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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:59.7 nTPM
HPA Brain:65.2 nTPM
GTEx:59.7 nTPM
FANTOM5:63.8 Scaled Tags Per Million
Pig:31.7 nTPM
Mouse:26.5 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB000116
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 57.4
1781 Male, age 74, unknown 65.4
2846 Female, age 79, unknown 62.8
2481 Female, age 94, left hemisphere 58.0
1857 Female, age 85, left hemisphere 57.7
2290 Female, age 72, unknown 56.7
2289 Male, age 61, right hemisphere 54.7
1854 Male, age 80, left hemisphere 53.8
2288 Male, age 75, left hemisphere 50.0
Globus pallidus, externus
nTPM: 59.7
2646 Male, age 61, right hemisphere 77.3
1996 Male, age 80, right hemisphere 62.7
2567 Female, age 72, unknown 57.3
2772 Female, age 79, unknown 53.5
2395 Male, age 75, both hemispheres 47.7
Globus pallidus, internus
nTPM: 55.3
2483 Female, age 94, right hemisphere 63.8
2566 Female, age 72, unknown 60.4
2037 Male, age 80, right hemisphere 55.8
2778 Female, age 91, both hemispheres 53.7
2287 Male, age 75, right hemisphere 52.5
1818 Male, age 74, unknown 51.9
2111 Female, age 85, right hemisphere 49.1
Nucleus accumbens
nTPM: 57.0
1783 Male, age 74, unknown 66.0
1806 Female, age 85, left hemisphere 61.7
2286 Male, age 75, left hemisphere 59.3
2698 Female, age 72, unknown 59.1
1856 Female, age 91, right hemisphere 55.7
2824 Male, age 61, right hemisphere 54.2
2391 Female, age 94, left hemisphere 50.1
2732 Male, age 80, right hemisphere 49.6
Nucleus basalis of Meynert
nTPM: 60.2
2569 Male, age 61, both hemispheres 89.8
2484 Female, age 94, left hemisphere 54.8
2393 Male, age 80, right hemisphere 48.4
2821 Male, age 75, both hemispheres 47.8
Nucleus of the diagonal band
nTPM: 65.2
2195 Female, age 85, both hemispheres 76.9
2775 Male, age 80, right hemisphere 70.5
1812 Female, age 91, both hemispheres 65.7
2029 Male, age 61, right hemisphere 58.7
1979 Male, age 74, unknown 54.1
Putamen
nTPM: 57.8
2647 Male, age 75, left hemisphere 85.5
2466 Female, age 79, unknown 57.4
1829 Male, age 74, unknown 56.8
2489 Female, age 72, unknown 55.1
2482 Female, age 94, left hemisphere 53.7
1937 Female, age 91, right hemisphere 49.0
1838 Male, age 80, right hemisphere 47.1
Septal nuclei
nTPM: 60.7
1960 Male, age 74, unknown 82.8
2059 Female, age 85, both hemispheres 71.7
2031 Female, age 72, unknown 63.0
2009 Female, age 91, both hemispheres 59.1
2394 Male, age 61, left hemisphere 50.9
2629 Female, age 94, right hemisphere 49.8
2199 Male, age 80, right hemisphere 47.4
Stria terminalis, bed nucleus
nTPM: 54.7
1974 Female, age 91, both hemispheres 63.6
2201 Male, age 74, unknown 51.5
2486 Female, age 94, both hemispheres 49.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 50.1
Samples: 246

Max nTPM: 165.0
Min nTPM: 29.3
Std nTPM: 14.8
Median nTPM: 46.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 165.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 119.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 111.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 93.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 93.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 92.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 79.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 77.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 76.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 76.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 75.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 73.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 72.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 70.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 70.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 70.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 69.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 68.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 68.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 67.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 67.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 67.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 66.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 66.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 66.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 66.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 66.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 64.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 64.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 63.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 63.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 62.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 62.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 62.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 61.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 61.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 61.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 61.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 61.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 61.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 61.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 61.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 60.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 60.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 60.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 60.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 59.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 59.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 59.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 59.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 58.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 58.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 58.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 58.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 57.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 57.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 56.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 56.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 55.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 55.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 55.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 54.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 53.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 53.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 53.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 53.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 53.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 53.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 53.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 53.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 53.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 52.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 52.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 52.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 52.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 52.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 52.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 52.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 52.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 52.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 52.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 52.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 51.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 50.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 50.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 50.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 50.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 50.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 50.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 50.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 50.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 49.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 49.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 49.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 49.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 49.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 49.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 48.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 48.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 48.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 48.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 48.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 48.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 48.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 48.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 48.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 47.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 47.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 47.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 47.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 47.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 47.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 47.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 47.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 47.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 47.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 47.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 47.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 47.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 47.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 46.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 46.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 46.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 46.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 46.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 46.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 46.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 46.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 46.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 46.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 45.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 45.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 45.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 45.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 45.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 45.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 45.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 45.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 45.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 45.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 44.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 44.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 44.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 44.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 44.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 44.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 44.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 44.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 44.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 44.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 44.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 44.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 44.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 44.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 44.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 43.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 43.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 43.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 43.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 43.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 43.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 43.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 42.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 42.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 42.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 42.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 42.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 42.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 42.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 42.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 42.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 42.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 42.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 41.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 41.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 41.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 41.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 41.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 41.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 41.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 41.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 40.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 40.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 40.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 40.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 40.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 40.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 40.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 39.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 39.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 39.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 39.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 39.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 39.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 38.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 38.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 38.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 38.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 38.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 38.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 38.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 38.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 37.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 37.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 37.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 37.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 37.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 37.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 37.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 37.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 37.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 37.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 36.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 36.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 36.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 36.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 36.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 36.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 36.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 35.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 35.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 35.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 35.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 35.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 35.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 35.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 34.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 34.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 34.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 33.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 33.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 33.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 33.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 31.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 31.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 30.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 29.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 29.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 58.7
Samples: 246

Max nTPM: 256.8
Min nTPM: 30.1
Std nTPM: 24.8
Median nTPM: 51.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 256.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 184.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 163.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 135.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 135.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 135.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 126.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 124.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 118.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 110.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 102.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 100.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 99.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 98.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 96.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 96.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 95.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 95.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 94.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 89.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 89.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 86.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 86.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 86.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 84.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 82.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 82.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 79.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 78.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 77.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 77.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 76.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 75.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 75.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 74.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 74.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 73.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 73.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 72.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 70.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 70.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 69.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 69.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 68.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 68.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 67.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 66.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 66.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 66.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 66.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 66.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 66.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 66.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 66.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 66.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 66.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 64.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 64.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 64.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 63.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 63.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 63.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 63.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 63.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 62.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 62.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 61.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 61.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 61.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 60.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 60.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 60.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 60.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 59.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 59.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 59.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 59.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 59.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 58.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 58.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 57.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 57.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 57.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 57.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 56.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 56.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 56.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 56.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 56.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 56.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 55.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 55.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 55.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 55.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 55.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 54.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 54.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 54.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 54.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 54.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 54.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 54.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 53.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 53.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 53.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 53.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 53.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 53.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 53.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 52.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 52.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 52.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 52.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 52.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 52.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 52.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 52.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 52.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 52.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 51.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 51.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 51.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 51.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 51.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 51.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 51.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 51.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 51.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 51.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 51.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 50.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 50.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 50.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 50.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 50.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 50.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 50.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 50.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 50.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 50.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 50.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 50.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 50.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 49.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 49.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 49.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 49.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 49.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 49.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 49.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 49.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 49.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 49.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 49.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 49.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 48.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 48.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 48.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 48.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 48.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 48.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 48.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 48.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 48.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 47.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 47.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 47.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 47.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 47.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 47.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 47.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 47.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 46.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 46.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 46.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 46.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 46.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 46.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 46.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 46.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 46.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 46.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 45.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 45.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 45.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 45.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 45.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 45.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 45.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 44.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 44.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 44.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 44.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 44.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 44.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 44.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 44.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 44.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 44.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 44.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 44.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 43.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 43.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 43.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 43.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 43.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 43.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 43.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 42.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 42.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 42.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 42.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 42.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 42.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 42.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 41.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 41.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 41.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 41.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 41.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 40.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 40.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 40.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 40.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 39.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 39.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 38.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 38.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 38.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 38.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 38.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 37.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 37.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 37.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 36.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 36.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 36.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 36.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 36.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 35.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 33.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 32.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 32.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 31.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 30.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 30.1
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Brain - Putamen (basal ganglia)
Average nTPM: 59.7
Samples: 205

Max nTPM: 209.9
Min nTPM: 31.4
Std nTPM: 21.9
Median nTPM: 53.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 209.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 139.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 133.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 126.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 123.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 109.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 107.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 104.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 103.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 101.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 100.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 99.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 96.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 92.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 91.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 91.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 91.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 90.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 90.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 89.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 89.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 88.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 88.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 84.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 83.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 82.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 82.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 82.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 81.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 80.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 78.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 76.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 76.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 76.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 75.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 75.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 74.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 73.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 72.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 72.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 72.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 72.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 71.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 71.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 71.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 71.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 70.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 69.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 69.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 68.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 67.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 66.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 66.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 66.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 63.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 62.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 62.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 62.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 62.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 62.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 62.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 61.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 60.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 60.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 60.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 60.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 59.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 59.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 59.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 59.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 58.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 58.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 58.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 58.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 58.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 58.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 58.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 58.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 58.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 57.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 57.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 57.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 57.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 56.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 56.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 56.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 55.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 55.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 55.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 55.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 55.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 54.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 54.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 54.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 54.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 54.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 54.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 54.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 53.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 53.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 53.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 53.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 53.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 53.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 53.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 53.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 53.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 53.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 53.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 53.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 53.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 52.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 52.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 52.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 52.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 52.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 51.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 51.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 50.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 50.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 50.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 50.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 50.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 50.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 49.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 49.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 49.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 49.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 49.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 49.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 49.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 48.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 48.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 48.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 48.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 48.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 48.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 48.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 48.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 47.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 47.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 47.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 47.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 47.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 47.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 46.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 46.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 46.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 46.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 46.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 46.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 45.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 45.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 45.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 44.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 44.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 44.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 44.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 44.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 44.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 44.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 44.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 44.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 44.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 44.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 44.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 44.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 43.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 43.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 43.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 43.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 43.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 43.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 42.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 42.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 42.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 42.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 41.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 41.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 41.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 41.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 41.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 41.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 41.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 40.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 40.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 40.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 40.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 40.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 40.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 40.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 39.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 39.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 39.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 38.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 38.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 38.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 38.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 38.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 38.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 37.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 35.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 33.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 31.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

63.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 56.5
FF:10164-103B2 76 years, female 56.5
Nucleus accumbens
Scaled Tags Per Million: 63.8
FF:10037-101F1 23-56 years, mixed 63.8
Putamen
Scaled Tags Per Million: 54.9
FF:10176-103C5 60 years, female 54.9
Globus pallidus
Scaled Tags Per Million: 43.3
FF:10161-103A8 76 years, female 44.3
FF:10175-103C4 60 years, female 42.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.7
Pig sample Sample description nTPM
Caudate
nTPM: 24.4
Samples: 4

Max nTPM: 27.4
Min nTPM: 22.2
Sample A Female 22.2
Sample B Female 27.4
Sample C Male 25.6
Sample D Male 22.3
Putamen
nTPM: 31.7
Samples: 4

Max nTPM: 39.1
Min nTPM: 24.2
Sample A Female 39.1
Sample B Female 24.2
Sample C Male 31.2
Sample D Male 32.3
Septum
nTPM: 28.7
Samples: 4

Max nTPM: 31.4
Min nTPM: 25.2
Sample A Female 29.7
Sample B Female 25.2
Sample C Male 31.4
Sample D Male 28.3
Ventral pallidum
nTPM: 31.2
Samples: 4

Max nTPM: 40.8
Min nTPM: 22.5
Sample A Female 22.5
Sample B Female 29.3
Sample C Male 40.8
Sample D Male 32.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 20.2
Samples: 4

Max nTPM: 22.3
Min nTPM: 15.9
Sample A Male 22.3
Sample B Male 21.8
Sample C Female 15.9
Sample D Female 20.7
Septum
nTPM: 26.6
Samples: 4

Max nTPM: 28.4
Min nTPM: 23.3
Sample A Male 23.3
Sample B Male 27.5
Sample C Female 28.4
Sample D Female 27.0
Ventral forebrain
nTPM: 21.3
Samples: 4

Max nTPM: 27.5
Min nTPM: 18.4
Sample A Male 18.4
Sample B Male 19.8
Sample C Female 27.5
Sample D Female 19.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
68191468 Antisense, RP_041129_01_C04, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.0
68191468 Antisense, RP_041129_01_C04, Mouse strain C57BL/6J (56 days, male) 0.0

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