PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		21.087
Mouse brain, Intensity
Ponsi 		11.844
RNA expressioni
HPA Brain:66.6 nTPM
FANTOM5:151.4 Scaled Tags Per Million
Pig:46.1 nTPM
Mouse:25.2 nTPM
Allen mouse:6.7 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA004105
Medulla oblongata mean intensity 21.087
intensityi
FRONT BACK
Nucleus of the solitary tract 8.069
Raphe magnus nucleus 10.402
Cochlear nucleus 9.060
Lateral paragigantocellular nucleus 5.543
Raphe pallidus nucleus 5.332
Facial nucleus 5.360
Hypoglossal nucleus 15.754
Ambiguus nucleus 18.623
External cuneate nucleus 15.836
Inferior olivary nucleus 14.261
Raphe obscures nucleus 4.014
Dorsal motor nucleus of vagus 21.087
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 4.851
Parabrachial nucleus 6.306
Principle sensory trigeminal nucleus 11.844
Locus coeruleus 7.336
Pontine nucleus 2.327
Vestibular nucleus 8.496
Pontine reticular nucleus, oral 7.594
Lateral lemniscus 1.386
Superior paraolivary nucleus 4.406

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 66.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 49.1
2301 Female, age 85, both hemispheres 59.4
2188 Female, age 91, both hemispheres 57.4
1984 Male, age 76, both hemispheres 43.5
2090 Male, age 80, both hemispheres 36.2
Area postrema
nTPM: 26.2
2306 Male, age 80, both hemispheres 30.9
2054 Male, age 76, both hemispheres 24.1
2799 Male, age 61, both hemispheres 23.7
Dorsal cochlear nucleus
nTPM: 34.2
2187 Female, age 91, both hemispheres 52.5
2802 Male, age 74, right hemisphere 39.0
2378 Male, age 80, both hemispheres 31.6
2058 Male, age 76, both hemispheres 25.2
2370 Male, age 61, both hemispheres 22.7
Dorsal medullary reticular nucleus
nTPM: 35.0
2040 Female, age 85, both hemispheres 39.7
2373 Male, age 61, both hemispheres 36.4
2088 Male, age 76, both hemispheres 29.0
Dorsal motor vagal complex
nTPM: 34.3
2133 Female, age 91, both hemispheres 41.7
2813 Female, age 72, unknown 41.2
2000 Male, age 74, unknown 37.2
2844 Male, age 55, unknown 35.2
2807 Female, age 85, both hemispheres 33.1
2643 Male, age 74, both hemispheres 31.3
2185 Male, age 76, both hemispheres 28.3
2797 Male, age 61, both hemispheres 26.1
Dorsal tegmental nucleus
nTPM: 35.2
2326 Male, age 74, both hemispheres 48.3
2083 Male, age 80, both hemispheres 34.3
2358 Male, age 61, both hemispheres 29.5
1936 Male, age 76, left hemisphere 28.8
Dorsolateral tegmental area
nTPM: 33.1
2751 Female, age 85, both hemispheres 40.1
2654 Male, age 80, both hemispheres 33.6
2360 Male, age 74, both hemispheres 32.8
2337 Male, age 61, both hemispheres 32.4
2141 Male, age 76, both hemispheres 26.4
Gigantocellular reticular nuclei, medullary
nTPM: 46.8
2462 Male, age 74, both hemispheres 55.1
2387 Female, age 91, both hemispheres 53.1
2314 Male, age 61, both hemispheres 51.8
2310 Male, age 80, both hemispheres 46.0
1876 Female, age 85, both hemispheres 42.0
2022 Male, age 76, right hemisphere 33.0
Gigantocellular reticular nuclei, pars
nTPM: 48.2
2168 Male, age 76, both hemispheres 71.2
2330 Male, age 80, both hemispheres 47.2
2706 Male, age 80, both hemispheres 44.3
2336 Male, age 61, both hemispheres 41.2
2084 Female, age 85, both hemispheres 37.3
Inferior olive
nTPM: 43.3
2563 Male, age 74, both hemispheres 50.6
2628 Female, age 91, both hemispheres 48.0
2085 Female, age 85, both hemispheres 44.9
2178 Male, age 61, both hemispheres 41.7
2379 Male, age 80, both hemispheres 31.1
Kolliker-Fuse nucleus
nTPM: 43.5
2793 Female, age 91, left hemisphere 63.0
2163 Male, age 80, both hemispheres 37.5
2315 Male, age 76, right hemisphere 30.2
Lateral lemniscal nuclei
nTPM: 63.2
2169 Male, age 76, both hemispheres 76.1
2453 Male, age 74, right hemisphere 64.2
2320 Female, age 91, left hemisphere 64.0
2746 Female, age 85, left hemisphere 56.4
2036 Male, age 80, both hemispheres 55.4
Lateral medullary reticular nucleus
nTPM: 45.2
2305 Male, age 74, both hemispheres 69.1
2374 Male, age 61, both hemispheres 45.7
2190 Female, age 85, both hemispheres 43.6
2044 Male, age 76, both hemispheres 40.3
2804 Female, age 91, both hemispheres 39.5
2852 Male, age 80, both hemispheres 33.3
Lateral parabrachial nucleus
nTPM: 42.6
2139 Female, age 85, right hemisphere 56.0
2013 Male, age 80, both hemispheres 40.5
2792 Male, age 76, both hemispheres 37.8
2790 Male, age 61, both hemispheres 36.2
Lateral vestibular nucleus
nTPM: 36.3
2311 Male, age 80, both hemispheres 36.7
2184 Male, age 76, both hemispheres 35.8
Locus coeruleus
nTPM: 42.8
2720 Male, age 74, both hemispheres 57.1
2014 Male, age 55, unknown 48.1
2162 Male, age 80, both hemispheres 41.0
2788 Male, age 74, unknown 40.7
2123 Female, age 91, both hemispheres 40.1
2317 Female, age 72, unknown 37.5
1980 Male, age 76, both hemispheres 35.0
Medial olivary nucleus
nTPM: 38.3
2851 Male, age 80, both hemispheres 39.9
2138 Female, age 91, both hemispheres 39.5
1962 Male, age 76, both hemispheres 37.2
1943 Male, age 61, both hemispheres 36.4
Medial parabrachial nucleus
nTPM: 42.1
2854 Male, age 80, both hemispheres 51.8
2170 Female, age 91, both hemispheres 51.0
2463 Female, age 85, right hemisphere 38.7
2156 Male, age 61, both hemispheres 37.0
2786 Male, age 76, both hemispheres 32.2
Medial periolivary nuclei
nTPM: 59.7
2171 Female, age 85, both hemispheres 70.3
2063 Male, age 76, both hemispheres 69.6
2791 Male, age 74, right hemisphere 58.8
2458 Female, age 91, both hemispheres 55.7
2081 Male, age 80, both hemispheres 44.2
Medial vestibular nucleus
nTPM: 41.2
2801 Male, age 74, both hemispheres 60.1
2803 Female, age 91, both hemispheres 46.9
2743 Female, age 85, both hemispheres 37.8
2134 Male, age 76, both hemispheres 34.5
2624 Male, age 61, both hemispheres 34.1
2093 Male, age 80, both hemispheres 33.9
Motor facial nucleus
nTPM: 60.5
2062 Male, age 76, both hemispheres 69.5
2365 Male, age 74, right hemisphere 68.9
2697 Female, age 85, both hemispheres 67.3
2327 Male, age 80, both hemispheres 63.1
2795 Female, age 91, both hemispheres 54.9
2126 Male, age 61, both hemispheres 39.0
Motor hypoglossal nucleus
nTPM: 40.4
2125 Female, age 91, both hemispheres 49.2
2132 Female, age 85, both hemispheres 46.2
2461 Male, age 61, both hemispheres 43.3
2182 Male, age 80, both hemispheres 35.4
2277 Male, age 76, both hemispheres 27.8
Motor trigeminal nucleus
nTPM: 46.2
2560 Male, age 74, both hemispheres 56.6
2321 Female, age 91, both hemispheres 54.1
2079 Male, age 80, both hemispheres 53.9
2335 Male, age 61, both hemispheres 34.9
2309 Male, age 76, both hemispheres 31.7
Nuclei of the trapezoid body
nTPM: 66.0
2159 Male, age 61, both hemispheres 81.3
1983 Male, age 76, both hemispheres 72.9
2735 Female, age 85, both hemispheres 66.8
2368 Female, age 91, both hemispheres 56.4
2166 Male, age 80, both hemispheres 52.8
Nucleus ambiguus
nTPM: 31.7
2071 Male, age 76, both hemispheres 32.9
2096 Female, age 85, both hemispheres 30.5
Nucleus cuneatus
nTPM: 36.8
2564 Male, age 74, both hemispheres 44.9
2808 Female, age 85, both hemispheres 41.3
2381 Male, age 80, both hemispheres 40.1
2376 Male, age 61, both hemispheres 39.1
2131 Male, age 76, both hemispheres 37.3
2380 Male, age 80, both hemispheres 35.5
2805 Female, age 91, both hemispheres 33.9
2562 Male, age 61, both hemispheres 30.8
2100 Male, age 76, both hemispheres 27.9
Nucleus gracilis
nTPM: 40.1
2627 Male, age 74, both hemispheres 49.2
2382 Male, age 80, both hemispheres 39.5
2299 Female, age 85, both hemispheres 31.5
Nucleus raphe magnus
nTPM: 65.5
2160 Male, age 61, both hemispheres 74.9
2455 Male, age 74, both hemispheres 74.9
2172 Female, age 85, both hemispheres 71.2
2459 Female, age 91, both hemispheres 61.2
2328 Male, age 80, both hemispheres 59.0
2051 Male, age 76, both hemispheres 51.7
Nucleus raphe obscurus
nTPM: 45.5
2845 Female, age 85, midline 60.8
2800 Male, age 61, midline 45.2
2142 Male, age 76, midline 30.6
Nucleus raphe pallidus
nTPM: 43.3
1924 Male, age 61, midline 43.6
2145 Male, age 76, midline 43.5
2183 Male, age 80, midline 42.6
Nucleus tractus solitarii
nTPM: 29.3
2656 Male, age 76, both hemispheres 32.4
2144 Female, age 91, right hemisphere 30.1
2307 Male, age 80, both hemispheres 28.9
2191 Female, age 85, both hemispheres 25.7
Paramedian reticular nucleus
nTPM: 41.9
2050 Female, age 85, both hemispheres 62.9
2313 Male, age 61, both hemispheres 37.7
2057 Male, age 80, both hemispheres 34.1
2052 Male, age 76, both hemispheres 32.9
Parvicellular reticular nuclei
nTPM: 45.3
2558 Male, age 74, both hemispheres 57.1
2095 Male, age 76, both hemispheres 46.4
2119 Male, age 80, both hemispheres 32.4
Parvicellular reticular nuclei, medullary
nTPM: 38.5
2189 Female, age 91, both hemispheres 43.9
2091 Female, age 85, both hemispheres 36.5
2181 Male, age 80, left hemisphere 35.0
Pedunculopontine tegmental nucleus
nTPM: 40.5
2338 Male, age 61, both hemispheres 45.1
1921 Female, age 85, both hemispheres 38.3
2334 Male, age 80, both hemispheres 38.0
Peritrigeminal nucleus
nTPM: 44.3
2179 Male, age 61, both hemispheres 50.8
2067 Female, age 85, both hemispheres 41.2
2136 Male, age 76, both hemispheres 40.8
Pontine nuclei
nTPM: 66.6
2454 Male, age 74, left hemisphere 81.8
1863 Male, age 55, unknown 81.0
2109 Female, age 72, unknown 70.3
2787 Female, age 85, both hemispheres 69.1
2727 Male, age 61, right hemisphere 65.6
1968 Male, age 76, left hemisphere 63.7
2319 Female, age 91, both hemispheres 57.8
2115 Male, age 80, left hemisphere 43.5
Pontine raphe nucleus
nTPM: 43.1
2122 Female, age 85, midline 57.7
2853 Male, age 76, midline 28.4
Posteroventral cochlear nucleus
nTPM: 38.7
2135 Female, age 91, both hemispheres 45.0
2752 Female, age 85, both hemispheres 41.6
2341 Male, age 80, both hemispheres 39.6
2070 Male, age 76, both hemispheres 35.3
2371 Male, age 61, both hemispheres 32.2
Prepositus hypoglossal nucleus
nTPM: 35.6
2855 Female, age 85, right hemisphere 43.8
2086 Male, age 80, both hemispheres 27.3
Principal sensory trigeminal nucleus
nTPM: 52.2
2367 Female, age 91, left hemisphere 63.3
2158 Male, age 61, both hemispheres 61.0
2008 Male, age 80, left hemisphere 51.7
2324 Male, age 76, both hemispheres 32.8
Reticular pontine nucleus, caudal
nTPM: 58.1
2457 Female, age 91, both hemispheres 58.5
2559 Male, age 74, both hemispheres 58.5
2092 Male, age 76, both hemispheres 57.8
2332 Male, age 80, right hemisphere 57.4
Reticular pontine nucleus, oral
nTPM: 46.9
2366 Female, age 91, both hemispheres 58.5
2361 Male, age 74, both hemispheres 54.7
2012 Female, age 85, both hemispheres 53.1
1939 Male, age 80, both hemispheres 35.5
2167 Male, age 76, both hemispheres 32.7
Reticulotegmental nucleus
nTPM: 50.7
2322 Female, age 91, both hemispheres 56.9
2452 Male, age 74, both hemispheres 51.8
2325 Male, age 76, both hemispheres 50.3
2333 Male, age 80, both hemispheres 43.7
Spinal trigeminal nucleus, caudal
nTPM: 42.0
2312 Male, age 61, both hemispheres 47.4
2390 Female, age 91, both hemispheres 47.2
2642 Male, age 74, both hemispheres 41.4
2308 Male, age 80, both hemispheres 39.6
2447 Male, age 76, both hemispheres 34.5
Spinal trigeminal nucleus, interpolar
nTPM: 43.8
2066 Male, age 76, right hemisphere 56.6
2389 Female, age 91, both hemispheres 51.2
2386 Female, age 85, both hemispheres 40.3
2625 Male, age 61, both hemispheres 38.3
2033 Male, age 80, both hemispheres 32.6
Spinal trigeminal nucleus, oral
nTPM: 43.1
1978 Male, age 76, both hemispheres 48.9
2164 Male, age 80, both hemispheres 40.9
2737 Female, age 85, both hemispheres 39.6
Spinal vestibular nucleus
nTPM: 38.3
2384 Male, age 74, both hemispheres 45.9
2186 Female, age 91, both hemispheres 44.5
2806 Female, age 85, both hemispheres 42.6
2780 Male, age 80, both hemispheres 34.8
2748 Male, age 76, both hemispheres 34.1
2796 Male, age 61, both hemispheres 27.8
Subcoeruleus area
nTPM: 47.0
2089 Male, age 76, left hemisphere 58.2
1958 Male, age 80, both hemispheres 47.1
2323 Female, age 91, left hemisphere 43.8
2369 Female, age 85, left hemisphere 43.3
2451 Male, age 74, both hemispheres 42.5
Superior olive
nTPM: 61.8
1875 Female, age 85, both hemispheres 71.2
2364 Male, age 74, right hemisphere 64.3
2329 Male, age 80, right hemisphere 60.0
2020 Male, age 76, both hemispheres 58.2
2561 Female, age 91, both hemispheres 55.4
Superior vestibular nucleus
nTPM: 31.5
2383 Male, age 74, both hemispheres 37.5
2015 Male, age 80, both hemispheres 31.1
2061 Male, age 76, both hemispheres 25.9
Ventral medullary reticular nucleus
nTPM: 37.0
2372 Male, age 61, both hemispheres 38.9
2060 Male, age 76, both hemispheres 35.1
Ventral periolivary nuclei
nTPM: 61.6
2130 Female, age 85, both hemispheres 67.9
2023 Male, age 76, both hemispheres 61.1
2794 Female, age 91, left hemisphere 58.8
2165 Male, age 80, both hemispheres 58.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 43.2
2302 Female, age 91, both hemispheres 47.0
2741 Female, age 85, both hemispheres 45.7
2180 Male, age 61, both hemispheres 45.5
1986 Male, age 76, both hemispheres 43.9
2118 Male, age 80, both hemispheres 33.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 52.0
2449 Male, age 74, both hemispheres 64.9
1959 Male, age 76, both hemispheres 58.2
2840 Female, age 85, both hemispheres 52.6
2456 Female, age 91, both hemispheres 52.3
2161 Male, age 80, both hemispheres 50.2
2359 Male, age 61, both hemispheres 34.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 151.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 67.8
FF:10182-103D2 60 years, female 77.1
FF:10165-103B3 76 years, female 58.6
Medulla oblongata
Scaled Tags Per Million: 64.3
FF:10038-101F2 18-64 years, mixed 81.2
FF:10174-103C3 60 years, female 56.7
FF:10155-103A2 76 years, female 54.9
Pons
Scaled Tags Per Million: 151.4
FF:10033-101E6 18-54 years, mixed 151.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 46.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 46.1
Samples: 4

Max nTPM: 56.1
Min nTPM: 38.7
Sample A Female 56.1
Sample B Female 38.7
Sample C Male 43.2
Sample D Male 46.4
Pons
nTPM: 43.7
Samples: 4

Max nTPM: 53.1
Min nTPM: 32.6
Sample A Female 53.1
Sample B Female 32.6
Sample C Male 38.9
Sample D Male 50.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 25.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 25.3
Samples: 4

Max nTPM: 26.3
Min nTPM: 24.1
Sample A Male 26.3
Sample B Male 24.1
Sample C Female 25.8
Sample D Female 24.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.7
69059954 Antisense, RP_050317_04_G02, Mouse strain C57BL/6J (56 days, male) 6.7
Pons
Expression energy: 5.9
69059954 Antisense, RP_050317_04_G02, Mouse strain C57BL/6J (56 days, male) 5.9

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