HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:43.3 nTPM
HPA Brain:41.3 nTPM
GTEx:43.3 nTPM
FANTOM5:29.5 Scaled Tags Per Million
Pig:9.6 nTPM
Mouse:63.6 nTPM
Allen mouse:6.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 41.3
Sample id Sample description nTPM
Hippocampus
nTPM: 40.4
1898 Male, age 80, left hemisphere 44.6
2148 Female, age 91, left hemisphere 44.2
2621 Female, age 67, right hemisphere 40.1
1911 Female, age 85, right hemisphere 39.8
1855 Male, age 76, left hemisphere 37.9
2529 Female, age 94, left hemisphere 35.9
Dentate gyrus
nTPM: 39.4
1927 Female, age 91, both hemispheres 44.4
2010 Male, age 76, both hemispheres 40.0
2528 Male, age 74, both hemispheres 39.9
2531 Female, age 67, both hemispheres 38.4
2530 Female, age 94, left hemisphere 37.7
2246 Female, age 85, both hemispheres 36.0
Entorhinal gyrus
nTPM: 39.8
2764 Male, age 80, right hemisphere 45.5
2117 Female, age 91, right hemisphere 43.7
1938 Female, age 85, left hemisphere 41.7
2686 Male, age 75, right hemisphere 36.9
1787 Male, age 76, left hemisphere 36.1
2613 Female, age 94, left hemisphere 34.7
Hippocampus, CA1
nTPM: 40.8
2749 Male, age 80, left hemisphere 47.7
2082 Female, age 91, right hemisphere 42.7
1873 Female, age 85, both hemispheres 40.6
2045 Male, age 76, both hemispheres 38.6
2527 Male, age 74, both hemispheres 34.6
Hippocampus, CA2
nTPM: 41.3
2249 Male, age 74, both hemispheres 47.3
1892 Male, age 76, both hemispheres 44.8
1963 Male, age 80, left hemisphere 42.0
1940 Female, age 85, left hemisphere 41.7
2113 Female, age 91, right hemisphere 38.0
2437 Female, age 94, left hemisphere 33.7
Hippocampus, CA3
nTPM: 40.8
1867 Male, age 76, both hemispheres 45.6
2436 Male, age 74, both hemispheres 43.9
1891 Female, age 85, both hemispheres 41.5
2137 Male, age 80, left hemisphere 40.6
2620 Female, age 94, left hemisphere 38.9
2861 Female, age 67, both hemispheres 34.1
Parahippocampal cortex
nTPM: 39.5
2018 Male, age 76, both hemispheres 43.5
1990 Female, age 91, right hemisphere 42.3
1933 Female, age 85, both hemispheres 41.9
1850 Male, age 80, both hemispheres 41.6
2692 Male, age 74, both hemispheres 38.9
2250 Female, age 67, right hemisphere 38.7
2245 Female, age 91, both hemispheres 37.9
2532 Female, age 72, left hemisphere 37.6
2693 Female, age 94, both hemispheres 36.6
2622 Female, age 67, right hemisphere 35.9
Perirhinal gyrus
nTPM: 39.9
1847 Female, age 91, left hemisphere 46.7
1794 Male, age 80, right hemisphere 41.9
1841 Female, age 85, right hemisphere 40.0
2848 Male, age 76, right hemisphere 36.0
2521 Female, age 94, right hemisphere 34.8
Subiculum
nTPM: 39.7
1901 Male, age 80, both hemispheres 42.4
2619 Male, age 74, both hemispheres 42.0
2042 Male, age 76, both hemispheres 40.2
2729 Female, age 91, right hemisphere 40.0
1977 Female, age 85, both hemispheres 39.3
2438 Female, age 94, left hemisphere 34.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 43.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.3
Samples: 197

Max nTPM: 77.9
Min nTPM: 18.3
Std nTPM: 9.6
Median nTPM: 42.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 77.9
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 69.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 66.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 65.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 64.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 63.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 62.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 61.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 60.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 60.2
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 59.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 29.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.5
FF:10153-102I9 76 years, female 31.0
FF:10169-103B7 60 years, female 28.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 9.6
Pig sample Sample description nTPM
Subiculum
nTPM: 8.4
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.4
Sample A Female 10.9
Sample B Female 7.7
Sample C Male 7.4
Sample D Male 7.6
Dorsal hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 13.8
Min nTPM: 7.5
Sample A Female 13.8
Sample B Female 7.5
Sample C Male 9.3
Sample D Male 7.6
Entorhinal cortex
nTPM: 8.8
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.7
Sample A Female 10.8
Sample B Female 8.9
Sample C Male 7.9
Sample D Male 7.7
Ventral hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 12.8
Min nTPM: 6.5
Sample A Female 12.8
Sample B Female 6.5
Sample C Male 10.2
Sample D Male 8.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 63.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.9
Samples: 4

Max nTPM: 65.8
Min nTPM: 52.9
Sample A Male 53.1
Sample B Male 63.8
Sample C Female 65.8
Sample D Female 52.9
Hippocampal formation
nTPM: 63.6
Samples: 4

Max nTPM: 68.7
Min nTPM: 60.1
Sample A Male 68.7
Sample B Male 60.1
Sample C Female 61.4
Sample D Female 64.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.2
70525818 Antisense, RP_050317_04_F07, Mouse strain C57BL/6J (56 days, male) 6.2

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