PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:146.4 nTPM
FANTOM5:85.2 Scaled Tags Per Million
Pig:98.0 nTPM
Mouse:147.2 nTPM
Allen mouse:6.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 146.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 121.5
2090 Male, age 80, both hemispheres 128.5
2188 Female, age 91, both hemispheres 127.4
2301 Female, age 85, both hemispheres 118.8
1984 Male, age 76, both hemispheres 111.1
Area postrema
nTPM: 144.2
2799 Male, age 61, both hemispheres 159.5
2054 Male, age 76, both hemispheres 140.8
2306 Male, age 80, both hemispheres 132.2
Dorsal cochlear nucleus
nTPM: 117.5
2802 Male, age 74, right hemisphere 138.5
2058 Male, age 76, both hemispheres 127.6
2187 Female, age 91, both hemispheres 115.6
2378 Male, age 80, both hemispheres 110.1
2370 Male, age 61, both hemispheres 95.6
Dorsal medullary reticular nucleus
nTPM: 112.5
2040 Female, age 85, both hemispheres 122.2
2088 Male, age 76, both hemispheres 114.4
2373 Male, age 61, both hemispheres 101.1
Dorsal motor vagal complex
nTPM: 122.8
2797 Male, age 61, both hemispheres 138.1
2000 Male, age 74, unknown 130.4
2844 Male, age 55, unknown 130.3
2133 Female, age 91, both hemispheres 124.1
2185 Male, age 76, both hemispheres 122.4
2643 Male, age 74, both hemispheres 115.7
2813 Female, age 72, unknown 115.0
2807 Female, age 85, both hemispheres 106.6
Dorsal tegmental nucleus
nTPM: 130.5
1936 Male, age 76, left hemisphere 135.4
2083 Male, age 80, both hemispheres 132.2
2358 Male, age 61, both hemispheres 131.0
2326 Male, age 74, both hemispheres 123.3
Dorsolateral tegmental area
nTPM: 130.1
2337 Male, age 61, both hemispheres 152.2
2360 Male, age 74, both hemispheres 143.8
2751 Female, age 85, both hemispheres 123.5
2654 Male, age 80, both hemispheres 119.8
2141 Male, age 76, both hemispheres 111.1
Gigantocellular reticular nuclei, medullary
nTPM: 118.0
2314 Male, age 61, both hemispheres 128.4
1876 Female, age 85, both hemispheres 124.8
2022 Male, age 76, right hemisphere 116.1
2310 Male, age 80, both hemispheres 114.5
2462 Male, age 74, both hemispheres 113.5
2387 Female, age 91, both hemispheres 110.7
Gigantocellular reticular nuclei, pars
nTPM: 118.2
2336 Male, age 61, both hemispheres 126.3
2706 Male, age 80, both hemispheres 124.4
2084 Female, age 85, both hemispheres 117.9
2330 Male, age 80, both hemispheres 117.7
2168 Male, age 76, both hemispheres 104.8
Inferior olive
nTPM: 123.3
2085 Female, age 85, both hemispheres 134.5
2178 Male, age 61, both hemispheres 132.4
2563 Male, age 74, both hemispheres 127.4
2628 Female, age 91, both hemispheres 112.4
2379 Male, age 80, both hemispheres 109.9
Kolliker-Fuse nucleus
nTPM: 126.8
2315 Male, age 76, right hemisphere 144.6
2163 Male, age 80, both hemispheres 128.5
2793 Female, age 91, left hemisphere 107.4
Lateral lemniscal nuclei
nTPM: 110.3
2746 Female, age 85, left hemisphere 119.1
2320 Female, age 91, left hemisphere 118.4
2169 Male, age 76, both hemispheres 110.5
2453 Male, age 74, right hemisphere 109.4
2036 Male, age 80, both hemispheres 94.0
Lateral medullary reticular nucleus
nTPM: 124.8
2305 Male, age 74, both hemispheres 141.4
2852 Male, age 80, both hemispheres 130.9
2044 Male, age 76, both hemispheres 123.3
2804 Female, age 91, both hemispheres 119.3
2190 Female, age 85, both hemispheres 119.2
2374 Male, age 61, both hemispheres 114.6
Lateral parabrachial nucleus
nTPM: 125.5
2792 Male, age 76, both hemispheres 136.0
2790 Male, age 61, both hemispheres 124.0
2013 Male, age 80, both hemispheres 121.5
2139 Female, age 85, right hemisphere 120.5
Lateral vestibular nucleus
nTPM: 127.9
2311 Male, age 80, both hemispheres 128.4
2184 Male, age 76, both hemispheres 127.5
Locus coeruleus
nTPM: 132.7
2014 Male, age 55, unknown 155.6
2317 Female, age 72, unknown 140.1
2162 Male, age 80, both hemispheres 138.0
2123 Female, age 91, both hemispheres 134.5
2720 Male, age 74, both hemispheres 122.7
1980 Male, age 76, both hemispheres 122.3
2788 Male, age 74, unknown 115.3
Medial olivary nucleus
nTPM: 132.9
1962 Male, age 76, both hemispheres 141.4
1943 Male, age 61, both hemispheres 136.7
2138 Female, age 91, both hemispheres 133.9
2851 Male, age 80, both hemispheres 119.6
Medial parabrachial nucleus
nTPM: 126.9
2463 Female, age 85, right hemisphere 135.3
2170 Female, age 91, both hemispheres 132.5
2156 Male, age 61, both hemispheres 127.5
2854 Male, age 80, both hemispheres 125.0
2786 Male, age 76, both hemispheres 114.1
Medial periolivary nuclei
nTPM: 120.7
2171 Female, age 85, both hemispheres 130.9
2081 Male, age 80, both hemispheres 128.3
2791 Male, age 74, right hemisphere 125.5
2063 Male, age 76, both hemispheres 110.8
2458 Female, age 91, both hemispheres 107.8
Medial vestibular nucleus
nTPM: 122.7
2743 Female, age 85, both hemispheres 131.7
2134 Male, age 76, both hemispheres 128.5
2624 Male, age 61, both hemispheres 123.0
2093 Male, age 80, both hemispheres 121.5
2803 Female, age 91, both hemispheres 116.7
2801 Male, age 74, both hemispheres 115.1
Motor facial nucleus
nTPM: 113.8
2795 Female, age 91, both hemispheres 121.5
2126 Male, age 61, both hemispheres 120.9
2365 Male, age 74, right hemisphere 117.8
2062 Male, age 76, both hemispheres 111.3
2697 Female, age 85, both hemispheres 109.2
2327 Male, age 80, both hemispheres 102.0
Motor hypoglossal nucleus
nTPM: 124.2
2125 Female, age 91, both hemispheres 132.6
2277 Male, age 76, both hemispheres 130.4
2182 Male, age 80, both hemispheres 124.4
2132 Female, age 85, both hemispheres 120.3
2461 Male, age 61, both hemispheres 113.5
Motor trigeminal nucleus
nTPM: 116.0
2335 Male, age 61, both hemispheres 127.6
2560 Male, age 74, both hemispheres 116.0
2079 Male, age 80, both hemispheres 113.5
2321 Female, age 91, both hemispheres 113.1
2309 Male, age 76, both hemispheres 109.6
Nuclei of the trapezoid body
nTPM: 115.9
2735 Female, age 85, both hemispheres 125.0
2166 Male, age 80, both hemispheres 119.6
2159 Male, age 61, both hemispheres 116.2
2368 Female, age 91, both hemispheres 112.6
1983 Male, age 76, both hemispheres 106.0
Nucleus ambiguus
nTPM: 142.9
2071 Male, age 76, both hemispheres 146.7
2096 Female, age 85, both hemispheres 139.2
Nucleus cuneatus
nTPM: 113.3
2805 Female, age 91, both hemispheres 123.6
2376 Male, age 61, both hemispheres 118.8
2100 Male, age 76, both hemispheres 116.3
2564 Male, age 74, both hemispheres 114.8
2131 Male, age 76, both hemispheres 113.3
2380 Male, age 80, both hemispheres 111.9
2808 Female, age 85, both hemispheres 110.5
2562 Male, age 61, both hemispheres 110.0
2381 Male, age 80, both hemispheres 100.9
Nucleus gracilis
nTPM: 119.9
2627 Male, age 74, both hemispheres 128.2
2382 Male, age 80, both hemispheres 122.2
2299 Female, age 85, both hemispheres 109.3
Nucleus raphe magnus
nTPM: 119.1
2160 Male, age 61, both hemispheres 128.8
2455 Male, age 74, both hemispheres 125.3
2172 Female, age 85, both hemispheres 120.9
2459 Female, age 91, both hemispheres 120.4
2328 Male, age 80, both hemispheres 114.6
2051 Male, age 76, both hemispheres 104.8
Nucleus raphe obscurus
nTPM: 134.0
2142 Male, age 76, midline 147.2
2845 Female, age 85, midline 136.1
2800 Male, age 61, midline 118.8
Nucleus raphe pallidus
nTPM: 146.4
1924 Male, age 61, midline 152.5
2183 Male, age 80, midline 145.2
2145 Male, age 76, midline 141.5
Nucleus tractus solitarii
nTPM: 118.1
2656 Male, age 76, both hemispheres 129.0
2144 Female, age 91, right hemisphere 120.1
2191 Female, age 85, both hemispheres 113.8
2307 Male, age 80, both hemispheres 109.6
Paramedian reticular nucleus
nTPM: 119.4
2057 Male, age 80, both hemispheres 130.1
2313 Male, age 61, both hemispheres 120.4
2052 Male, age 76, both hemispheres 119.4
2050 Female, age 85, both hemispheres 107.5
Parvicellular reticular nuclei
nTPM: 119.8
2119 Male, age 80, both hemispheres 127.0
2095 Male, age 76, both hemispheres 120.5
2558 Male, age 74, both hemispheres 111.8
Parvicellular reticular nuclei, medullary
nTPM: 117.4
2091 Female, age 85, both hemispheres 130.2
2189 Female, age 91, both hemispheres 115.9
2181 Male, age 80, left hemisphere 106.2
Pedunculopontine tegmental nucleus
nTPM: 124.8
2334 Male, age 80, both hemispheres 132.4
1921 Female, age 85, both hemispheres 122.4
2338 Male, age 61, both hemispheres 119.5
Peritrigeminal nucleus
nTPM: 129.3
2179 Male, age 61, both hemispheres 134.1
2136 Male, age 76, both hemispheres 127.0
2067 Female, age 85, both hemispheres 126.9
Pontine nuclei
nTPM: 124.3
2454 Male, age 74, left hemisphere 133.6
2787 Female, age 85, both hemispheres 133.6
2727 Male, age 61, right hemisphere 132.2
2109 Female, age 72, unknown 128.9
2319 Female, age 91, both hemispheres 128.6
1863 Male, age 55, unknown 127.6
2115 Male, age 80, left hemisphere 110.7
1968 Male, age 76, left hemisphere 99.4
Pontine raphe nucleus
nTPM: 117.9
2122 Female, age 85, midline 125.5
2853 Male, age 76, midline 110.4
Posteroventral cochlear nucleus
nTPM: 127.0
2135 Female, age 91, both hemispheres 142.0
2070 Male, age 76, both hemispheres 134.0
2341 Male, age 80, both hemispheres 123.2
2752 Female, age 85, both hemispheres 121.5
2371 Male, age 61, both hemispheres 114.5
Prepositus hypoglossal nucleus
nTPM: 118.3
2855 Female, age 85, right hemisphere 124.0
2086 Male, age 80, both hemispheres 112.6
Principal sensory trigeminal nucleus
nTPM: 122.3
2008 Male, age 80, left hemisphere 124.1
2367 Female, age 91, left hemisphere 123.9
2158 Male, age 61, both hemispheres 122.7
2324 Male, age 76, both hemispheres 118.6
Reticular pontine nucleus, caudal
nTPM: 119.4
2559 Male, age 74, both hemispheres 133.2
2457 Female, age 91, both hemispheres 125.3
2092 Male, age 76, both hemispheres 116.0
2332 Male, age 80, right hemisphere 103.3
Reticular pontine nucleus, oral
nTPM: 115.3
1939 Male, age 80, both hemispheres 136.8
2012 Female, age 85, both hemispheres 119.8
2167 Male, age 76, both hemispheres 117.7
2366 Female, age 91, both hemispheres 111.0
2361 Male, age 74, both hemispheres 91.2
Reticulotegmental nucleus
nTPM: 124.2
2452 Male, age 74, both hemispheres 135.5
2333 Male, age 80, both hemispheres 131.9
2322 Female, age 91, both hemispheres 118.2
2325 Male, age 76, both hemispheres 111.2
Spinal trigeminal nucleus, caudal
nTPM: 119.0
2312 Male, age 61, both hemispheres 128.7
2447 Male, age 76, both hemispheres 124.3
2308 Male, age 80, both hemispheres 122.4
2390 Female, age 91, both hemispheres 111.3
2642 Male, age 74, both hemispheres 108.4
Spinal trigeminal nucleus, interpolar
nTPM: 119.0
2066 Male, age 76, right hemisphere 135.3
2625 Male, age 61, both hemispheres 128.5
2033 Male, age 80, both hemispheres 121.3
2386 Female, age 85, both hemispheres 112.1
2389 Female, age 91, both hemispheres 97.6
Spinal trigeminal nucleus, oral
nTPM: 114.2
2737 Female, age 85, both hemispheres 127.4
2164 Male, age 80, both hemispheres 117.0
1978 Male, age 76, both hemispheres 98.3
Spinal vestibular nucleus
nTPM: 118.6
2796 Male, age 61, both hemispheres 122.0
2748 Male, age 76, both hemispheres 121.8
2384 Male, age 74, both hemispheres 121.6
2780 Male, age 80, both hemispheres 121.0
2806 Female, age 85, both hemispheres 114.7
2186 Female, age 91, both hemispheres 110.7
Subcoeruleus area
nTPM: 119.8
2451 Male, age 74, both hemispheres 133.6
2369 Female, age 85, left hemisphere 123.1
2323 Female, age 91, left hemisphere 119.8
1958 Male, age 80, both hemispheres 111.3
2089 Male, age 76, left hemisphere 111.3
Superior olive
nTPM: 111.8
2329 Male, age 80, right hemisphere 120.5
2020 Male, age 76, both hemispheres 118.2
1875 Female, age 85, both hemispheres 117.5
2364 Male, age 74, right hemisphere 103.3
2561 Female, age 91, both hemispheres 99.6
Superior vestibular nucleus
nTPM: 128.8
2061 Male, age 76, both hemispheres 132.9
2383 Male, age 74, both hemispheres 129.7
2015 Male, age 80, both hemispheres 123.8
Ventral medullary reticular nucleus
nTPM: 114.0
2060 Male, age 76, both hemispheres 116.2
2372 Male, age 61, both hemispheres 111.7
Ventral periolivary nuclei
nTPM: 117.2
2130 Female, age 85, both hemispheres 127.3
2165 Male, age 80, both hemispheres 118.6
2023 Male, age 76, both hemispheres 117.7
2794 Female, age 91, left hemisphere 105.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 123.6
1986 Male, age 76, both hemispheres 127.8
2180 Male, age 61, both hemispheres 123.8
2741 Female, age 85, both hemispheres 123.6
2118 Male, age 80, both hemispheres 123.2
2302 Female, age 91, both hemispheres 119.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 124.4
2359 Male, age 61, both hemispheres 138.4
2449 Male, age 74, both hemispheres 134.0
2840 Female, age 85, both hemispheres 131.6
2161 Male, age 80, both hemispheres 114.7
1959 Male, age 76, both hemispheres 113.8
2456 Female, age 91, both hemispheres 113.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 85.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 79.2
FF:10182-103D2 60 years, female 94.7
FF:10165-103B3 76 years, female 63.7
Medulla oblongata
Scaled Tags Per Million: 64.9
FF:10038-101F2 18-64 years, mixed 70.6
FF:10174-103C3 60 years, female 68.2
FF:10155-103A2 76 years, female 55.8
Pons
Scaled Tags Per Million: 85.2
FF:10033-101E6 18-54 years, mixed 85.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 98.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 98.0
Samples: 4

Max nTPM: 105.9
Min nTPM: 89.0
Sample A Female 99.2
Sample B Female 89.0
Sample C Male 98.0
Sample D Male 105.9
Pons
nTPM: 93.9
Samples: 4

Max nTPM: 103.7
Min nTPM: 83.2
Sample A Female 89.4
Sample B Female 83.2
Sample C Male 103.7
Sample D Male 99.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 147.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 147.2
Samples: 4

Max nTPM: 152.3
Min nTPM: 142.4
Sample A Male 142.4
Sample B Male 152.3
Sample C Female 146.6
Sample D Female 147.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.4
74658110 Antisense, RP_060220_02_C06, Mouse strain C57BL/6J (56 days, male) 7.1
641530 Antisense, RP_040914_01_E10, Mouse strain C57BL/6J (56 days, male) 5.6
Pons
Expression energy: 5.3
74658110 Antisense, RP_060220_02_C06, Mouse strain C57BL/6J (56 days, male) 6.9
641530 Antisense, RP_040914_01_E10, Mouse strain C57BL/6J (56 days, male) 3.8

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