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C6orf62
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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:65.9 nTPM
HPA Brain:148.4 nTPM
GTEx:65.9 nTPM
FANTOM5:58.9 Scaled Tags Per Million
Pig:80.4 nTPM
Mouse:83.9 nTPM
Allen mouse:17.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030564Antibody HPA030566
Glial cells MediumLow
Neuronal cells Not detectedHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 123.4
2481 Female, age 94, left hemisphere 169.6
1857 Female, age 85, left hemisphere 128.3
1854 Male, age 80, left hemisphere 127.0
2290 Female, age 72, unknown 121.8
2846 Female, age 79, unknown 117.3
2289 Male, age 61, right hemisphere 110.6
2288 Male, age 75, left hemisphere 108.9
1781 Male, age 74, unknown 103.4
Globus pallidus, externus
nTPM: 148.4
1996 Male, age 80, right hemisphere 165.3
2395 Male, age 75, both hemispheres 152.1
2646 Male, age 61, right hemisphere 151.8
2772 Female, age 79, unknown 138.5
2567 Female, age 72, unknown 134.5
Globus pallidus, internus
nTPM: 143.6
2483 Female, age 94, right hemisphere 195.3
1818 Male, age 74, unknown 154.9
2037 Male, age 80, right hemisphere 154.8
2287 Male, age 75, right hemisphere 128.2
2778 Female, age 91, both hemispheres 127.3
2566 Female, age 72, unknown 125.6
2111 Female, age 85, right hemisphere 118.7
Nucleus accumbens
nTPM: 118.7
2391 Female, age 94, left hemisphere 136.4
1806 Female, age 85, left hemisphere 123.8
2286 Male, age 75, left hemisphere 121.1
2732 Male, age 80, right hemisphere 120.5
1856 Female, age 91, right hemisphere 119.1
2698 Female, age 72, unknown 116.1
1783 Male, age 74, unknown 108.1
2824 Male, age 61, right hemisphere 104.6
Nucleus basalis of Meynert
nTPM: 128.4
2569 Male, age 61, both hemispheres 164.9
2393 Male, age 80, right hemisphere 129.4
2484 Female, age 94, left hemisphere 112.4
2821 Male, age 75, both hemispheres 107.0
Nucleus of the diagonal band
nTPM: 107.9
1979 Male, age 74, unknown 120.7
1812 Female, age 91, both hemispheres 120.0
2775 Male, age 80, right hemisphere 118.2
2195 Female, age 85, both hemispheres 98.1
2029 Male, age 61, right hemisphere 82.5
Putamen
nTPM: 122.6
2482 Female, age 94, left hemisphere 140.5
1937 Female, age 91, right hemisphere 126.5
1829 Male, age 74, unknown 125.5
2647 Male, age 75, left hemisphere 120.4
1838 Male, age 80, right hemisphere 115.8
2466 Female, age 79, unknown 115.8
2489 Female, age 72, unknown 113.5
Septal nuclei
nTPM: 115.6
2199 Male, age 80, right hemisphere 134.5
2394 Male, age 61, left hemisphere 124.3
2031 Female, age 72, unknown 123.7
2009 Female, age 91, both hemispheres 113.0
2059 Female, age 85, both hemispheres 110.2
1960 Male, age 74, unknown 109.2
2629 Female, age 94, right hemisphere 94.2
Stria terminalis, bed nucleus
nTPM: 101.0
1974 Female, age 91, both hemispheres 102.4
2201 Male, age 74, unknown 102.0
2486 Female, age 94, both hemispheres 98.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 64.6
Samples: 246

Max nTPM: 153.5
Min nTPM: 30.4
Std nTPM: 16.5
Median nTPM: 61.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 153.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 120.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 119.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 115.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 113.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 111.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 110.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 109.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 108.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 103.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 102.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 96.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 96.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 94.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 93.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 92.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 91.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 90.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 90.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 89.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 87.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 87.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 86.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 86.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 86.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 83.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 82.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 82.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 82.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 80.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 80.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 80.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 80.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 80.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 80.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 79.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 79.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 79.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 78.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 78.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 78.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 77.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 77.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 76.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 75.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 75.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 75.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 74.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 74.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 74.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 74.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 73.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 73.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 73.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 73.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 73.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 73.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 73.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 73.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 72.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 71.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 70.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 70.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 70.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 70.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 69.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 69.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 69.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 69.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 69.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 68.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 67.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 67.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 67.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 67.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 67.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 67.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 67.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 66.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 66.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 66.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 65.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 65.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 65.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 65.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 65.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 65.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 65.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 65.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 65.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 65.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 64.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 64.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 64.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 64.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 64.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 64.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 64.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 64.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 64.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 64.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 64.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 64.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 64.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 64.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 63.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 63.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 63.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 63.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 63.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 63.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 63.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 62.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 62.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 62.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 62.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 62.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 62.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 61.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 61.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 61.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 61.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 61.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 61.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 61.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 61.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 61.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 60.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 60.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 60.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 60.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 60.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 59.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 59.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 59.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 59.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 59.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 59.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 59.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 59.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 58.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 58.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 58.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 58.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 58.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 58.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 58.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 58.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 58.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 57.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 57.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 57.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 57.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 57.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 57.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 57.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 57.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 57.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 57.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 56.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 56.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 56.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 56.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 56.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 55.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 55.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 55.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 55.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 55.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 55.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 55.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 55.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 55.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 55.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 55.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 55.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 55.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 54.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 54.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 54.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 54.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 54.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 54.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 54.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 53.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 53.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 53.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 53.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 53.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 53.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 53.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 52.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 52.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 52.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 52.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 52.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 51.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 51.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 51.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 51.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 51.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 51.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 51.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 51.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 50.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 50.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 50.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 50.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 49.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 49.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 49.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 49.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 49.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 49.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 49.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 48.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 48.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 48.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 47.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 47.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 47.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 47.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 47.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 47.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 47.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 46.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 46.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 45.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 45.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 45.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 44.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 44.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 44.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 44.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 44.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 44.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 44.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 43.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 40.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 38.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 37.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 34.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 30.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 65.9
Samples: 246

Max nTPM: 131.5
Min nTPM: 34.8
Std nTPM: 15.4
Median nTPM: 62.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 131.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 131.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 129.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 107.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 107.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 107.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 105.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 105.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 102.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 102.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 99.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 98.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 91.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 91.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 91.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 91.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 90.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 89.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 88.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 88.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 86.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 85.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 84.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 84.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 84.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 84.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 84.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 83.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 83.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 83.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 82.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 82.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 82.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 82.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 82.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 81.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 81.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 81.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 79.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 79.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 79.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 78.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 78.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 78.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 77.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 77.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 77.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 77.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 77.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 76.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 75.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 74.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 74.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 74.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 74.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 74.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 74.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 73.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 73.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 73.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 72.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 72.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 72.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 72.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 72.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 72.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 71.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 71.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 71.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 71.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 71.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 71.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 70.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 70.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 70.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 70.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 69.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 69.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 69.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 69.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 69.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 68.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 68.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 67.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 67.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 67.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 67.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 67.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 66.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 66.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 66.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 66.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 66.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 66.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 66.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 66.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 65.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 65.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 65.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 65.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 65.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 65.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 65.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 65.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 65.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 64.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 64.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 64.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 64.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 64.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 64.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 64.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 64.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 63.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 63.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 63.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 63.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 63.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 63.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 63.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 63.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 62.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 62.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 62.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 62.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 62.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 61.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 61.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 61.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 61.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 61.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 61.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 61.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 61.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 61.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 61.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 61.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 61.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 61.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 60.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 60.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 60.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 60.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 60.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 60.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 60.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 59.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 59.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 59.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 59.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 59.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 59.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 59.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 59.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 59.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 58.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 58.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 58.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 58.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 58.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 58.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 58.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 58.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 58.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 58.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 58.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 57.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 57.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 57.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 57.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 57.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 57.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 57.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 57.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 57.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 57.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 56.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 56.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 56.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 56.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 56.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 56.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 56.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 55.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 55.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 55.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 55.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 55.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 55.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 55.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 55.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 55.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 54.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 54.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 54.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 54.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 54.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 53.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 53.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 53.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 53.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 53.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 53.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 53.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 53.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 53.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 53.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 52.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 52.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 52.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 52.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 52.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 52.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 52.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 52.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 51.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 51.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 51.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 51.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 51.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 51.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 51.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 50.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 50.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 50.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 48.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 48.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 48.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 48.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 47.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 47.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 47.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 47.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 47.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 45.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 45.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 45.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 45.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 45.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 44.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 44.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 43.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 42.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 40.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 36.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 34.8
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Brain - Putamen (basal ganglia)
Average nTPM: 62.3
Samples: 205

Max nTPM: 117.4
Min nTPM: 29.5
Std nTPM: 14.3
Median nTPM: 60.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 117.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 107.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 104.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 103.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 103.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 99.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 95.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 94.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 94.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 88.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 87.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 85.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 85.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 85.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 85.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 83.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 83.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 82.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 82.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 81.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 81.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 80.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 79.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 79.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 78.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 77.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 77.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 77.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 76.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 75.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 75.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 75.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 74.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 73.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 73.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 72.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 72.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 72.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 72.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 72.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 72.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 72.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 72.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 72.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 72.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 72.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 71.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 71.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 71.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 71.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 71.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 71.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 71.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 70.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 70.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 70.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 70.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 70.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 70.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 70.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 69.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 69.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 68.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 68.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 68.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 67.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 67.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 66.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 66.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 66.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 66.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 66.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 66.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 65.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 65.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 64.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 64.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 64.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 64.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 64.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 64.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 64.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 64.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 63.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 63.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 63.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 62.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 61.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 61.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 61.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 61.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 61.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 61.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 61.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 61.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 61.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 61.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 60.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 60.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 60.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 60.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 60.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 60.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 60.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 59.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 59.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 59.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 59.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 59.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 58.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 58.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 58.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 58.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 57.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 57.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 57.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 57.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 57.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 56.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 56.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 56.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 56.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 56.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 56.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 56.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 55.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 55.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 55.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 55.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 55.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 55.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 55.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 55.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 54.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 54.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 54.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 54.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 54.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 54.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 54.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 54.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 54.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 54.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 53.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 53.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 53.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 52.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 52.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 52.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 52.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 52.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 52.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 52.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 52.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 52.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 52.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 52.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 51.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 51.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 51.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 51.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 51.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 50.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 50.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 50.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 50.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 50.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 50.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 50.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 50.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 49.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 48.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 48.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 48.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 48.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 47.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 47.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 47.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 47.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 47.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 47.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 46.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 46.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 46.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 46.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 46.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 46.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 45.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 45.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 44.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 44.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 43.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 43.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 42.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 42.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 42.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 42.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 42.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 41.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 39.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 39.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 39.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 38.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 37.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 29.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

58.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 50.8
FF:10164-103B2 76 years, female 50.8
Nucleus accumbens
Scaled Tags Per Million: 45.0
FF:10037-101F1 23-56 years, mixed 45.0
Putamen
Scaled Tags Per Million: 46.9
FF:10176-103C5 60 years, female 46.9
Globus pallidus
Scaled Tags Per Million: 58.9
FF:10161-103A8 76 years, female 59.7
FF:10175-103C4 60 years, female 58.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.4
Pig sample Sample description nTPM
Caudate
nTPM: 70.0
Samples: 4

Max nTPM: 72.3
Min nTPM: 68.2
Sample A Female 68.2
Sample B Female 70.3
Sample C Male 72.3
Sample D Male 69.0
Putamen
nTPM: 80.4
Samples: 4

Max nTPM: 97.5
Min nTPM: 73.0
Sample A Female 74.3
Sample B Female 73.0
Sample C Male 97.5
Sample D Male 76.6
Septum
nTPM: 76.3
Samples: 4

Max nTPM: 80.1
Min nTPM: 74.0
Sample A Female 75.4
Sample B Female 74.0
Sample C Male 80.1
Sample D Male 75.6
Ventral pallidum
nTPM: 74.6
Samples: 4

Max nTPM: 83.8
Min nTPM: 68.5
Sample A Female 68.5
Sample B Female 73.6
Sample C Male 83.8
Sample D Male 72.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 83.9
Samples: 4

Max nTPM: 91.5
Min nTPM: 74.6
Sample A Male 85.6
Sample B Male 74.6
Sample C Female 91.5
Sample D Female 83.9
Septum
nTPM: 70.9
Samples: 4

Max nTPM: 78.7
Min nTPM: 62.4
Sample A Male 62.4
Sample B Male 74.4
Sample C Female 67.9
Sample D Female 78.7
Ventral forebrain
nTPM: 72.7
Samples: 4

Max nTPM: 77.4
Min nTPM: 68.2
Sample A Male 75.0
Sample B Male 68.2
Sample C Female 70.0
Sample D Female 77.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 17.6
275692 Antisense, RP_040617_01_C03, Mouse strain C57BL/6J (56 days, male) 17.6
321201 Antisense, RP_040617_01_C03, Mouse strain C57BL/6J (56 days, male) 13.3
Pallidum
Expression energy: 15.2
275692 Antisense, RP_040617_01_C03, Mouse strain C57BL/6J (56 days, male) 15.2
321201 Antisense, RP_040617_01_C03, Mouse strain C57BL/6J (56 days, male) 9.4

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