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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: High
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Medium
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Low
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Low
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:86.8 nTPM
HPA Brain:145.6 nTPM
GTEx:86.8 nTPM
FANTOM5:279.1 Scaled Tags Per Million
Pig:51.1 nTPM
Mouse:25.6 nTPM
Allen mouse:5.8 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA004899Antibody CAB000307
Bergmann glia - cytoplasm/membrane Not detected-
Bergmann glia - nucleus Not detected-
GLUC cells - cytoplasm/membrane Not detected-
GLUC cells - nucleus High-
Purkinje cells -Not detected
Purkinje cells - cytoplasm/membrane Not detected-
Purkinje cells - dendrites Not detected-
Purkinje cells - nucleus Low-
Cells in granular layer -Not detected
Cells in molecular layer -Not detected
Granular cells - cytoplasm/membrane Not detected-
Granular cells - nucleus Medium-
Molecular layer - neuropil Not detected-
Molecular layer cells - cytoplasm/membrane Not detected-
Molecular layer cells - nucleus Low-
Processes in granular layer Not detected-
Processes in molecular layer Not detected-
Processes in white matter Not detected-
Synaptic glomeruli - capsule Not detected-
Synaptic glomeruli - core Not detected-
White matter cells - cytoplasm/membrane Not detected-
White matter cells - nucleus Low-





CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.6
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 133.0
1768 Female, age 72, unknown 205.6
1788 Male, age 55, unknown 176.6
1774 Male, age 80, left hemisphere 134.0
2101 Male, age 74, right hemisphere 132.3
2055 Female, age 91, right hemisphere 112.9
2003 Female, age 85, right hemisphere 112.8
2006 Male, age 61, right hemisphere 97.8
1769 Male, age 76, right hemisphere 91.6
Cerebellar nuclei
nTPM: 82.9
2005 Male, age 80, left hemisphere 93.8
1966 Female, age 91, left hemisphere 91.3
2175 Male, age 61, right hemisphere 89.0
2177 Female, age 85, both hemispheres 88.5
2318 Male, age 74, left hemisphere 88.4
2882 Male, age 76, left hemisphere 88.3
1879 Male, age 55, unknown 70.2
2783 Female, age 72, unknown 70.1
1871 Male, age 74, unknown 66.6
Flocculonodular lobe
nTPM: 145.6
1765 Male, age 55, unknown 196.1
1792 Male, age 74, unknown 187.5
2004 Male, age 61, right hemisphere 149.6
1771 Male, age 80, left hemisphere 144.8
1835 Female, age 85, right hemisphere 136.8
2176 Female, age 91, right hemisphere 115.4
1767 Male, age 76, left hemisphere 88.9
Vermis
nTPM: 136.8
1766 Male, age 55, unknown 170.1
1751 Male, age 74, right hemisphere 166.3
1825 Male, age 74, unknown 165.5
1928 Female, age 72, unknown 156.2
1988 Female, age 85, left hemisphere 143.7
1778 Female, age 91, left hemisphere 143.4
2834 Male, age 80, left hemisphere 113.5
2460 Male, age 61, both hemispheres 90.5
1770 Male, age 76, left hemisphere 82.0

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.8
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 86.8
Samples: 215

Max nTPM: 267.1
Min nTPM: 33.3
Std nTPM: 28.9
Median nTPM: 79.6
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 267.1
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 202.3
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 197.4
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 178.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 178.1
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 169.3
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 165.8
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 139.5
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 139.4
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 139.1
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 138.6
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 136.9
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 130.0
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 127.2
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 123.6
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 123.5
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 122.4
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 122.0
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 121.6
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 121.1
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 118.6
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 117.6
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 117.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 114.9
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 113.6
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 113.3
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 113.1
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 113.0
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 112.7
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 112.7
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 111.6
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 109.4
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 108.2
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 107.9
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 107.5
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 106.6
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 106.0
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 106.0
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 105.4
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 104.2
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 103.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 103.7
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 103.1
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 102.4
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 102.3
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 101.6
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 101.5
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 101.3
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 100.6
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 100.5
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 100.2
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 100.1
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 100.1
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 99.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 98.9
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 98.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 98.7
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 98.0
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 97.9
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 96.7
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 96.6
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 96.1
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 95.9
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 95.8
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 95.7
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 95.7
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 95.6
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 95.4
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 95.1
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 94.6
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 94.4
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 94.2
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 93.4
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 93.0
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 92.8
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 92.2
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 90.9
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 90.8
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 90.5
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 90.5
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 89.8
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 88.9
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 88.1
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 88.1
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 87.8
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 87.6
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 86.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 85.3
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 84.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 84.0
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 83.8
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 83.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 82.7
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 82.5
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 81.8
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 81.3
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 81.3
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 81.3
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 81.0
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 80.9
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 80.6
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 80.4
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 80.3
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 80.3
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 80.2
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 79.8
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 79.6
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 79.6
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 79.5
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 79.5
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 79.2
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 79.0
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 78.9
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 78.2
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 77.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 77.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 77.2
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 77.1
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 77.1
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 76.9
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 76.8
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 76.3
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 76.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 76.2
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 76.0
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 76.0
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 75.9
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 75.9
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 75.7
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 75.6
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 75.5
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 75.3
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 75.1
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 75.1
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 74.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 74.2
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 74.0
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 73.9
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 73.7
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 73.3
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 73.3
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 73.1
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 73.0
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 73.0
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 72.5
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 72.0
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 72.0
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 71.7
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 71.6
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 71.4
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 71.3
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 71.0
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 70.6
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 70.6
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 70.1
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 70.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 69.9
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 69.6
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 69.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 69.3
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 69.1
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 68.4
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 68.4
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 68.2
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 68.1
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 67.4
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 67.2
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 67.2
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 66.9
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 66.8
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 66.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 66.6
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 66.6
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 66.2
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 66.2
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 66.2
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 65.9
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 65.8
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 65.6
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 64.7
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 64.0
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 63.9
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 63.8
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 63.7
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 63.7
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 63.5
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 63.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 62.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 62.2
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 61.5
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 61.3
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 61.3
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 61.0
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 60.3
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 59.5
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 59.3
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 58.2
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 57.7
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 57.7
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 57.5
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 57.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 55.8
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 54.2
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 54.1
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 54.0
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 54.0
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 53.2
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 52.0
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 51.3
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 50.9
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 50.7
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 49.0
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 46.3
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 36.3
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 33.3
Show allShow less
Brain - Cerebellum
Average nTPM: 83.9
Samples: 241

Max nTPM: 240.1
Min nTPM: 46.7
Std nTPM: 25.6
Median nTPM: 79.1
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 240.1
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 178.7
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 170.8
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 160.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 156.6
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 153.0
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 149.1
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 147.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 141.5
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 133.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 132.6
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 131.3
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 129.4
GTEX-145LS-3026-SM-5O99S 60-69 years, female 127.1
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 126.5
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 125.1
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 124.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 124.5
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 124.0
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 119.9
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 119.7
GTEX-1192X-3226-SM-5987D 50-59 years, male 118.5
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 117.2
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 115.8
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 115.5
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 113.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 112.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 111.6
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 111.1
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 111.0
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 110.4
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 110.3
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 108.6
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 108.3
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 107.9
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 105.4
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 105.3
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 105.0
GTEX-15G19-2826-SM-6M48K 60-69 years, male 104.0
GTEX-14PN4-3026-SM-664O4 50-59 years, male 103.5
GTEX-11NUK-3026-SM-5986K 50-59 years, male 103.2
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 102.9
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 102.4
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 102.2
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 101.9
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 100.7
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 100.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 100.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 100.5
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 100.0
GTEX-X261-3126-SM-4PQZC 50-59 years, male 99.2
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 98.5
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 98.0
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 97.2
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 96.9
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 96.6
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 96.6
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 96.4
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 95.9
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 95.3
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 94.0
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 93.4
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 93.1
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 93.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 92.9
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 92.7
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 92.7
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 92.6
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 91.3
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 90.9
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 90.5
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 90.4
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 90.1
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 89.9
GTEX-11EI6-2926-SM-5985U 60-69 years, male 89.8
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 88.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 88.3
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 87.9
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 87.8
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 87.5
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 87.4
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 87.1
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 86.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 86.8
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 86.7
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 86.3
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 86.2
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 86.0
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 85.7
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 85.5
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 85.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 85.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 85.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 84.9
GTEX-WL46-2826-SM-3LK81 50-59 years, male 84.8
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 84.1
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 84.1
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 83.7
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 83.3
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 83.2
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 83.0
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 82.9
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 82.7
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 82.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 82.4
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 82.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 81.9
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 81.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 81.2
GTEX-1B933-3026-SM-731DB 50-59 years, female 81.1
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 81.1
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 81.1
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 81.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 80.7
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 80.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 80.1
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 80.1
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 80.1
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 79.2
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 79.2
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 79.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 78.8
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 78.4
GTEX-14ABY-3026-SM-664NE 50-59 years, male 78.3
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 78.2
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 78.2
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 77.9
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 77.5
GTEX-12126-0926-SM-5FQTW 20-29 years, male 77.3
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 77.1
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 76.6
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 76.5
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 76.1
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 76.0
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 75.7
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 75.7
GTEX-14E6D-2926-SM-664OP 50-59 years, male 75.2
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 75.2
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 74.9
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 74.3
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 74.2
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 73.8
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 73.6
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 73.5
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 73.5
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 73.4
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 73.2
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 73.2
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 73.2
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 73.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 72.7
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 72.4
GTEX-13112-2926-SM-5DUWT 50-59 years, male 72.1
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 72.1
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 72.0
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 72.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 71.8
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 71.7
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 71.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 71.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 70.6
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 70.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 70.4
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 70.2
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 69.9
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 69.6
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 69.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 69.4
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 69.3
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 69.2
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 69.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 69.0
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 69.0
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 68.9
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 68.9
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 68.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 68.8
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 68.6
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 68.6
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 68.4
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 68.1
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 68.0
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 68.0
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 67.8
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 67.5
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 67.4
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 67.4
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 67.0
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 67.0
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 65.5
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 64.8
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 64.7
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 64.7
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 64.4
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 64.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 64.1
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 64.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 64.1
GTEX-18465-2926-SM-7KFSE 50-59 years, male 64.0
GTEX-11ONC-3026-SM-5985W 60-69 years, male 63.8
GTEX-11DYG-2926-SM-5H132 60-69 years, male 63.5
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 63.4
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 63.2
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 62.9
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 62.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 61.8
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 61.4
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 61.2
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 60.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 60.5
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 60.2
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 59.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 58.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 58.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 57.1
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 56.8
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 56.6
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 56.5
GTEX-144GL-2926-SM-5O99F 50-59 years, male 56.4
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 56.2
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 56.1
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 55.9
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 55.7
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 55.6
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 55.2
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 54.8
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 54.2
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 54.1
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 52.8
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 52.8
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 52.1
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 52.0
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 51.1
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 50.8
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 50.4
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 49.6
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 48.6
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 47.8
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 47.8
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 47.4
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 46.7
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

279.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 279.1
FF:10166-103B4 76 years, female 415.0
FF:10083-102B2 22-68 years, mixed 143.2

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.1
Pig sample Sample description nTPM
Cerebellum
nTPM: 51.1
Samples: 4

Max nTPM: 69.7
Min nTPM: 42.5
Sample A Female 69.7
Sample B Female 49.5
Sample C Male 42.7
Sample D Male 42.5

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.6
Mouse sample Sample description nTPM
Cerebellum
nTPM: 25.6
Samples: 4

Max nTPM: 30.0
Min nTPM: 21.0
Sample A Male 26.6
Sample B Male 24.7
Sample C Female 30.0
Sample D Female 21.0

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.8
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 5.8
68745474 Antisense, RP_050210_02_A07, Mouse strain C57BL/6J (56 days, male) 6.4
75651139 Antisense, RP_060518_01_A02, Mouse strain C57BL/6J (56 days, male) 5.1

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