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TMEM30A
HPA
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  • TMEM30A
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TMEM30A
Synonyms C6orf67, CDC50A, FLJ10856
Gene descriptioni

Full gene name according to HGNC.

Transmembrane protein 30A
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband q14.1
Chromosome location (bp) 75252924 - 75284948
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000112697 (version 109)
Entrez gene 55754
HGNC HGNC:16667
UniProt Q9NV96 (UniProt - Evidence at protein level)
neXtProt NX_Q9NV96
GeneCards TMEM30A
Antibodypedia TMEM30A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Accessory component of a P4-ATPase flippase complex which catalyzes the hydrolysis of ATP coupled to the transport of aminophospholipids from the outer to the inner leaflet of various membranes and ensures the maintenance of asymmetric distribution of phospholipids. Phospholipid translocation seems also to be implicated in vesicle formation and in uptake of lipid signaling molecules. The beta subunit may assist in binding of the phospholipid substrate. Required for the proper folding, assembly and ER to Golgi exit of the ATP8A2:TMEM30A flippase complex. ATP8A2:TMEM30A may be involved in regulation of neurite outgrowth, and, reconstituted to liposomes, predomiminantly transports phosphatidylserine (PS) and to a lesser extent phosphatidylethanolamine (PE). The ATP8A1:TMEM30A flippase complex seems to play a role in regulation of cell migration probably involving flippase-mediated translocation of phosphatidylethanolamine (PE) at the plasma membrane. Required for the formation of the ATP8A2, ATP8B1 and ATP8B2 P-type ATPAse intermediate phosphoenzymes. Involved in uptake of platelet-activating factor (PAF), synthetic drug alkylphospholipid edelfosine, and, probably in association with ATP8B1, of perifosine. Also mediates the export of alpha subunits ATP8A1, ATP8B1, ATP8B2, ATP8B4, ATP10A, ATP10B, ATP10D, ATP11A, ATP11B and ATP11C from the ER to other membrane localizations.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables aminophospholipid flippase activity. Involved in several processes, including phospholipid transport; positive regulation of transport; and xenobiotic transmembrane transport. Located in endoplasmic reticulum and plasma membrane. Part of phospholipid-translocating ATPase complex. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TMEM30A-201
ENSP00000230461
ENST00000230461
Q9NV96
[Direct mapping] Cell cycle control protein 50A
Show all
Transporters
   Transporter channels and pores
   Accessory Factors Involved in Transport
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005198 [structural molecule activity]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0006855 [xenobiotic transmembrane transport]
GO:0006869 [lipid transport]
GO:0010976 [positive regulation of neuron projection development]
GO:0015247 [aminophospholipid flippase activity]
GO:0015914 [phospholipid transport]
GO:0015917 [aminophospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016324 [apical plasma membrane]
GO:0030658 [transport vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031901 [early endosome membrane]
GO:0031902 [late endosome membrane]
GO:0033036 [macromolecule localization]
GO:0035577 [azurophil granule membrane]
GO:0035579 [specific granule membrane]
GO:0036010 [protein localization to endosome]
GO:0045332 [phospholipid translocation]
GO:0061092 [positive regulation of phospholipid translocation]
GO:0070863 [positive regulation of protein exit from endoplasmic reticulum]
GO:0140331 [aminophospholipid translocation]
GO:1990531 [phospholipid-translocating ATPase complex]
Show all
361 aa
40.7 kDa
No 2
TMEM30A-202
ENSP00000359067
ENST00000370050
Q9NV96
[Direct mapping] Cell cycle control protein 50A
Show all
Transporters
   Transporter channels and pores
   Accessory Factors Involved in Transport
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005198 [structural molecule activity]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0006855 [xenobiotic transmembrane transport]
GO:0006869 [lipid transport]
GO:0015247 [aminophospholipid flippase activity]
GO:0015914 [phospholipid transport]
GO:0015917 [aminophospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016324 [apical plasma membrane]
GO:0030658 [transport vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031901 [early endosome membrane]
GO:0031902 [late endosome membrane]
GO:0033036 [macromolecule localization]
GO:0035577 [azurophil granule membrane]
GO:0035579 [specific granule membrane]
GO:0036010 [protein localization to endosome]
GO:0045332 [phospholipid translocation]
GO:0061092 [positive regulation of phospholipid translocation]
GO:0070863 [positive regulation of protein exit from endoplasmic reticulum]
GO:0140331 [aminophospholipid translocation]
GO:1990531 [phospholipid-translocating ATPase complex]
Show all
242 aa
27.7 kDa
No 1
TMEM30A-203
ENSP00000431007
ENST00000475111
Q9NV96
[Direct mapping] Cell cycle control protein 50A
Show all
Transporters
   Transporter channels and pores
   Accessory Factors Involved in Transport
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005198 [structural molecule activity]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0006855 [xenobiotic transmembrane transport]
GO:0006869 [lipid transport]
GO:0015247 [aminophospholipid flippase activity]
GO:0015914 [phospholipid transport]
GO:0015917 [aminophospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016324 [apical plasma membrane]
GO:0030658 [transport vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031901 [early endosome membrane]
GO:0031902 [late endosome membrane]
GO:0033036 [macromolecule localization]
GO:0035577 [azurophil granule membrane]
GO:0035579 [specific granule membrane]
GO:0036010 [protein localization to endosome]
GO:0045332 [phospholipid translocation]
GO:0061092 [positive regulation of phospholipid translocation]
GO:0070863 [positive regulation of protein exit from endoplasmic reticulum]
GO:0140331 [aminophospholipid translocation]
GO:1990531 [phospholipid-translocating ATPase complex]
Show all
325 aa
36.7 kDa
No 2
TMEM30A-204
ENSP00000430270
ENST00000518161
E5RG19
[Direct mapping] Cell cycle control protein 50A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0015914 [phospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030658 [transport vesicle membrane]
GO:0033036 [macromolecule localization]
Show all
77 aa
8.8 kDa
No 0
TMEM30A-205
ENSP00000501250
ENST00000673730
A0A669KBF5
[Direct mapping] Cell cycle control protein
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0015914 [phospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030658 [transport vesicle membrane]
GO:0033036 [macromolecule localization]
Show all
289 aa
32.5 kDa
No 2
TMEM30A-207
ENSP00000501237
ENST00000674038
A0A669KBE6
[Direct mapping] Cell cycle control protein
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0015914 [phospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030658 [transport vesicle membrane]
GO:0033036 [macromolecule localization]
Show all
325 aa
36.5 kDa
No 2
TMEM30A-209
ENSP00000500998
ENST00000674151
Q9NV96
[Direct mapping] Cell cycle control protein 50A
Show all
Transporters
   Transporter channels and pores
   Accessory Factors Involved in Transport
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005198 [structural molecule activity]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0006855 [xenobiotic transmembrane transport]
GO:0006869 [lipid transport]
GO:0015247 [aminophospholipid flippase activity]
GO:0015914 [phospholipid transport]
GO:0015917 [aminophospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016324 [apical plasma membrane]
GO:0030658 [transport vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031901 [early endosome membrane]
GO:0031902 [late endosome membrane]
GO:0033036 [macromolecule localization]
GO:0035577 [azurophil granule membrane]
GO:0035579 [specific granule membrane]
GO:0036010 [protein localization to endosome]
GO:0045332 [phospholipid translocation]
GO:0061092 [positive regulation of phospholipid translocation]
GO:0070863 [positive regulation of protein exit from endoplasmic reticulum]
GO:0140331 [aminophospholipid translocation]
GO:1990531 [phospholipid-translocating ATPase complex]
Show all
242 aa
27.7 kDa
No 1

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