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OGFOD2
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • OGFOD2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

OGFOD2
Synonyms FLJ13491, FLJ37501
Gene descriptioni

Full gene name according to HGNC.

2-oxoglutarate and iron dependent oxygenase domain containing 2
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q24.31
Chromosome location (bp) 122974580 - 122980043
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000111325 (version 109)
Entrez gene 79676
HGNC HGNC:25823
UniProt Q6N063 (UniProt - Evidence at protein level)
neXtProt NX_Q6N063
GeneCards OGFOD2
Antibodypedia OGFOD2 antibodies


PROTEIN FUNCTION
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Dioxygenase, Oxidoreductase
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Iron, Metal-binding, Vitamin C
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable several functions, including L-ascorbic acid binding activity; dioxygenase activity; and iron ion binding activity. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
OGFOD2-201
ENSP00000228922
ENST00000228922
Q6N063
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005506 [iron ion binding]
GO:0016491 [oxidoreductase activity]
GO:0016705 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen]
GO:0031418 [L-ascorbic acid binding]
GO:0046872 [metal ion binding]
GO:0051213 [dioxygenase activity]
Show all
350 aa
39 kDa
No 0
OGFOD2-202
ENSP00000380544
ENST00000397389
Q6N063
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005506 [iron ion binding]
GO:0005515 [protein binding]
GO:0016491 [oxidoreductase activity]
GO:0016705 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen]
GO:0031418 [L-ascorbic acid binding]
GO:0046872 [metal ion binding]
GO:0051213 [dioxygenase activity]
Show all
290 aa
32.1 kDa
No 0
OGFOD2-205
ENSP00000394175
ENST00000454694
Q6N063
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
A0A024RBQ7
[Target identity:100%; Query identity:100%] 2-oxoglutarate and iron-dependent oxygenase domain containing 2, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005506 [iron ion binding]
GO:0016491 [oxidoreductase activity]
GO:0016705 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen]
GO:0031418 [L-ascorbic acid binding]
GO:0046872 [metal ion binding]
GO:0051213 [dioxygenase activity]
Show all
186 aa
20.3 kDa
No 0
OGFOD2-207
ENSP00000438327
ENST00000536150
Q6N063
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
A0A024RBQ7
[Target identity:100%; Query identity:100%] 2-oxoglutarate and iron-dependent oxygenase domain containing 2, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005506 [iron ion binding]
GO:0016491 [oxidoreductase activity]
GO:0016705 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen]
GO:0031418 [L-ascorbic acid binding]
GO:0046872 [metal ion binding]
GO:0051213 [dioxygenase activity]
Show all
186 aa
20.3 kDa
No 0
OGFOD2-208
ENSP00000438003
ENST00000536439
F5H145
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005506 [iron ion binding]
GO:0016491 [oxidoreductase activity]
GO:0016705 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen]
GO:0031418 [L-ascorbic acid binding]
GO:0046872 [metal ion binding]
GO:0051213 [dioxygenase activity]
Show all
160 aa
17.5 kDa
No 0
OGFOD2-210
ENSP00000442083
ENST00000537966
F5H890
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
207 aa
22.6 kDa
No 0
OGFOD2-211
ENSP00000444608
ENST00000538628
Q6N063
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
A0A024RBQ7
[Target identity:100%; Query identity:100%] 2-oxoglutarate and iron-dependent oxygenase domain containing 2, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005506 [iron ion binding]
GO:0016491 [oxidoreductase activity]
GO:0016705 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen]
GO:0031418 [L-ascorbic acid binding]
GO:0046872 [metal ion binding]
GO:0051213 [dioxygenase activity]
Show all
186 aa
20.3 kDa
No 0
OGFOD2-212
ENSP00000442817
ENST00000538755
Q6N063
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
A0A024RBQ7
[Target identity:100%; Query identity:100%] 2-oxoglutarate and iron-dependent oxygenase domain containing 2, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005506 [iron ion binding]
GO:0016491 [oxidoreductase activity]
GO:0016705 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen]
GO:0031418 [L-ascorbic acid binding]
GO:0046872 [metal ion binding]
GO:0051213 [dioxygenase activity]
Show all
186 aa
20.3 kDa
No 0
OGFOD2-221
ENSP00000442476
ENST00000545056
F5H145
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005506 [iron ion binding]
GO:0016491 [oxidoreductase activity]
GO:0016705 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen]
GO:0031418 [L-ascorbic acid binding]
GO:0046872 [metal ion binding]
GO:0051213 [dioxygenase activity]
Show all
160 aa
17.5 kDa
No 0
OGFOD2-222
ENSP00000438192
ENST00000545317
Q6N063
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
A0A024RBQ7
[Target identity:100%; Query identity:100%] 2-oxoglutarate and iron-dependent oxygenase domain containing 2, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005506 [iron ion binding]
GO:0016491 [oxidoreductase activity]
GO:0016705 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen]
GO:0031418 [L-ascorbic acid binding]
GO:0046872 [metal ion binding]
GO:0051213 [dioxygenase activity]
Show all
186 aa
20.3 kDa
No 0
OGFOD2-224
ENSP00000444436
ENST00000545612
Q6N063
[Direct mapping] 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
Show all
A0A024RBQ7
[Target identity:100%; Query identity:100%] 2-oxoglutarate and iron-dependent oxygenase domain containing 2, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005506 [iron ion binding]
GO:0016491 [oxidoreductase activity]
GO:0016705 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen]
GO:0031418 [L-ascorbic acid binding]
GO:0046872 [metal ion binding]
GO:0051213 [dioxygenase activity]
Show all
186 aa
20.3 kDa
No 0

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