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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: High
Bergmann glia - nucleus: High
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: High
Molecular layer cells - nucleus: High
Processes in granular layer: Low
Processes in molecular layer: High
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:108.3 nTPM
HPA Brain:175.0 nTPM
GTEx:108.3 nTPM
FANTOM5:127.6 Scaled Tags Per Million
Pig:6.4 nTPM
Mouse:1.3 nTPM
Allen mouse:4.7 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031235
Bergmann glia - cytoplasm/membrane High
Bergmann glia - nucleus High
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Low
Molecular layer cells - cytoplasm/membrane High
Molecular layer cells - nucleus High
Processes in granular layer Low
Processes in molecular layer High
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

175.0
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 161.4
1774 Male, age 80, left hemisphere 251.0
1769 Male, age 76, right hemisphere 209.6
2055 Female, age 91, right hemisphere 181.5
1788 Male, age 55, unknown 142.4
2101 Male, age 74, right hemisphere 141.3
1768 Female, age 72, unknown 134.9
2006 Male, age 61, right hemisphere 115.4
2003 Female, age 85, right hemisphere 114.8
Cerebellar nuclei
nTPM: 13.7
2318 Male, age 74, left hemisphere 63.4
1966 Female, age 91, left hemisphere 11.6
2005 Male, age 80, left hemisphere 9.2
1871 Male, age 74, unknown 8.4
2175 Male, age 61, right hemisphere 6.9
2882 Male, age 76, left hemisphere 6.7
2177 Female, age 85, both hemispheres 6.3
1879 Male, age 55, unknown 5.7
2783 Female, age 72, unknown 5.4
Flocculonodular lobe
nTPM: 175.0
1771 Male, age 80, left hemisphere 248.6
1767 Male, age 76, left hemisphere 227.6
2176 Female, age 91, right hemisphere 198.9
1835 Female, age 85, right hemisphere 173.9
1765 Male, age 55, unknown 146.8
1792 Male, age 74, unknown 116.0
2004 Male, age 61, right hemisphere 112.9
Vermis
nTPM: 144.9
1988 Female, age 85, left hemisphere 219.9
1770 Male, age 76, left hemisphere 200.5
1778 Female, age 91, left hemisphere 179.2
1751 Male, age 74, right hemisphere 143.3
1928 Female, age 72, unknown 126.0
2834 Male, age 80, left hemisphere 124.1
1766 Male, age 55, unknown 123.5
1825 Male, age 74, unknown 110.6
2460 Male, age 61, both hemispheres 76.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.3
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 91.7
Samples: 215

Max nTPM: 221.6
Min nTPM: 2.8
Std nTPM: 33.1
Median nTPM: 84.1
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 221.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 210.9
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 199.8
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 194.2
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 193.0
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 169.5
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 168.0
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 166.3
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 165.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 164.4
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 157.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 152.4
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 150.5
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 149.7
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 147.8
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 147.3
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 146.8
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 146.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 143.3
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 141.8
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 140.1
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 138.8
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 133.1
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 132.4
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 132.0
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 131.3
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 127.9
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 127.5
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 127.0
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 125.4
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 124.7
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 123.1
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 121.8
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 121.5
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 120.2
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 120.1
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 119.6
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 118.2
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 114.7
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 114.0
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 112.7
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 112.6
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 112.3
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 110.6
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 110.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 109.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 109.5
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 108.6
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 108.5
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 107.8
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 106.9
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 106.2
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 106.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 105.9
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 105.4
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 105.0
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 104.8
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 104.7
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 104.6
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 104.4
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 104.4
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 103.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 102.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 102.0
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 102.0
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 101.8
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 101.8
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 101.6
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 100.8
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 100.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 100.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 99.9
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 98.7
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 98.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 97.1
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 96.4
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 96.3
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 95.8
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 95.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 95.4
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 95.2
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 94.7
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 94.6
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 93.7
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 93.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 93.1
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 92.9
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 92.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 92.4
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 92.4
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 91.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 91.5
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 91.2
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 90.5
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 89.7
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 89.4
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 89.1
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 89.1
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 89.0
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 88.0
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 87.9
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 87.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 87.6
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 87.3
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 87.1
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 86.6
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 86.0
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 84.1
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 83.6
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 83.4
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 83.4
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 83.3
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 82.7
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 82.6
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 82.6
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 82.5
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 82.1
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 81.6
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 81.5
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 81.3
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 80.8
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 80.5
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 80.5
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 80.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 79.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 79.3
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 79.0
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 78.8
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 78.7
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 78.7
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 78.7
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 78.2
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 77.7
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 77.6
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 77.6
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 77.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 77.1
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 76.3
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 76.2
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 76.1
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 75.9
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 75.8
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 75.6
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 75.5
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 75.4
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 75.1
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 75.1
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 74.8
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 74.4
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 73.4
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 73.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 72.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 72.0
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 71.2
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 71.1
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 71.0
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 70.9
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 70.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 70.3
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 68.4
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 68.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 67.4
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 67.2
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 67.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 67.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 66.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 66.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 66.4
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 66.2
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 66.2
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 65.9
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 65.6
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 65.4
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 65.0
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 65.0
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 64.4
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 64.4
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 63.9
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 63.1
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 62.9
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 62.7
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 62.4
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 62.2
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 62.1
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 60.5
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 59.8
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 59.7
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 59.5
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 59.1
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 59.0
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 58.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 58.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 58.5
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 57.9
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 57.5
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 57.3
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 57.2
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 56.5
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 56.5
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 56.4
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 56.3
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 55.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 54.4
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 53.4
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 52.8
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 52.6
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 50.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 49.0
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 48.6
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 47.1
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 46.2
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 44.0
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 40.1
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 25.9
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 2.8
Show allShow less
Brain - Cerebellum
Average nTPM: 108.3
Samples: 241

Max nTPM: 222.2
Min nTPM: 58.3
Std nTPM: 32.9
Median nTPM: 101.1
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 222.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 219.4
GTEX-X261-3126-SM-4PQZC 50-59 years, male 211.1
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 208.6
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 196.9
GTEX-1192X-3226-SM-5987D 50-59 years, male 192.7
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 183.5
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 182.5
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 179.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 174.7
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 171.9
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 171.2
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 169.7
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 165.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 165.4
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 164.9
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 164.6
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 163.8
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 163.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 162.2
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 161.5
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 161.2
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 159.2
GTEX-14PN4-3026-SM-664O4 50-59 years, male 157.0
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 156.8
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 155.3
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 154.2
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 153.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 152.2
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 149.4
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 147.8
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 147.5
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 147.2
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 145.7
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 143.1
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 142.5
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 141.1
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 140.9
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 140.4
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 139.7
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 138.8
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 138.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 138.2
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 138.1
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 137.6
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 137.4
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 137.4
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 136.3
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 136.1
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 135.0
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 134.5
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 133.5
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 133.3
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 132.7
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 132.7
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 132.4
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 131.5
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 128.9
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 128.7
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 127.9
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 126.8
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 125.8
GTEX-145LS-3026-SM-5O99S 60-69 years, female 125.7
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 124.6
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 124.2
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 122.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 122.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 120.4
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 120.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 118.4
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 118.2
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 117.6
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 117.6
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 117.5
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 116.8
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 116.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 116.2
GTEX-17HII-2926-SM-79OMK 50-59 years, male 116.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 116.1
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 116.0
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 115.6
GTEX-17EVP-2926-SM-793BU 40-49 years, male 115.4
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 115.3
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 114.6
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 114.6
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 114.1
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 113.4
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 113.4
GTEX-11DYG-2926-SM-5H132 60-69 years, male 112.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 112.0
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 111.8
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 111.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 111.2
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 110.8
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 110.7
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 110.0
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 109.5
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 109.4
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 109.3
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 108.9
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 108.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 108.6
GTEX-14E6D-2926-SM-664OP 50-59 years, male 108.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 107.6
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 107.6
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 107.5
GTEX-11EI6-2926-SM-5985U 60-69 years, male 107.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 106.7
GTEX-14ABY-3026-SM-664NE 50-59 years, male 106.5
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 106.2
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 105.6
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 105.0
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 104.9
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 104.3
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 104.2
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 103.7
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 103.4
GTEX-11ONC-3026-SM-5985W 60-69 years, male 102.6
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 102.1
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 101.4
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 101.1
GTEX-WL46-2826-SM-3LK81 50-59 years, male 100.8
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 100.4
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 100.4
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 99.9
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 99.3
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 99.2
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 98.8
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 97.9
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 97.5
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 97.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 97.1
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 97.0
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 96.9
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 96.8
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 96.4
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 96.4
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 96.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 95.7
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 95.6
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 94.7
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 94.2
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 93.8
GTEX-11NUK-3026-SM-5986K 50-59 years, male 93.7
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 93.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 93.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 93.5
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 93.5
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 93.5
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 92.3
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 92.1
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 91.0
GTEX-1B933-3026-SM-731DB 50-59 years, female 90.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 90.8
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 90.8
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 90.5
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 90.3
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 90.3
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 90.0
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 89.8
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 89.4
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 89.2
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 89.0
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 88.7
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 88.6
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 88.3
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 88.2
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 88.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 87.8
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 87.6
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 87.2
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 86.9
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 86.5
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 86.2
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 86.1
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 85.8
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 85.7
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 85.5
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 85.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 84.6
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 84.3
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 83.8
GTEX-RU72-2926-SM-2TF66 50-59 years, female 83.4
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 83.3
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 82.8
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 82.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 82.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 81.4
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 81.3
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 81.2
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 80.9
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 80.3
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 80.2
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 80.1
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 78.4
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 78.4
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 77.5
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 77.4
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 77.2
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 76.8
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 76.4
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 76.4
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 76.3
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 76.1
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 75.5
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 74.9
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 74.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 74.7
GTEX-13112-2926-SM-5DUWT 50-59 years, male 74.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 74.6
GTEX-12126-0926-SM-5FQTW 20-29 years, male 74.5
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 74.5
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 73.9
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 73.8
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 73.6
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 73.5
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 73.4
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 73.4
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 73.4
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 73.1
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 72.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 72.4
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 71.6
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 71.5
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 71.3
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 69.6
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 67.6
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 67.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 67.1
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 66.0
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 65.6
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 64.6
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 64.0
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 63.4
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 62.2
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 61.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 61.7
GTEX-144GL-2926-SM-5O99F 50-59 years, male 60.8
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 59.0
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 58.8
GTEX-18465-2926-SM-7KFSE 50-59 years, male 58.3
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

127.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 127.6
FF:10166-103B4 76 years, female 177.2
FF:10083-102B2 22-68 years, mixed 78.0

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.4
Pig sample Sample description nTPM
Cerebellum
nTPM: 6.5
Samples: 4

Max nTPM: 8.7
Min nTPM: 4.7
Sample A Female 5.1
Sample B Female 8.7
Sample C Male 7.3
Sample D Male 4.7

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.3
Mouse sample Sample description nTPM
Cerebellum
nTPM: 1.4
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.1
Sample A Male 1.5
Sample B Male 1.6
Sample C Female 1.1
Sample D Female 1.2

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.7
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 4.7
69752149 Antisense, RP_050505_01_C04, Mouse strain C57BL/6J (56 days, male) 8.5
71924514 Antisense, RP_050630_03_E05, Mouse strain C57BL/6J (56 days, male) 0.9
70722910 Antisense, RP_050630_03_E05, Mouse strain C57BL/6J (56 days, male) 0.6

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