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RBP1
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  • RBP1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:122.5 nTPM
HPA Brain:45.7 nTPM
GTEx:122.5 nTPM
FANTOM5:39.1 Scaled Tags Per Million
Pig:89.1 nTPM
Mouse:19.0 nTPM
Allen mouse:1.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007338Antibody CAB018603Antibody CAB019276
Glial cells LowLowMedium
Neuronal cells Not detectedNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 33.5
2290 Female, age 72, unknown 43.3
1854 Male, age 80, left hemisphere 37.9
2288 Male, age 75, left hemisphere 37.0
2481 Female, age 94, left hemisphere 36.7
2846 Female, age 79, unknown 32.4
1857 Female, age 85, left hemisphere 29.6
1781 Male, age 74, unknown 28.5
2289 Male, age 61, right hemisphere 22.6
Globus pallidus, externus
nTPM: 42.1
1996 Male, age 80, right hemisphere 53.8
2772 Female, age 79, unknown 43.5
2395 Male, age 75, both hemispheres 40.9
2646 Male, age 61, right hemisphere 39.7
2567 Female, age 72, unknown 32.8
Globus pallidus, internus
nTPM: 45.7
2287 Male, age 75, right hemisphere 51.6
1818 Male, age 74, unknown 51.2
2037 Male, age 80, right hemisphere 47.0
2111 Female, age 85, right hemisphere 44.6
2483 Female, age 94, right hemisphere 44.0
2778 Female, age 91, both hemispheres 41.6
2566 Female, age 72, unknown 39.8
Nucleus accumbens
nTPM: 33.5
2732 Male, age 80, right hemisphere 45.9
2698 Female, age 72, unknown 39.8
2391 Female, age 94, left hemisphere 37.9
2286 Male, age 75, left hemisphere 33.4
1806 Female, age 85, left hemisphere 31.1
1856 Female, age 91, right hemisphere 28.6
1783 Male, age 74, unknown 27.2
2824 Male, age 61, right hemisphere 23.8
Nucleus basalis of Meynert
nTPM: 36.3
2569 Male, age 61, both hemispheres 43.7
2821 Male, age 75, both hemispheres 41.5
2393 Male, age 80, right hemisphere 33.5
2484 Female, age 94, left hemisphere 26.7
Nucleus of the diagonal band
nTPM: 25.6
1979 Male, age 74, unknown 35.6
1812 Female, age 91, both hemispheres 27.9
2029 Male, age 61, right hemisphere 23.4
2195 Female, age 85, both hemispheres 21.9
2775 Male, age 80, right hemisphere 19.1
Putamen
nTPM: 36.9
2489 Female, age 72, unknown 47.0
2482 Female, age 94, left hemisphere 41.9
2647 Male, age 75, left hemisphere 39.1
1829 Male, age 74, unknown 34.8
1838 Male, age 80, right hemisphere 33.4
2466 Female, age 79, unknown 33.1
1937 Female, age 91, right hemisphere 28.6
Septal nuclei
nTPM: 31.7
2199 Male, age 80, right hemisphere 44.3
2629 Female, age 94, right hemisphere 43.3
2059 Female, age 85, both hemispheres 32.5
2009 Female, age 91, both hemispheres 31.9
2394 Male, age 61, left hemisphere 24.8
1960 Male, age 74, unknown 22.6
2031 Female, age 72, unknown 22.6
Stria terminalis, bed nucleus
nTPM: 21.3
2201 Male, age 74, unknown 25.1
2486 Female, age 94, both hemispheres 20.1
1974 Female, age 91, both hemispheres 18.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 81.9
Samples: 246

Max nTPM: 223.8
Min nTPM: 13.4
Std nTPM: 36.8
Median nTPM: 76.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 223.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 211.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 207.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 195.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 194.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 189.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 165.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 165.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 159.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 158.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 155.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 155.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 153.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 152.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 152.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 152.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 151.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 148.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 148.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 147.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 144.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 142.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 139.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 135.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 135.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 131.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 131.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 131.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 129.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 128.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 127.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 126.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 122.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 120.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 119.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 115.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 114.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 114.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 113.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 113.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 110.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 110.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 109.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 108.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 108.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 108.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 107.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 106.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 106.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 105.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 104.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 102.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 101.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 101.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 101.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 100.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 99.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 99.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 98.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 97.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 97.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 96.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 96.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 95.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 95.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 95.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 94.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 94.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 93.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 93.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 93.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 92.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 92.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 92.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 92.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 91.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 90.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 89.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 89.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 89.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 89.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 88.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 88.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 87.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 87.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 87.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 87.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 87.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 86.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 86.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 86.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 85.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 85.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 85.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 84.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 84.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 84.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 84.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 83.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 83.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 83.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 83.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 82.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 81.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 81.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 81.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 81.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 81.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 80.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 80.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 80.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 80.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 79.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 78.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 78.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 78.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 78.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 77.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 77.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 77.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 77.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 76.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 76.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 76.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 75.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 75.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 74.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 73.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 73.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 72.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 72.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 71.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 71.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 70.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 70.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 70.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 69.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 69.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 69.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 69.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 68.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 68.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 68.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 67.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 67.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 67.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 67.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 67.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 67.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 66.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 65.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 65.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 65.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 65.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 65.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 64.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 64.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 64.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 64.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 64.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 63.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 62.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 62.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 62.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 61.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 61.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 61.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 61.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 61.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 60.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 60.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 60.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 58.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 58.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 57.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 57.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 57.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 57.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 57.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 56.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 56.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 56.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 56.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 55.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 55.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 55.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 55.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 54.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 54.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 54.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 53.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 53.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 52.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 52.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 51.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 51.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 51.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 51.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 50.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 50.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 50.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 50.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 49.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 48.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 48.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 47.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 47.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 47.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 47.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 46.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 45.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 45.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 45.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 44.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 44.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 44.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 44.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 44.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 43.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 42.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 40.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 40.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 39.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 39.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 39.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 38.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 37.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 37.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 37.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 37.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 36.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 35.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 34.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 34.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 33.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 32.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 31.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 27.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 24.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 16.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 13.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 97.2
Samples: 246

Max nTPM: 350.7
Min nTPM: 25.1
Std nTPM: 45.5
Median nTPM: 85.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 350.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 262.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 239.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 232.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 223.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 216.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 216.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 212.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 200.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 196.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 195.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 188.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 184.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 183.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 182.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 181.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 176.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 175.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 166.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 165.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 164.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 162.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 160.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 159.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 158.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 156.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 152.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 151.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 151.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 150.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 150.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 149.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 146.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 146.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 146.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 141.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 140.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 138.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 137.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 137.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 137.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 135.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 135.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 134.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 133.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 130.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 128.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 127.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 127.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 125.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 125.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 125.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 124.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 120.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 119.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 119.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 118.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 116.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 115.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 115.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 115.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 115.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 114.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 112.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 111.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 109.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 108.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 108.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 107.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 106.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 106.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 106.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 106.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 106.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 105.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 105.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 105.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 105.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 105.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 105.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 104.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 103.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 103.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 103.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 103.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 102.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 101.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 101.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 99.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 99.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 98.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 98.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 98.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 98.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 98.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 97.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 97.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 97.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 95.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 95.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 95.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 95.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 94.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 93.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 93.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 93.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 92.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 92.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 91.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 91.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 91.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 90.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 90.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 90.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 89.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 88.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 88.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 88.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 87.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 86.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 86.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 85.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 85.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 85.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 84.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 84.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 84.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 84.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 83.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 83.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 83.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 83.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 83.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 83.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 82.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 82.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 82.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 82.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 82.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 81.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 79.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 79.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 79.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 79.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 79.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 79.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 78.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 78.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 77.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 77.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 77.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 77.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 76.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 76.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 76.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 76.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 75.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 75.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 75.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 74.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 74.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 74.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 74.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 74.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 73.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 73.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 73.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 72.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 71.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 70.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 70.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 70.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 70.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 70.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 69.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 69.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 69.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 69.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 69.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 68.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 68.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 68.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 67.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 67.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 66.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 66.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 66.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 66.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 65.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 65.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 65.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 64.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 64.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 64.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 64.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 64.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 64.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 63.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 63.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 62.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 61.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 61.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 61.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 61.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 61.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 61.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 60.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 60.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 60.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 59.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 59.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 59.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 59.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 58.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 57.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 57.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 57.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 56.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 56.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 55.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 54.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 54.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 53.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 52.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 49.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 49.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 48.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 48.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 47.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 47.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 46.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 45.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 45.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 45.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 43.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 42.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 42.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 40.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 37.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 36.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 30.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 30.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 28.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 27.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 26.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 25.1
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Brain - Putamen (basal ganglia)
Average nTPM: 122.5
Samples: 205

Max nTPM: 378.5
Min nTPM: 25.8
Std nTPM: 55.6
Median nTPM: 109.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 378.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 329.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 323.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 277.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 264.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 257.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 254.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 243.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 241.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 234.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 231.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 228.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 221.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 221.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 216.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 205.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 203.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 198.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 196.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 193.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 192.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 189.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 186.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 185.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 184.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 183.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 179.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 179.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 177.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 177.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 176.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 175.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 174.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 174.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 167.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 166.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 166.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 166.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 164.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 163.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 161.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 160.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 160.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 159.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 157.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 156.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 154.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 153.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 151.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 150.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 149.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 148.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 147.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 146.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 145.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 142.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 141.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 141.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 141.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 141.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 140.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 139.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 139.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 138.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 138.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 137.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 135.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 135.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 132.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 132.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 130.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 130.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 130.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 129.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 129.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 128.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 128.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 127.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 126.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 125.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 125.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 124.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 124.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 123.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 122.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 120.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 120.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 118.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 118.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 118.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 117.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 116.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 116.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 116.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 116.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 115.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 114.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 114.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 113.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 113.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 111.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 109.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 109.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 108.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 108.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 107.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 107.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 107.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 106.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 106.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 106.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 104.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 104.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 103.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 103.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 102.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 102.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 101.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 101.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 100.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 100.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 100.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 100.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 99.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 99.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 98.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 96.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 96.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 95.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 93.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 92.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 92.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 92.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 91.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 91.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 90.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 88.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 88.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 88.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 88.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 88.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 88.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 87.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 87.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 87.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 87.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 86.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 86.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 85.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 84.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 84.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 83.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 83.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 82.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 82.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 82.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 82.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 81.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 81.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 80.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 80.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 80.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 80.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 79.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 79.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 79.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 79.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 78.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 78.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 77.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 77.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 75.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 75.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 71.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 71.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 70.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 70.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 69.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 68.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 68.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 68.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 68.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 67.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 67.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 66.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 66.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 65.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 65.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 64.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 62.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 62.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 62.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 60.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 60.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 59.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 57.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 56.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 56.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 51.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 50.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 49.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 44.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 44.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 30.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 25.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

39.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 20.0
FF:10164-103B2 76 years, female 20.0
Nucleus accumbens
Scaled Tags Per Million: 35.0
FF:10037-101F1 23-56 years, mixed 35.0
Putamen
Scaled Tags Per Million: 28.5
FF:10176-103C5 60 years, female 28.5
Globus pallidus
Scaled Tags Per Million: 39.1
FF:10175-103C4 60 years, female 56.5
FF:10161-103A8 76 years, female 21.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.1
Pig sample Sample description nTPM
Caudate
nTPM: 89.1
Samples: 4

Max nTPM: 116.0
Min nTPM: 47.3
Sample A Female 47.3
Sample B Female 105.8
Sample C Male 116.0
Sample D Male 87.2
Putamen
nTPM: 81.3
Samples: 4

Max nTPM: 130.2
Min nTPM: 15.3
Sample A Female 15.3
Sample B Female 73.1
Sample C Male 130.2
Sample D Male 106.6
Septum
nTPM: 61.8
Samples: 4

Max nTPM: 102.1
Min nTPM: 27.8
Sample A Female 76.1
Sample B Female 102.1
Sample C Male 27.8
Sample D Male 41.2
Ventral pallidum
nTPM: 64.8
Samples: 4

Max nTPM: 119.4
Min nTPM: 10.4
Sample A Female 119.4
Sample B Female 61.8
Sample C Male 10.4
Sample D Male 67.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 13.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 11.7
Sample A Male 13.1
Sample B Male 11.7
Sample C Female 15.0
Sample D Female 14.0
Septum
nTPM: 9.8
Samples: 4

Max nTPM: 14.0
Min nTPM: 6.0
Sample A Male 10.7
Sample B Male 8.3
Sample C Female 14.0
Sample D Female 6.0
Ventral forebrain
nTPM: 19.1
Samples: 4

Max nTPM: 29.0
Min nTPM: 14.5
Sample A Male 14.5
Sample B Male 15.5
Sample C Female 29.0
Sample D Female 17.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.5
68076899 Antisense, RP_040929_01_A02, Mouse strain C57BL/6J (56 days, male) 1.5
Pallidum
Expression energy: 0.7
68076899 Antisense, RP_040929_01_A02, Mouse strain C57BL/6J (56 days, male) 0.7

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