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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:10.0 nTPM
HPA Brain:8.4 nTPM
GTEx:10.0 nTPM
FANTOM5:63.8 Scaled Tags Per Million
Pig:28.3 nTPM
Mouse:19.3 nTPM
Allen mouse:1.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA053214Antibody HPA055846
Glial cells LowNot detected
Neuronal cells MediumNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 6.0
1857 Female, age 85, left hemisphere 7.2
2481 Female, age 94, left hemisphere 7.1
2290 Female, age 72, unknown 6.7
1854 Male, age 80, left hemisphere 6.4
2846 Female, age 79, unknown 6.2
2288 Male, age 75, left hemisphere 5.5
1781 Male, age 74, unknown 5.0
2289 Male, age 61, right hemisphere 4.2
Globus pallidus, externus
nTPM: 8.4
2772 Female, age 79, unknown 9.9
1996 Male, age 80, right hemisphere 9.5
2646 Male, age 61, right hemisphere 8.9
2395 Male, age 75, both hemispheres 7.2
2567 Female, age 72, unknown 6.4
Globus pallidus, internus
nTPM: 7.5
1818 Male, age 74, unknown 9.3
2778 Female, age 91, both hemispheres 8.4
2483 Female, age 94, right hemisphere 8.3
2287 Male, age 75, right hemisphere 8.0
2111 Female, age 85, right hemisphere 7.6
2037 Male, age 80, right hemisphere 5.9
2566 Female, age 72, unknown 4.9
Nucleus accumbens
nTPM: 6.0
2824 Male, age 61, right hemisphere 7.8
1806 Female, age 85, left hemisphere 7.0
2286 Male, age 75, left hemisphere 6.3
2698 Female, age 72, unknown 6.0
2391 Female, age 94, left hemisphere 5.9
1783 Male, age 74, unknown 5.6
2732 Male, age 80, right hemisphere 5.1
1856 Female, age 91, right hemisphere 4.5
Nucleus basalis of Meynert
nTPM: 6.4
2569 Male, age 61, both hemispheres 8.0
2393 Male, age 80, right hemisphere 6.9
2821 Male, age 75, both hemispheres 5.7
2484 Female, age 94, left hemisphere 5.0
Nucleus of the diagonal band
nTPM: 5.2
1812 Female, age 91, both hemispheres 6.8
2775 Male, age 80, right hemisphere 5.2
2029 Male, age 61, right hemisphere 5.0
1979 Male, age 74, unknown 4.6
2195 Female, age 85, both hemispheres 4.2
Putamen
nTPM: 5.9
2482 Female, age 94, left hemisphere 7.3
1829 Male, age 74, unknown 6.0
1838 Male, age 80, right hemisphere 5.9
2647 Male, age 75, left hemisphere 5.8
1937 Female, age 91, right hemisphere 5.7
2466 Female, age 79, unknown 5.1
2489 Female, age 72, unknown 5.1
Septal nuclei
nTPM: 4.8
2059 Female, age 85, both hemispheres 5.5
2031 Female, age 72, unknown 5.3
2199 Male, age 80, right hemisphere 5.3
2009 Female, age 91, both hemispheres 5.2
2629 Female, age 94, right hemisphere 4.4
2394 Male, age 61, left hemisphere 4.2
1960 Male, age 74, unknown 3.9
Stria terminalis, bed nucleus
nTPM: 3.9
2201 Male, age 74, unknown 4.4
1974 Female, age 91, both hemispheres 4.1
2486 Female, age 94, both hemispheres 3.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 8.6
Samples: 246

Max nTPM: 24.2
Min nTPM: 3.3
Std nTPM: 2.8
Median nTPM: 8.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 24.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 17.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 17.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 16.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 16.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 16.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 15.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 15.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 14.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 13.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 13.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 13.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 13.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 13.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 13.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 12.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 12.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 12.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 12.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 12.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 12.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 12.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 12.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 12.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 12.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 12.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 11.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 11.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 11.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 11.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 11.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 11.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 11.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 11.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 11.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 11.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 11.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 11.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 11.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 11.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 11.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 11.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 10.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 10.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 10.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 10.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 10.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 10.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 10.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 10.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 10.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 10.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 10.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 10.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 10.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 10.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 10.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 10.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 10.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 9.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 9.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 9.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 9.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 9.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 9.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 9.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 9.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 9.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 9.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 9.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 9.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 9.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 9.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 9.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 9.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 9.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 9.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 9.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 9.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 9.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 9.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 9.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 9.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 9.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 9.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 9.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 9.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 9.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 9.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 9.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 9.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 9.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 9.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 9.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 8.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 8.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 8.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 8.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 8.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 8.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 8.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 8.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 8.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 8.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 8.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 8.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 8.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 8.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 8.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 8.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 8.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 8.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 8.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 8.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 8.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 8.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 8.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 8.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 8.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 8.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 8.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 8.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 8.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 8.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 8.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 8.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 8.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 8.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 8.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 8.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 8.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 8.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 8.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 7.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 7.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 7.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 7.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 7.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 7.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 7.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 7.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 7.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 7.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 7.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 7.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 7.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 7.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 7.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 7.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 7.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 7.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 7.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 7.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 7.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 7.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 7.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 7.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 7.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 7.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 7.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 7.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 7.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 7.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 7.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 7.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 7.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 7.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 7.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 7.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 7.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 7.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 7.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 7.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 7.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 7.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 7.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 7.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 7.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 7.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 7.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 6.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 6.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 6.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 6.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 6.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 6.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 6.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 6.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 6.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 6.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 6.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 6.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 6.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 6.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 6.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 6.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 6.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 6.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 6.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 6.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 6.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 6.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 6.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 6.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 6.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 5.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 5.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 5.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 5.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 5.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 5.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 5.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 5.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 5.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 5.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 5.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 5.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 5.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 5.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 5.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 5.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 5.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 5.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 5.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 5.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 5.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 5.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 5.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 5.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 5.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 5.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 4.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 4.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 4.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 4.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 4.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 4.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 4.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 4.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 4.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 4.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 3.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 3.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 3.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 3.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 8.6
Samples: 246

Max nTPM: 20.0
Min nTPM: 2.4
Std nTPM: 3.0
Median nTPM: 7.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 20.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 17.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 17.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 16.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 16.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 15.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 15.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 15.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 15.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 14.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 14.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 14.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 14.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 13.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 13.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 13.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 13.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 13.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 13.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 13.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 13.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 13.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 13.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 13.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 13.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 13.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 13.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 12.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 12.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 12.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 12.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 12.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 12.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 12.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 12.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 12.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 12.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 11.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 11.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 11.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 11.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 11.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 11.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 11.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 11.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 11.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 11.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 11.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 11.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 11.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 11.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 11.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 11.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 11.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 11.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 11.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 10.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 10.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 10.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 10.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 10.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 10.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 10.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 10.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 10.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 10.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 10.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 10.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 10.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 10.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 10.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 10.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 10.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 10.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 10.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 10.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 9.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 9.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 9.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 9.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 9.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 9.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 9.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 9.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 9.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 9.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 9.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 9.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 9.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 9.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 9.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 9.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 8.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 8.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 8.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 8.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 8.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 8.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 8.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 8.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 8.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 8.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 8.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 8.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 8.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 8.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 8.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 8.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 8.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 8.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 8.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 8.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 8.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 8.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 8.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 8.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 8.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 8.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 8.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 8.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 8.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 8.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 8.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 7.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 7.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 7.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 7.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 7.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 7.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 7.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 7.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 7.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 7.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 7.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 7.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 7.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 7.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 7.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 7.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 7.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 7.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 7.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 7.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 7.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 7.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 7.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 7.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 7.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 7.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 7.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 7.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 7.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 7.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 7.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 7.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 7.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 7.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 6.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 6.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 6.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 6.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 6.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 6.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 6.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 6.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 6.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 6.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 6.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 6.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 6.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 6.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 6.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 6.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 6.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 6.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 6.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 6.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 6.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 6.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 6.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 6.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 6.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 6.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 6.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 6.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 6.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 6.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 6.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 6.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 6.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 6.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 6.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 6.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 6.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 6.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 6.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 5.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 5.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 5.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 5.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 5.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 5.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 5.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 5.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 5.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 5.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 5.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 5.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 5.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 5.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 5.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 5.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 5.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 5.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 5.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 5.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 5.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 5.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 5.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 5.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 5.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 5.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 5.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 5.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 5.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 5.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 5.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 5.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 4.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 4.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 4.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 4.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 4.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 4.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 4.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 4.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 4.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 4.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 4.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 4.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 3.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 3.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 3.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 3.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 2.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 2.4
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Brain - Putamen (basal ganglia)
Average nTPM: 10.0
Samples: 205

Max nTPM: 32.5
Min nTPM: 4.0
Std nTPM: 3.6
Median nTPM: 9.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 32.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 27.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 19.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 19.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 18.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 17.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 17.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 17.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 16.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 16.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 16.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 15.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 15.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 15.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 15.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 15.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 15.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 15.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 14.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 14.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 14.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 14.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 14.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 14.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 14.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 13.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 13.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 13.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 13.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 13.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 13.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 12.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 12.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 12.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 12.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 12.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 12.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 12.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 12.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 12.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 12.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 12.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 11.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 11.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 11.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 11.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 11.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 11.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 11.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 11.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 11.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 11.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 11.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 11.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 11.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 11.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 11.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 11.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 11.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 11.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 11.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 11.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 11.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 11.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 10.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 10.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 10.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 10.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 10.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 10.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 10.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 10.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 10.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 10.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 10.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 10.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 10.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 10.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 10.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 10.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 10.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 10.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 10.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 9.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 9.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 9.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 9.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 9.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 9.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 9.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 9.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 9.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 9.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 9.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 9.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 9.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 9.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 9.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 9.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 9.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 9.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 9.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 9.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 9.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 9.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 8.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 8.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 8.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 8.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 8.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 8.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 8.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 8.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 8.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 8.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 8.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 8.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 8.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 8.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 8.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 8.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 8.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 8.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 8.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 8.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 8.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 8.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 8.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 8.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 8.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 8.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 8.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 8.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 8.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 8.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 8.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 8.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 8.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 7.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 7.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 7.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 7.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 7.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 7.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 7.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 7.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 7.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 7.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 7.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 7.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 7.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 7.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 7.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 7.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 7.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 7.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 7.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 7.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 7.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 7.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 7.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 7.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 7.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 7.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 7.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 7.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 7.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 7.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 6.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 6.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 6.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 6.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 6.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 6.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 6.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 6.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 6.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 6.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 6.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 6.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 6.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 6.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 6.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 6.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 6.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 5.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 5.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 5.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 5.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 5.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 5.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 5.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 5.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 5.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 5.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 5.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 5.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 4.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 4.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 4.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 4.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

63.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 53.6
FF:10164-103B2 76 years, female 53.6
Nucleus accumbens
Scaled Tags Per Million: 63.8
FF:10037-101F1 23-56 years, mixed 63.8
Putamen
Scaled Tags Per Million: 46.3
FF:10176-103C5 60 years, female 46.3
Globus pallidus
Scaled Tags Per Million: 62.8
FF:10161-103A8 76 years, female 63.7
FF:10175-103C4 60 years, female 61.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.3
Pig sample Sample description nTPM
Caudate
nTPM: 25.6
Samples: 4

Max nTPM: 28.6
Min nTPM: 23.8
Sample A Female 23.8
Sample B Female 24.4
Sample C Male 25.4
Sample D Male 28.6
Putamen
nTPM: 28.3
Samples: 4

Max nTPM: 32.4
Min nTPM: 25.1
Sample A Female 29.1
Sample B Female 26.5
Sample C Male 32.4
Sample D Male 25.1
Septum
nTPM: 26.1
Samples: 4

Max nTPM: 27.2
Min nTPM: 25.3
Sample A Female 27.2
Sample B Female 26.0
Sample C Male 25.8
Sample D Male 25.3
Ventral pallidum
nTPM: 25.8
Samples: 4

Max nTPM: 26.9
Min nTPM: 24.9
Sample A Female 26.9
Sample B Female 25.8
Sample C Male 24.9
Sample D Male 25.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 19.0
Samples: 4

Max nTPM: 21.4
Min nTPM: 17.3
Sample A Male 17.3
Sample B Male 18.3
Sample C Female 19.1
Sample D Female 21.4
Septum
nTPM: 19.2
Samples: 4

Max nTPM: 20.3
Min nTPM: 17.0
Sample A Male 17.0
Sample B Male 19.4
Sample C Female 20.3
Sample D Female 20.2
Ventral forebrain
nTPM: 19.3
Samples: 4

Max nTPM: 20.2
Min nTPM: 17.3
Sample A Male 17.3
Sample B Male 19.7
Sample C Female 20.2
Sample D Female 19.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.5
513492 Antisense, RP_040810_01_H12, Mouse strain C57BL/6J (56 days, male) 1.5
Pallidum
Expression energy: 1.4
513492 Antisense, RP_040810_01_H12, Mouse strain C57BL/6J (56 days, male) 1.4

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