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APC2
HPA
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  • APC2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

APC2
Synonyms APCL
Gene descriptioni

Full gene name according to HGNC.

APC regulator of WNT signaling pathway 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband p13.3
Chromosome location (bp) 1446302 - 1473244
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000115266 (version 109)
Entrez gene 10297
HGNC HGNC:24036
UniProt O95996 (UniProt - Evidence at protein level)
neXtProt NX_O95996
GeneCards APC2
Antibodypedia APC2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Stabilizes microtubules and may regulate actin fiber dynamics through the activation of Rho family GTPases 1. May also function in Wnt signaling by promoting the rapid degradation of CTNNB1 2, 3, 4.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Wnt signaling pathway
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a strongly conserved protein that has an N-terminal coiled-coil domain followed by an armadillo domain, five 20-amino acid repeats, and two SAMP domains. This protein promotes the assembly of a multiprotein complex that recruits and phosphorylates the Wnt effector beta-catenin and targets beta-catenin for ubiquitylation and proteasomal degradation. This protein therefore plays a role in the reduction of cytoplasmic levels of beta-catenin which in turn reduces activation of Wnt target genes that play a pivotal role in the pathogenesis of various human cancers. The protein encoded by this gene is closely related to the adenomatous polyposis coli (APC) tumor-suppressor protein and has similar tumor-suppressor effects. This gene also plays a role in actin assembly, cell-cell adhesion, and microtubule network formation through its interaction with cytoskeletal proteins. This gene has its highest expression in the central nervous system and is involved in brain development through cytoskeletal regulation in neurons. Alternative splicing produces multiple transcript variants encoding distinct isoforms. [provided by RefSeq, May 2017]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
APC2-201
ENSP00000233607
ENST00000233607
O95996
[Direct mapping] Adenomatous polyposis coli protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Congenital malformations of the nervous system
   Other congenital malformations
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000226 [microtubule cytoskeleton organization]
GO:0001708 [cell fate specification]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0005881 [cytoplasmic microtubule]
GO:0005884 [actin filament]
GO:0007026 [negative regulation of microtubule depolymerization]
GO:0007389 [pattern specification process]
GO:0007399 [nervous system development]
GO:0008013 [beta-catenin binding]
GO:0008017 [microtubule binding]
GO:0015630 [microtubule cytoskeleton]
GO:0016055 [Wnt signaling pathway]
GO:0016342 [catenin complex]
GO:0016477 [cell migration]
GO:0030178 [negative regulation of Wnt signaling pathway]
GO:0030496 [midbody]
GO:0030877 [beta-catenin destruction complex]
GO:0031258 [lamellipodium membrane]
GO:0031941 [filamentous actin]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0045171 [intercellular bridge]
GO:0045295 [gamma-catenin binding]
GO:0045595 [regulation of cell differentiation]
GO:0045732 [positive regulation of protein catabolic process]
GO:0048471 [perinuclear region of cytoplasm]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:0090630 [activation of GTPase activity]
Show all
2303 aa
243.9 kDa
No 0
APC2-202
ENSP00000238483
ENST00000238483
B5MDS5
[Direct mapping] Adenomatous polyposis coli protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Congenital malformations of the nervous system
   Other congenital malformations
   Other diseases
   Mental and behavioural disorders
Show all
GO:0005515 [protein binding]
GO:0008013 [beta-catenin binding]
GO:0016055 [Wnt signaling pathway]
GO:0030178 [negative regulation of Wnt signaling pathway]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
Show all
730 aa
80.6 kDa
No 0
APC2-203
ENSP00000442954
ENST00000535453
O95996
[Direct mapping] Adenomatous polyposis coli protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Congenital malformations of the nervous system
   Other congenital malformations
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000226 [microtubule cytoskeleton organization]
GO:0001708 [cell fate specification]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0005881 [cytoplasmic microtubule]
GO:0005884 [actin filament]
GO:0007026 [negative regulation of microtubule depolymerization]
GO:0007389 [pattern specification process]
GO:0007399 [nervous system development]
GO:0008013 [beta-catenin binding]
GO:0008017 [microtubule binding]
GO:0015630 [microtubule cytoskeleton]
GO:0016055 [Wnt signaling pathway]
GO:0016342 [catenin complex]
GO:0016477 [cell migration]
GO:0030178 [negative regulation of Wnt signaling pathway]
GO:0030496 [midbody]
GO:0030877 [beta-catenin destruction complex]
GO:0031258 [lamellipodium membrane]
GO:0031941 [filamentous actin]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0045171 [intercellular bridge]
GO:0045295 [gamma-catenin binding]
GO:0045595 [regulation of cell differentiation]
GO:0045732 [positive regulation of protein catabolic process]
GO:0048471 [perinuclear region of cytoplasm]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:0090630 [activation of GTPase activity]
Show all
2303 aa
243.9 kDa
No 0
APC2-204
ENSP00000468199
ENST00000587149
K7ERC5
[Direct mapping] Adenomatous polyposis coli protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Congenital malformations of the nervous system
   Other congenital malformations
   Other diseases
   Mental and behavioural disorders
Show all
GO:0008013 [beta-catenin binding]
GO:0030178 [negative regulation of Wnt signaling pathway]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
Show all
137 aa
15.2 kDa
No 0
APC2-205
ENSP00000466803
ENST00000587869
K7EN62
[Direct mapping] Adenomatous polyposis coli protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Congenital malformations of the nervous system
   Other congenital malformations
   Other diseases
   Mental and behavioural disorders
Show all
GO:0008013 [beta-catenin binding]
GO:0030178 [negative regulation of Wnt signaling pathway]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
Show all
170 aa
19.3 kDa
No 0
APC2-206
ENSP00000467073
ENST00000590469
O95996
[Direct mapping] Adenomatous polyposis coli protein 2
Show all
A0A0C4DGQ0
[Direct mapping] Adenomatous polyposis coli protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Congenital malformations of the nervous system
   Other congenital malformations
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000226 [microtubule cytoskeleton organization]
GO:0001708 [cell fate specification]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0005881 [cytoplasmic microtubule]
GO:0005884 [actin filament]
GO:0007026 [negative regulation of microtubule depolymerization]
GO:0007389 [pattern specification process]
GO:0007399 [nervous system development]
GO:0008013 [beta-catenin binding]
GO:0008017 [microtubule binding]
GO:0015630 [microtubule cytoskeleton]
GO:0016055 [Wnt signaling pathway]
GO:0016342 [catenin complex]
GO:0016477 [cell migration]
GO:0030178 [negative regulation of Wnt signaling pathway]
GO:0030496 [midbody]
GO:0030877 [beta-catenin destruction complex]
GO:0031258 [lamellipodium membrane]
GO:0031941 [filamentous actin]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0045171 [intercellular bridge]
GO:0045295 [gamma-catenin binding]
GO:0045595 [regulation of cell differentiation]
GO:0045732 [positive regulation of protein catabolic process]
GO:0048471 [perinuclear region of cytoplasm]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:0090630 [activation of GTPase activity]
GO:0098794 [postsynapse]
Show all
2303 aa
243.9 kDa
No 0
APC2-207
ENSP00000466173
ENST00000590877
K7ELQ3
[Direct mapping] Adenomatous polyposis coli protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of eye, brain, and central nervous system
   Congenital malformations
   Congenital malformations of the nervous system
   Other congenital malformations
   Other diseases
   Mental and behavioural disorders
Show all
GO:0008013 [beta-catenin binding]
GO:0030178 [negative regulation of Wnt signaling pathway]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
Show all
193 aa
22.1 kDa
No 0

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