89.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 88.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 86.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 86.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 83.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 74.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 67.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 65.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 65.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 63.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 63.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 58.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 56.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 55.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 54.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 54.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 54.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 53.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 51.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 50.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

377.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 377.2
FF:10164-103B2 76 years, female 377.2
Nucleus accumbens
Scaled Tags Per Million: 228.0
FF:10037-101F1 23-56 years, mixed 228.0
Putamen
Scaled Tags Per Million: 315.3
FF:10176-103C5 60 years, female 315.3
Globus pallidus
Scaled Tags Per Million: 357.0
FF:10175-103C4 60 years, female 399.4
FF:10161-103A8 76 years, female 314.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.7
Pig sample Sample description nTPM
Caudate
nTPM: 20.9
Samples: 4

Max nTPM: 21.9
Min nTPM: 19.8
Sample A Female 21.9
Sample B Female 20.3
Sample C Male 19.8
Sample D Male 21.7
Putamen
nTPM: 35.7
Samples: 4

Max nTPM: 55.4
Min nTPM: 23.1
Sample A Female 55.4
Sample B Female 23.1
Sample C Male 30.3
Sample D Male 33.8
Septum
nTPM: 22.7
Samples: 4

Max nTPM: 24.5
Min nTPM: 20.3
Sample A Female 22.0
Sample B Female 20.3
Sample C Male 24.5
Sample D Male 24.1
Ventral pallidum
nTPM: 27.5
Samples: 4

Max nTPM: 33.7
Min nTPM: 21.7
Sample A Female 21.7
Sample B Female 25.0
Sample C Male 33.7
Sample D Male 29.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

141.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 141.6
Samples: 4

Max nTPM: 153.1
Min nTPM: 129.1
Sample A Male 153.1
Sample B Male 147.5
Sample C Female 129.1
Sample D Female 136.8
Septum
nTPM: 111.8
Samples: 4

Max nTPM: 123.8
Min nTPM: 104.8
Sample A Male 104.8
Sample B Male 110.8
Sample C Female 123.8
Sample D Female 107.8
Ventral forebrain
nTPM: 127.2
Samples: 4

Max nTPM: 148.3
Min nTPM: 115.8
Sample A Male 115.9
Sample B Male 128.7
Sample C Female 148.3
Sample D Female 115.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.3
81655578 Antisense, RP_090413_01_C03, Mouse strain C57BL/6J (56 days, male) 3.1
74819240 Antisense, RP_060315_02_C04, Mouse strain C57BL/6J (56 days, male) 1.4
Pallidum
Expression energy: 1.6
81655578 Antisense, RP_090413_01_C03, Mouse strain C57BL/6J (56 days, male) 2.3
74819240 Antisense, RP_060315_02_C04, Mouse strain C57BL/6J (56 days, male) 1.0

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