We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SSR3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SSR3
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:175.9 nTPM
HPA:175.9 nTPM
GTEx:61.8 nTPM
FANTOM5:1310.7 Scaled Tags Per Million

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA014906
Glandular cells High



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

175.9
overview
Female, age 68
Salivary gland sample 216
nTPM: 65.9
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 245.3
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 216.5
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.8
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 61.8
Samples: 162

Max nTPM: 135.9
Min nTPM: 29.1
Std nTPM: 20.0
Median nTPM: 58.3
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 135.9
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 116.5
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 113.5
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 111.9
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 108.8
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 104.0
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 98.4
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 97.8
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 97.8
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 95.8
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 94.7
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 94.4
GTEX-Y111-2626-SM-4TT24 50-59 years, male 94.1
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 93.6
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 92.2
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 91.0
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 89.8
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 87.9
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 87.0
GTEX-15SHV-2226-SM-6M464 60-69 years, male 85.4
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 85.1
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 84.9
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 84.7
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 84.5
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 84.2
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 83.3
GTEX-ZQG8-2126-SM-4YCF1 60-69 years, female 81.8
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 81.4
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 80.6
GTEX-X261-2426-SM-4PQZU 50-59 years, male 79.7
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 78.9
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 78.3
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 78.2
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 77.8
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 77.7
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 77.1
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 76.1
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 75.5
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 73.9
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 73.6
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 73.1
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 72.9
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 72.8
GTEX-1445S-2926-SM-5O993 60-69 years, male 72.5
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 72.3
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 71.9
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 71.6
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 70.7
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 70.6
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 70.5
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 70.3
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 70.0
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 70.0
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 69.6
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 69.4
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 68.6
GTEX-11P82-0926-SM-5986X 20-29 years, male 68.5
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 68.4
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 68.3
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 67.5
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 67.2
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 66.6
GTEX-178AV-1426-SM-6LLID 40-49 years, male 66.1
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 63.9
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 63.8
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 63.7
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 63.5
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 63.4
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 62.9
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 62.7
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 62.0
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 61.8
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 61.4
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 61.2
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 60.8
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 60.2
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 60.1
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 59.6
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 59.0
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 58.8
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 58.4
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 58.3
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 57.7
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 57.5
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 57.3
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 57.1
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 56.2
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 56.1
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 55.3
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 55.1
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 54.8
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 54.7
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 54.5
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 53.8
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 53.5
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 53.3
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 53.1
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 52.8
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 52.5
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 51.8
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 51.7
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 51.4
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 51.0
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 50.5
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 50.2
GTEX-WOFM-2126-SM-4OOSR 20-29 years, male 50.1
GTEX-146FR-1226-SM-5SIA7 60-69 years, female 49.9
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 49.8
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 49.5
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 49.3
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 49.3
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 49.2
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 49.1
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 48.4
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 48.2
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 48.1
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 47.9
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 47.8
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 47.1
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 46.7
GTEX-13O21-1926-SM-5MR39 50-59 years, male 46.6
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 46.3
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 45.7
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 45.2
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 44.5
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 44.4
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 44.4
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 44.0
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 43.7
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 43.5
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 43.4
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 43.1
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 42.5
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 42.2
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 42.2
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 42.1
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 42.0
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 41.8
GTEX-1B932-0626-SM-731EM 40-49 years, female 41.5
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 41.5
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 40.7
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 40.1
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 40.0
GTEX-13113-1526-SM-5EGHV 60-69 years, female 39.6
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 39.3
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 39.1
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 39.1
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 38.8
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 38.3
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 38.2
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 37.8
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 37.4
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 36.7
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 36.6
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 36.1
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 35.5
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 33.8
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 33.5
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 33.5
GTEX-1R9PM-1726-SM-E8VOA 20-29 years, male 31.1
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 30.8
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 29.1
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1310.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 1310.7
FF:10199-103F1 23 years, male 1310.7
Salivary gland
Scaled Tags Per Million: 1054.3
FF:10093-102C3 16-60 years, mixed 1054.3
Submaxillary gland
Scaled Tags Per Million: 715.7
FF:10202-103F4 24 years, male 715.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org