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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

POMC
Synonyms ACTH, CLIP, LPH, MSH, NPP, POC
Gene descriptioni

Full gene name according to HGNC.

Proopiomelanocortin
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband p23.3
Chromosome location (bp) 25160853 - 25168903
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000115138 (version 109)
Entrez gene 5443
HGNC HGNC:9201
UniProt P01189 (UniProt - Evidence at protein level)
neXtProt NX_P01189
GeneCards POMC
Antibodypedia POMC antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

[Corticotropin]: Stimulates the adrenal glands to release cortisol.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Endorphin, Hormone
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a preproprotein that undergoes extensive, tissue-specific, post-translational processing via cleavage by subtilisin-like enzymes known as prohormone convertases. There are eight potential cleavage sites within the preproprotein and, depending on tissue type and the available convertases, processing may yield as many as ten biologically active peptides involved in diverse cellular functions. The encoded protein is synthesized mainly in corticotroph cells of the anterior pituitary where four cleavage sites are used; adrenocorticotrophin, essential for normal steroidogenesis and the maintenance of normal adrenal weight, and lipotropin beta are the major end products. In other tissues, including the hypothalamus, placenta, and epithelium, all cleavage sites may be used, giving rise to peptides with roles in pain and energy homeostasis, melanocyte stimulation, and immune modulation. These include several distinct melanotropins, lipotropins, and endorphins that are contained within the adrenocorticotrophin and beta-lipotropin peptides. The antimicrobial melanotropin alpha peptide exhibits antibacterial and antifungal activity. Mutations in this gene have been associated with early onset obesity, adrenal insufficiency, and red hair pigmentation. Alternatively spliced transcript variants encoding the same protein have been described. [provided by RefSeq, Jan 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
POMC-201
ENSP00000264708
ENST00000264708
P01189
[Direct mapping] Pro-opiomelanocortin NPP Melanotropin gamma Potential peptide Corticotropin Melanocyte-stimulating hormone alpha Corticotropin-like intermediary peptide Lipotropin beta Lipotropin gamma Melanocyte-stimulating hormone beta Beta-endorphin Met-enkephalin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Human disease related genes
   Endocrine and metabolic diseases
   Other endocrine and metabolic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0005102 [signaling receptor binding]
GO:0005179 [hormone activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0006091 [generation of precursor metabolites and energy]
GO:0007165 [signal transduction]
GO:0007218 [neuropeptide signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0008217 [regulation of blood pressure]
GO:0019722 [calcium-mediated signaling]
GO:0030141 [secretory granule]
GO:0031781 [type 3 melanocortin receptor binding]
GO:0031782 [type 4 melanocortin receptor binding]
GO:0032098 [regulation of appetite]
GO:0032720 [negative regulation of tumor necrosis factor production]
GO:0033059 [cellular pigmentation]
GO:0034774 [secretory granule lumen]
GO:0043950 [positive regulation of cAMP-mediated signaling]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0070996 [type 1 melanocortin receptor binding]
GO:1990680 [response to melanocyte-stimulating hormone]
GO:2000852 [regulation of corticosterone secretion]
Show all
267 aa
29.4 kDa
Yes 0
POMC-202
ENSP00000370171
ENST00000380794
P01189
[Direct mapping] Pro-opiomelanocortin NPP Melanotropin gamma Potential peptide Corticotropin Melanocyte-stimulating hormone alpha Corticotropin-like intermediary peptide Lipotropin beta Lipotropin gamma Melanocyte-stimulating hormone beta Beta-endorphin Met-enkephalin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Human disease related genes
   Endocrine and metabolic diseases
   Other endocrine and metabolic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0005102 [signaling receptor binding]
GO:0005179 [hormone activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0006091 [generation of precursor metabolites and energy]
GO:0007165 [signal transduction]
GO:0007218 [neuropeptide signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0008217 [regulation of blood pressure]
GO:0019722 [calcium-mediated signaling]
GO:0030141 [secretory granule]
GO:0031781 [type 3 melanocortin receptor binding]
GO:0031782 [type 4 melanocortin receptor binding]
GO:0032098 [regulation of appetite]
GO:0032720 [negative regulation of tumor necrosis factor production]
GO:0033059 [cellular pigmentation]
GO:0034774 [secretory granule lumen]
GO:0043950 [positive regulation of cAMP-mediated signaling]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0070996 [type 1 melanocortin receptor binding]
GO:1990680 [response to melanocyte-stimulating hormone]
GO:2000852 [regulation of corticosterone secretion]
Show all
267 aa
29.4 kDa
Yes 0
POMC-203
ENSP00000379170
ENST00000395826
P01189
[Direct mapping] Pro-opiomelanocortin NPP Melanotropin gamma Potential peptide Corticotropin Melanocyte-stimulating hormone alpha Corticotropin-like intermediary peptide Lipotropin beta Lipotropin gamma Melanocyte-stimulating hormone beta Beta-endorphin Met-enkephalin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Human disease related genes
   Endocrine and metabolic diseases
   Other endocrine and metabolic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0005102 [signaling receptor binding]
GO:0005179 [hormone activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0006091 [generation of precursor metabolites and energy]
GO:0007165 [signal transduction]
GO:0007218 [neuropeptide signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0008217 [regulation of blood pressure]
GO:0019722 [calcium-mediated signaling]
GO:0030141 [secretory granule]
GO:0031781 [type 3 melanocortin receptor binding]
GO:0031782 [type 4 melanocortin receptor binding]
GO:0032098 [regulation of appetite]
GO:0032720 [negative regulation of tumor necrosis factor production]
GO:0033059 [cellular pigmentation]
GO:0034774 [secretory granule lumen]
GO:0042593 [glucose homeostasis]
GO:0043950 [positive regulation of cAMP-mediated signaling]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0070873 [regulation of glycogen metabolic process]
GO:0070996 [type 1 melanocortin receptor binding]
GO:0140668 [positive regulation of oxytocin production]
GO:1990680 [response to melanocyte-stimulating hormone]
GO:2000852 [regulation of corticosterone secretion]
Show all
267 aa
29.4 kDa
Yes 0
POMC-204
ENSP00000384092
ENST00000405623
P01189
[Direct mapping] Pro-opiomelanocortin NPP Melanotropin gamma Potential peptide Corticotropin Melanocyte-stimulating hormone alpha Corticotropin-like intermediary peptide Lipotropin beta Lipotropin gamma Melanocyte-stimulating hormone beta Beta-endorphin Met-enkephalin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Human disease related genes
   Endocrine and metabolic diseases
   Other endocrine and metabolic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0005102 [signaling receptor binding]
GO:0005179 [hormone activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0006091 [generation of precursor metabolites and energy]
GO:0007165 [signal transduction]
GO:0007218 [neuropeptide signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0008217 [regulation of blood pressure]
GO:0019722 [calcium-mediated signaling]
GO:0030141 [secretory granule]
GO:0031781 [type 3 melanocortin receptor binding]
GO:0031782 [type 4 melanocortin receptor binding]
GO:0032098 [regulation of appetite]
GO:0032720 [negative regulation of tumor necrosis factor production]
GO:0033059 [cellular pigmentation]
GO:0034774 [secretory granule lumen]
GO:0043950 [positive regulation of cAMP-mediated signaling]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0070996 [type 1 melanocortin receptor binding]
GO:1990680 [response to melanocyte-stimulating hormone]
GO:2000852 [regulation of corticosterone secretion]
Show all
267 aa
29.4 kDa
Yes 0
POMC-205
ENSP00000387993
ENST00000449220
E9PHK5
[Direct mapping] Pro-opiomelanocortin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Human disease related genes
   Endocrine and metabolic diseases
   Other endocrine and metabolic diseases
Show all
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
GO:0007165 [signal transduction]
Show all
246 aa
27.1 kDa
Yes 0

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