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EEF1B2
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  • EEF1B2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:286.0 nTPM
FANTOM5:115.4 Scaled Tags Per Million
Pig:167.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035029Antibody CAB012477
Glial cells LowMedium
Neuronal cells MediumLow




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

286.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 286.0
Samples: 246

Max nTPM: 709.8
Min nTPM: 149.2
Std nTPM: 77.3
Median nTPM: 271.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 709.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 672.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 612.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 519.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 511.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 496.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 485.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 469.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 457.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 449.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 443.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 442.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 407.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 406.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 388.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 385.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 385.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 385.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 383.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 382.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 381.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 379.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 377.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 377.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 376.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 371.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 369.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 369.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 363.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 361.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 361.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 359.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 352.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 351.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 350.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 350.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 349.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 348.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 347.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 344.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 343.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 339.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 339.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 339.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 338.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 336.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 336.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 334.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 334.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 334.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 331.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 330.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 330.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 328.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 325.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 323.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 323.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 323.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 322.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 321.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 320.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 320.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 319.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 319.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 317.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 317.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 316.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 316.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 315.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 315.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 314.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 313.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 313.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 311.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 310.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 309.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 309.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 308.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 306.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 305.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 304.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 301.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 298.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 297.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 291.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 290.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 288.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 288.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 288.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 287.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 287.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 287.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 286.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 286.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 286.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 284.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 284.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 284.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 284.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 283.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 283.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 283.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 282.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 282.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 281.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 280.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 279.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 279.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 278.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 278.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 278.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 276.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 276.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 275.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 275.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 274.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 273.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 273.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 273.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 273.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 273.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 272.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 271.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 270.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 270.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 270.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 270.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 269.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 269.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 267.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 267.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 267.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 266.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 265.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 265.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 264.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 264.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 263.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 263.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 262.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 262.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 261.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 261.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 261.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 260.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 258.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 258.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 258.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 257.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 257.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 255.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 255.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 255.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 254.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 254.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 253.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 253.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 253.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 253.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 252.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 252.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 250.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 249.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 248.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 247.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 247.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 246.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 246.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 246.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 245.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 244.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 243.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 243.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 241.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 241.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 240.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 240.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 240.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 240.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 240.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 239.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 239.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 237.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 237.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 237.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 236.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 236.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 236.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 235.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 234.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 233.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 233.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 233.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 233.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 232.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 232.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 231.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 230.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 230.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 228.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 228.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 225.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 225.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 224.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 223.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 223.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 222.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 222.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 220.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 220.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 220.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 220.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 219.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 218.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 215.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 215.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 215.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 212.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 211.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 211.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 209.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 207.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 207.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 206.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 205.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 204.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 203.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 203.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 202.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 200.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 199.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 197.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 196.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 195.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 193.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 193.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 192.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 191.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 185.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 185.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 180.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 177.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 172.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 157.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 151.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 149.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

115.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 115.4
FF:10164-103B2 76 years, female 115.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

167.0
Pig sample Sample description nTPM
Caudate
nTPM: 167.0
Samples: 4

Max nTPM: 182.0
Min nTPM: 148.7
Sample A Female 182.0
Sample B Female 163.5
Sample C Male 173.7
Sample D Male 148.7

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