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MDM1
HPA
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  • MDM1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

MDM1
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Mdm1 nuclear protein
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q15
Chromosome location (bp) 68272443 - 68332381
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000111554 (version 109)
Entrez gene 56890
HGNC HGNC:29917
UniProt Q8TC05 (UniProt - Evidence at protein level)
neXtProt NX_Q8TC05
GeneCards MDM1
Antibodypedia MDM1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Microtubule-binding protein that negatively regulates centriole duplication. Binds to and stabilizes microtubules 1.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a microtubule-binding nuclear protein that localizes to the centrioles of dividing cells and differentiating multiciliated cells and negatively regulates centriole duplication. The encoded protein is closely associated with the centriole barrel, and resides in the centriole lumen. Naturally-occurring mutations in the orthologous mouse gene are associated with age-related retinal degeneration. [provided by RefSeq, Feb 2019]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
MDM1-201
ENSP00000302537
ENST00000303145
Q8TC05
[Direct mapping] Nuclear protein MDM1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0008017 [microtubule binding]
GO:0034451 [centriolar satellite]
GO:0046600 [negative regulation of centriole replication]
GO:0060041 [retina development in camera-type eye]
Show all
714 aa
80.7 kDa
No 0
MDM1-203
ENSP00000377175
ENST00000393543
Q8TC05
[Direct mapping] Nuclear protein MDM1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0008017 [microtubule binding]
GO:0034451 [centriolar satellite]
GO:0046600 [negative regulation of centriole replication]
GO:0060041 [retina development in camera-type eye]
Show all
69 aa
7.9 kDa
No 0
MDM1-204
ENSP00000391006
ENST00000411698
Q8TC05
[Direct mapping] Nuclear protein MDM1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0008017 [microtubule binding]
GO:0034451 [centriolar satellite]
GO:0046600 [negative regulation of centriole replication]
GO:0060041 [retina development in camera-type eye]
Show all
679 aa
76.7 kDa
No 0
MDM1-205
ENSP00000408694
ENST00000430606
Q8TC05
[Direct mapping] Nuclear protein MDM1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0008017 [microtubule binding]
GO:0034451 [centriolar satellite]
GO:0046600 [negative regulation of centriole replication]
GO:0060041 [retina development in camera-type eye]
Show all
222 aa
25.1 kDa
No 1
MDM1-209
ENSP00000445181
ENST00000539972
H0YGX6
[Direct mapping] Nuclear protein MDM1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0008017 [microtubule binding]
GO:0046600 [negative regulation of centriole replication]
Show all
121 aa
13.6 kDa
No 0
MDM1-213
ENSP00000446000
ENST00000541686
F5H529
[Direct mapping] Nuclear protein MDM1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0008017 [microtubule binding]
GO:0046600 [negative regulation of centriole replication]
Show all
280 aa
31.9 kDa
No 0
MDM1-216
ENSP00000507100
ENST00000682720
A0A804HIJ5
[Direct mapping] Nuclear protein MDM1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0008017 [microtubule binding]
GO:0046600 [negative regulation of centriole replication]
Show all
724 aa
81.9 kDa
No 0

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