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  • CSNK1A1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:42.9 nTPM
HPA Brain:123.9 nTPM
GTEx:42.9 nTPM
FANTOM5:79.0 Scaled Tags Per Million
Pig:88.2 nTPM
Mouse:169.6 nTPM
Allen mouse:10.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB016680
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 112.5
2481 Female, age 94, left hemisphere 137.4
2288 Male, age 75, left hemisphere 114.8
2290 Female, age 72, unknown 111.4
1781 Male, age 74, unknown 110.6
2289 Male, age 61, right hemisphere 109.6
2846 Female, age 79, unknown 108.6
1854 Male, age 80, left hemisphere 107.0
1857 Female, age 85, left hemisphere 100.7
Globus pallidus, externus
nTPM: 117.7
2772 Female, age 79, unknown 135.7
2646 Male, age 61, right hemisphere 123.8
1996 Male, age 80, right hemisphere 116.6
2395 Male, age 75, both hemispheres 107.2
2567 Female, age 72, unknown 105.2
Globus pallidus, internus
nTPM: 123.9
2483 Female, age 94, right hemisphere 148.1
2287 Male, age 75, right hemisphere 138.2
2111 Female, age 85, right hemisphere 124.6
1818 Male, age 74, unknown 123.3
2778 Female, age 91, both hemispheres 119.3
2037 Male, age 80, right hemisphere 115.0
2566 Female, age 72, unknown 99.1
Nucleus accumbens
nTPM: 114.3
2286 Male, age 75, left hemisphere 123.0
2732 Male, age 80, right hemisphere 120.1
2391 Female, age 94, left hemisphere 118.4
1783 Male, age 74, unknown 117.3
2698 Female, age 72, unknown 113.3
1806 Female, age 85, left hemisphere 111.8
1856 Female, age 91, right hemisphere 108.8
2824 Male, age 61, right hemisphere 101.4
Nucleus basalis of Meynert
nTPM: 112.7
2484 Female, age 94, left hemisphere 121.3
2821 Male, age 75, both hemispheres 113.0
2569 Male, age 61, both hemispheres 112.4
2393 Male, age 80, right hemisphere 103.9
Nucleus of the diagonal band
nTPM: 102.9
1812 Female, age 91, both hemispheres 117.5
1979 Male, age 74, unknown 109.8
2775 Male, age 80, right hemisphere 103.8
2195 Female, age 85, both hemispheres 97.5
2029 Male, age 61, right hemisphere 86.1
Putamen
nTPM: 111.0
2482 Female, age 94, left hemisphere 134.4
2466 Female, age 79, unknown 113.6
1937 Female, age 91, right hemisphere 113.4
1838 Male, age 80, right hemisphere 111.5
2647 Male, age 75, left hemisphere 108.6
1829 Male, age 74, unknown 101.7
2489 Female, age 72, unknown 93.8
Septal nuclei
nTPM: 102.0
2199 Male, age 80, right hemisphere 112.1
2031 Female, age 72, unknown 108.9
2394 Male, age 61, left hemisphere 102.7
1960 Male, age 74, unknown 101.3
2059 Female, age 85, both hemispheres 99.5
2009 Female, age 91, both hemispheres 98.8
2629 Female, age 94, right hemisphere 90.7
Stria terminalis, bed nucleus
nTPM: 100.5
1974 Female, age 91, both hemispheres 107.3
2486 Female, age 94, both hemispheres 98.1
2201 Male, age 74, unknown 96.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 42.2
Samples: 246

Max nTPM: 63.7
Min nTPM: 32.7
Std nTPM: 5.8
Median nTPM: 40.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 63.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 63.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 63.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 61.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 58.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 57.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 56.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 56.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 55.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 55.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 54.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 53.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 53.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 53.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 53.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 52.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 52.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 52.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 51.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 51.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 51.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 50.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 50.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 50.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 49.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 49.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 49.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 49.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 49.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 48.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 48.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 48.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 47.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 47.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 47.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 47.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 47.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 46.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 46.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 46.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 46.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 46.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 46.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 46.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 46.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 46.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 45.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 45.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 45.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 45.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 45.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 45.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 45.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 45.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 45.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 45.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 45.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 45.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 45.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 44.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 44.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 44.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 44.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 44.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 44.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 44.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 44.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 44.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 44.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 44.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 44.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 44.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 44.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 44.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 44.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 43.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 43.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 43.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 43.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 43.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 43.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 43.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 43.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 43.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 43.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 43.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 43.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 43.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 42.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 42.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 42.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 42.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 42.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 42.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 42.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 42.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 42.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 42.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 42.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 42.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 42.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 41.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 41.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 41.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 41.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 41.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 41.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 41.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 41.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 41.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 41.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 41.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 41.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 41.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 41.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 41.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 41.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 40.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 40.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 40.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 40.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 40.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 40.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 40.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 40.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 40.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 40.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 40.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 40.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 40.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 40.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 40.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 40.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 40.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 40.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 40.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 40.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 39.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 39.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 39.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 39.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 39.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 39.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 39.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 39.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 39.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 39.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 39.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 39.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 39.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 39.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 39.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 39.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 39.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 39.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 39.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 39.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 39.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 39.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 39.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 39.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 39.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 38.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 38.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 38.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 38.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 38.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 38.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 38.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 38.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 38.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 38.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 38.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 38.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 38.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 38.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 38.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 38.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 37.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 37.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 37.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 37.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 37.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 37.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 37.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 37.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 37.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 37.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 37.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 37.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 37.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 37.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 37.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 37.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 37.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 37.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 37.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 36.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 36.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 36.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 36.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 36.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 36.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 36.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 36.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 36.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 36.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 36.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 36.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 36.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 36.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 36.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 36.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 36.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 35.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 35.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 35.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 35.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 35.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 35.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 35.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 35.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 35.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 35.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 35.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 34.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 34.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 34.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 34.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 34.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 34.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 34.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 34.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 33.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 33.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 33.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 32.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 32.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 42.3
Samples: 246

Max nTPM: 72.2
Min nTPM: 30.1
Std nTPM: 6.5
Median nTPM: 41.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 72.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 70.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 63.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 61.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 60.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 58.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 57.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 57.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 57.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 57.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 56.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 55.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 55.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 55.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 54.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 54.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 54.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 54.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 53.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 53.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 51.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 50.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 50.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 50.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 50.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 49.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 49.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 49.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 49.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 49.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 49.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 48.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 48.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 48.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 48.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 48.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 48.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 48.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 47.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 47.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 47.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 47.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 46.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 46.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 46.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 46.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 46.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 46.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 46.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 45.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 45.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 45.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 45.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 45.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 45.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 45.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 45.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 45.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 45.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 44.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 44.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 44.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 44.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 44.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 44.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 44.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 44.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 44.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 43.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 43.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 43.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 43.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 43.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 43.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 43.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 43.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 43.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 43.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 43.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 43.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 43.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 43.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 43.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 43.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 43.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 43.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 43.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 42.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 42.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 42.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 42.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 42.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 42.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 42.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 42.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 42.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 42.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 42.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 42.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 42.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 42.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 42.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 42.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 42.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 42.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 42.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 42.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 42.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 42.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 42.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 42.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 42.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 42.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 42.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 42.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 41.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 41.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 41.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 41.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 41.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 41.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 41.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 41.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 41.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 41.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 41.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 41.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 41.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 41.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 40.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 40.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 40.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 40.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 40.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 40.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 40.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 40.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 40.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 40.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 40.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 40.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 40.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 40.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 40.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 40.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 40.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 40.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 39.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 39.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 39.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 39.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 39.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 39.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 39.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 39.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 39.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 39.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 39.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 39.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 39.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 39.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 39.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 39.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 39.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 39.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 38.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 38.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 38.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 38.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 38.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 38.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 38.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 38.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 38.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 38.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 38.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 38.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 38.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 38.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 37.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 37.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 37.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 37.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 37.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 37.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 37.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 37.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 37.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 37.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 37.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 37.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 37.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 37.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 37.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 37.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 37.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 37.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 37.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 37.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 37.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 36.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 36.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 36.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 36.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 36.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 36.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 36.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 36.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 36.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 36.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 36.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 36.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 36.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 36.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 36.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 36.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 36.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 35.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 35.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 35.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 35.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 35.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 35.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 35.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 35.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 35.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 35.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 35.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 34.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 34.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 34.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 34.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 34.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 34.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 34.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 33.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 33.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 33.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 33.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 33.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 33.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 32.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 31.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 31.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 31.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 30.1
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Brain - Putamen (basal ganglia)
Average nTPM: 42.9
Samples: 205

Max nTPM: 70.7
Min nTPM: 31.7
Std nTPM: 6.2
Median nTPM: 42.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 70.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 66.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 63.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 59.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 58.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 57.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 56.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 55.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 55.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 54.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 54.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 53.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 53.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 53.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 53.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 52.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 52.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 52.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 51.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 51.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 51.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 50.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 50.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 50.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 50.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 50.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 50.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 50.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 49.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 49.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 49.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 49.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 49.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 49.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 48.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 48.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 48.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 47.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 47.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 47.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 47.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 47.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 47.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 46.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 46.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 46.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 46.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 46.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 45.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 45.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 45.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 45.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 45.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 45.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 45.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 45.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 45.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 45.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 45.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 44.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 44.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 44.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 44.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 44.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 44.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 44.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 43.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 43.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 43.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 43.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 43.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 43.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 43.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 43.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 43.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 43.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 43.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 43.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 43.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 43.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 43.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 43.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 43.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 43.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 42.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 42.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 42.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 42.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 42.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 42.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 42.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 42.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 42.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 42.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 42.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 42.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 42.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 42.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 42.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 42.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 42.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 42.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 42.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 42.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 42.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 42.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 41.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 41.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 41.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 41.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 41.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 41.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 41.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 41.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 41.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 41.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 41.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 41.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 40.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 40.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 40.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 40.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 40.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 40.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 40.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 40.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 40.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 40.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 40.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 40.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 39.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 39.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 39.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 39.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 39.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 39.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 39.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 39.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 39.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 39.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 39.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 39.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 39.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 39.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 39.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 38.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 38.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 38.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 38.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 38.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 38.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 38.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 38.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 38.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 38.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 38.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 38.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 37.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 37.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 37.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 37.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 37.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 37.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 37.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 37.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 37.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 37.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 37.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 37.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 37.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 37.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 37.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 37.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 37.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 37.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 37.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 37.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 37.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 36.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 36.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 36.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 36.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 36.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 36.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 36.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 36.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 35.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 35.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 35.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 35.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 35.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 35.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 35.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 35.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 35.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 35.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 34.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 34.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 34.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 34.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 34.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 33.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 33.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 33.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 31.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

79.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 63.8
FF:10164-103B2 76 years, female 63.8
Nucleus accumbens
Scaled Tags Per Million: 71.9
FF:10037-101F1 23-56 years, mixed 71.9
Putamen
Scaled Tags Per Million: 79.0
FF:10176-103C5 60 years, female 79.0
Globus pallidus
Scaled Tags Per Million: 63.0
FF:10161-103A8 76 years, female 64.9
FF:10175-103C4 60 years, female 61.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.2
Pig sample Sample description nTPM
Caudate
nTPM: 71.7
Samples: 4

Max nTPM: 74.5
Min nTPM: 68.0
Sample A Female 71.3
Sample B Female 73.1
Sample C Male 74.5
Sample D Male 68.0
Putamen
nTPM: 88.2
Samples: 4

Max nTPM: 107.7
Min nTPM: 73.2
Sample A Female 92.5
Sample B Female 73.2
Sample C Male 107.7
Sample D Male 79.5
Septum
nTPM: 83.3
Samples: 4

Max nTPM: 90.5
Min nTPM: 76.9
Sample A Female 85.7
Sample B Female 76.9
Sample C Male 90.5
Sample D Male 80.1
Ventral pallidum
nTPM: 78.8
Samples: 4

Max nTPM: 83.2
Min nTPM: 74.9
Sample A Female 77.4
Sample B Female 79.8
Sample C Male 83.2
Sample D Male 74.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

169.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 143.0
Samples: 4

Max nTPM: 154.1
Min nTPM: 134.1
Sample A Male 141.5
Sample B Male 134.1
Sample C Female 154.1
Sample D Female 142.2
Septum
nTPM: 169.6
Samples: 4

Max nTPM: 181.0
Min nTPM: 151.6
Sample A Male 151.6
Sample B Male 181.0
Sample C Female 168.3
Sample D Female 177.3
Ventral forebrain
nTPM: 148.0
Samples: 4

Max nTPM: 152.2
Min nTPM: 144.5
Sample A Male 144.5
Sample B Male 146.6
Sample C Female 148.5
Sample D Female 152.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.6
641530 Antisense, RP_040914_01_E10, Mouse strain C57BL/6J (56 days, male) 11.7
74658110 Antisense, RP_060220_02_C06, Mouse strain C57BL/6J (56 days, male) 9.6
Pallidum
Expression energy: 8.9
641530 Antisense, RP_040914_01_E10, Mouse strain C57BL/6J (56 days, male) 10.1
74658110 Antisense, RP_060220_02_C06, Mouse strain C57BL/6J (56 days, male) 7.6

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