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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:36.7 nTPM
HPA Brain:28.9 nTPM
GTEx:36.7 nTPM
FANTOM5:78.8 Scaled Tags Per Million
Pig:21.2 nTPM
Mouse:8.8 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029456
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 26.5
1857 Female, age 85, left hemisphere 31.4
2290 Female, age 72, unknown 31.2
1854 Male, age 80, left hemisphere 29.2
2481 Female, age 94, left hemisphere 27.9
2846 Female, age 79, unknown 27.5
1781 Male, age 74, unknown 23.8
2289 Male, age 61, right hemisphere 22.3
2288 Male, age 75, left hemisphere 18.4
Globus pallidus, externus
nTPM: 26.5
2646 Male, age 61, right hemisphere 33.2
1996 Male, age 80, right hemisphere 28.3
2772 Female, age 79, unknown 24.2
2567 Female, age 72, unknown 24.0
2395 Male, age 75, both hemispheres 22.8
Globus pallidus, internus
nTPM: 23.6
2483 Female, age 94, right hemisphere 30.0
2037 Male, age 80, right hemisphere 24.9
1818 Male, age 74, unknown 24.1
2566 Female, age 72, unknown 23.0
2287 Male, age 75, right hemisphere 21.9
2111 Female, age 85, right hemisphere 21.2
2778 Female, age 91, both hemispheres 20.3
Nucleus accumbens
nTPM: 24.2
1806 Female, age 85, left hemisphere 28.6
2732 Male, age 80, right hemisphere 26.7
2698 Female, age 72, unknown 26.3
1783 Male, age 74, unknown 25.2
1856 Female, age 91, right hemisphere 24.0
2824 Male, age 61, right hemisphere 22.1
2286 Male, age 75, left hemisphere 21.5
2391 Female, age 94, left hemisphere 18.8
Nucleus basalis of Meynert
nTPM: 28.9
2569 Male, age 61, both hemispheres 40.9
2484 Female, age 94, left hemisphere 26.4
2393 Male, age 80, right hemisphere 24.7
2821 Male, age 75, both hemispheres 23.4
Nucleus of the diagonal band
nTPM: 23.3
2195 Female, age 85, both hemispheres 28.4
2775 Male, age 80, right hemisphere 23.7
1979 Male, age 74, unknown 22.4
1812 Female, age 91, both hemispheres 22.2
2029 Male, age 61, right hemisphere 19.7
Putamen
nTPM: 26.1
2489 Female, age 72, unknown 32.2
2482 Female, age 94, left hemisphere 29.7
2647 Male, age 75, left hemisphere 25.5
2466 Female, age 79, unknown 25.4
1838 Male, age 80, right hemisphere 24.6
1829 Male, age 74, unknown 23.3
1937 Female, age 91, right hemisphere 22.1
Septal nuclei
nTPM: 24.9
2059 Female, age 85, both hemispheres 31.5
1960 Male, age 74, unknown 28.3
2199 Male, age 80, right hemisphere 25.4
2394 Male, age 61, left hemisphere 23.7
2629 Female, age 94, right hemisphere 22.5
2031 Female, age 72, unknown 21.8
2009 Female, age 91, both hemispheres 21.4
Stria terminalis, bed nucleus
nTPM: 20.2
1974 Female, age 91, both hemispheres 24.2
2486 Female, age 94, both hemispheres 18.7
2201 Male, age 74, unknown 17.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 35.7
Samples: 246

Max nTPM: 67.0
Min nTPM: 18.8
Std nTPM: 7.8
Median nTPM: 34.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 67.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 63.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 62.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 60.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 55.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 54.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 54.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 53.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 53.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 51.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 51.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 50.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 50.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 50.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 49.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 49.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 49.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 48.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 48.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 47.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 47.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 47.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 47.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 47.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 46.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 46.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 46.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 46.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 45.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 45.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 45.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 45.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 44.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 43.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 43.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 43.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 43.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 43.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 42.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 42.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 42.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 42.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 42.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 42.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 42.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 42.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 42.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 41.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 41.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 41.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 41.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 41.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 40.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 40.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 40.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 40.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 40.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 40.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 40.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 40.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 40.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 39.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 39.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 39.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 39.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 39.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 39.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 39.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 39.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 38.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 38.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 38.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 38.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 38.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 38.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 38.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 38.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 38.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 37.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 37.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 37.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 37.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 37.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 37.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 37.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 37.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 36.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 36.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 36.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 36.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 36.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 36.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 36.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 36.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 36.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 36.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 36.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 36.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 36.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 36.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 35.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 35.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 35.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 35.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 35.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 35.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 35.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 35.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 35.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 35.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 35.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 34.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 34.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 34.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 34.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 34.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 34.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 34.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 34.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 34.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 34.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 34.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 34.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 34.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 34.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 34.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 33.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 33.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 33.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 33.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 33.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 33.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 33.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 33.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 33.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 33.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 33.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 33.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 33.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 33.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 33.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 33.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 33.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 33.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 33.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 32.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 32.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 32.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 32.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 32.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 32.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 32.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 32.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 32.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 32.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 32.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 32.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 32.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 32.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 32.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 32.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 32.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 31.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 31.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 31.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 31.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 31.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 31.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 31.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 31.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 31.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 31.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 30.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 30.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 30.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 30.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 30.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 30.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 30.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 30.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 30.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 30.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 30.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 30.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 30.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 30.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 30.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 30.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 30.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 29.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 29.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 29.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 29.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 29.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 29.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 29.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 29.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 29.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 29.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 29.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 29.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 29.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 29.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 29.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 29.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 29.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 29.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 28.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 28.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 28.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 28.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 28.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 28.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 28.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 28.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 27.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 27.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 27.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 27.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 27.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 27.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 27.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 27.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 27.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 27.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 27.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 27.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 27.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 27.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 26.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 26.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 26.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 25.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 25.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 25.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 25.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 24.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 24.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 23.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 23.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 21.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 21.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 21.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 19.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 18.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 36.7
Samples: 246

Max nTPM: 80.3
Min nTPM: 19.4
Std nTPM: 10.3
Median nTPM: 33.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 80.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 77.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 76.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 69.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 68.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 63.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 63.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 60.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 60.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 57.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 57.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 57.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 57.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 57.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 57.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 57.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 54.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 54.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 53.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 53.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 53.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 53.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 53.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 53.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 52.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 51.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 51.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 51.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 50.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 50.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 50.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 49.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 49.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 49.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 48.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 48.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 46.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 46.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 45.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 45.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 45.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 45.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 44.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 44.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 44.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 43.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 43.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 43.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 42.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 42.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 41.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 41.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 41.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 41.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 41.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 40.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 40.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 40.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 40.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 40.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 40.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 40.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 40.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 39.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 39.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 39.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 39.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 39.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 39.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 39.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 39.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 39.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 39.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 39.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 39.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 39.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 38.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 38.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 38.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 38.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 38.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 38.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 38.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 37.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 37.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 37.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 37.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 37.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 37.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 37.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 37.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 37.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 37.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 36.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 36.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 36.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 36.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 36.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 36.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 36.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 35.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 35.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 35.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 35.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 35.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 35.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 35.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 35.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 35.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 34.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 34.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 34.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 34.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 34.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 34.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 34.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 34.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 34.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 34.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 33.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 33.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 33.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 33.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 33.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 33.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 33.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 33.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 33.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 33.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 33.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 33.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 32.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 32.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 32.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 32.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 32.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 32.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 32.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 32.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 32.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 32.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 32.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 32.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 32.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 32.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 32.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 32.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 32.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 31.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 31.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 31.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 31.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 31.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 31.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 31.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 31.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 31.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 31.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 31.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 31.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 31.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 31.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 31.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 31.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 31.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 31.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 30.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 30.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 30.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 30.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 30.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 30.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 30.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 30.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 30.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 30.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 30.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 30.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 30.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 30.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 29.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 29.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 29.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 29.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 29.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 29.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 29.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 29.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 29.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 29.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 29.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 29.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 29.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 29.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 28.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 28.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 28.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 28.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 28.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 28.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 28.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 28.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 28.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 28.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 28.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 28.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 28.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 28.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 27.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 27.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 27.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 27.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 27.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 27.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 27.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 27.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 27.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 27.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 27.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 27.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 27.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 26.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 26.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 26.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 26.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 26.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 26.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 26.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 26.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 26.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 26.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 26.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 25.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 25.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 25.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 25.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 25.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 25.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 25.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 25.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 24.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 22.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 22.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 21.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 21.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 19.4
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Brain - Putamen (basal ganglia)
Average nTPM: 35.8
Samples: 205

Max nTPM: 93.8
Min nTPM: 20.9
Std nTPM: 9.5
Median nTPM: 33.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 93.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 69.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 68.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 67.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 65.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 64.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 59.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 59.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 58.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 55.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 53.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 52.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 51.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 50.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 49.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 48.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 48.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 47.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 45.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 45.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 45.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 44.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 44.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 44.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 44.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 44.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 43.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 43.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 43.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 43.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 43.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 43.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 42.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 42.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 42.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 41.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 41.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 41.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 41.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 41.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 41.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 41.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 40.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 40.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 40.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 40.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 40.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 40.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 40.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 39.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 39.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 39.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 39.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 39.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 38.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 38.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 38.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 38.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 38.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 38.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 38.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 38.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 37.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 37.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 37.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 37.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 37.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 37.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 37.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 36.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 36.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 36.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 36.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 36.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 36.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 36.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 36.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 35.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 35.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 35.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 35.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 35.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 35.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 34.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 34.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 34.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 34.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 34.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 34.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 34.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 34.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 34.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 34.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 33.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 33.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 33.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 33.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 33.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 33.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 33.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 33.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 33.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 33.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 33.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 33.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 32.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 32.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 32.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 32.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 32.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 32.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 32.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 32.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 32.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 32.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 32.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 32.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 32.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 32.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 32.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 32.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 32.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 32.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 32.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 32.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 32.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 32.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 32.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 32.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 32.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 31.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 31.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 31.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 31.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 31.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 31.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 31.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 31.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 31.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 31.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 31.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 30.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 30.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 30.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 30.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 30.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 30.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 30.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 30.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 30.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 30.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 30.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 30.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 30.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 29.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 29.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 29.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 29.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 29.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 29.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 28.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 28.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 28.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 28.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 28.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 28.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 28.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 28.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 28.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 28.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 28.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 28.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 28.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 28.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 28.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 28.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 28.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 28.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 27.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 27.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 27.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 27.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 27.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 26.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 26.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 26.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 26.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 26.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 26.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 26.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 26.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 25.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 25.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 25.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 25.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 25.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 25.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 25.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 25.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 24.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 24.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 24.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 23.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 21.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 20.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

78.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 78.8
FF:10164-103B2 76 years, female 78.8
Nucleus accumbens
Scaled Tags Per Million: 67.4
FF:10037-101F1 23-56 years, mixed 67.4
Putamen
Scaled Tags Per Million: 67.2
FF:10176-103C5 60 years, female 67.2
Globus pallidus
Scaled Tags Per Million: 64.0
FF:10161-103A8 76 years, female 70.8
FF:10175-103C4 60 years, female 57.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.2
Pig sample Sample description nTPM
Caudate
nTPM: 19.4
Samples: 4

Max nTPM: 22.3
Min nTPM: 16.6
Sample A Female 17.4
Sample B Female 21.1
Sample C Male 22.3
Sample D Male 16.6
Putamen
nTPM: 20.8
Samples: 4

Max nTPM: 23.2
Min nTPM: 17.6
Sample A Female 21.6
Sample B Female 17.6
Sample C Male 23.2
Sample D Male 20.7
Septum
nTPM: 21.2
Samples: 4

Max nTPM: 26.5
Min nTPM: 17.8
Sample A Female 21.6
Sample B Female 19.0
Sample C Male 26.5
Sample D Male 17.8
Ventral pallidum
nTPM: 18.8
Samples: 4

Max nTPM: 21.0
Min nTPM: 16.2
Sample A Female 16.2
Sample B Female 21.0
Sample C Male 20.3
Sample D Male 17.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 8.8
Samples: 4

Max nTPM: 10.6
Min nTPM: 7.4
Sample A Male 10.6
Sample B Male 8.8
Sample C Female 7.4
Sample D Female 8.4
Septum
nTPM: 8.7
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.0
Sample A Male 10.0
Sample B Male 8.0
Sample C Female 8.1
Sample D Female 8.6
Ventral forebrain
nTPM: 7.6
Samples: 4

Max nTPM: 9.5
Min nTPM: 5.2
Sample A Male 7.1
Sample B Male 8.7
Sample C Female 9.5
Sample D Female 5.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
79393541 Antisense, RP_071018_02_B05, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
79393541 Antisense, RP_071018_02_B05, Mouse strain C57BL/6J (56 days, male) 0.0

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