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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS15 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
2954.0
Number of samples
349
Samples
Sample
Description
pTPM
TCGA-23-1022-01A
67 years, female, white, stage:Stage IIIC, dead, 1511 days
13595.0
TCGA-04-1341-01A
85 years, female, white, stage:'--, alive, 33 days
8861.6
TCGA-23-1109-01A
62 years, female, white, stage:Stage IIIC, dead, 1562 days
7725.0
TCGA-13-0923-01A
74 years, female, white, stage:Stage IIIC, alive, 2547 days
7687.0
TCGA-10-0927-01A
65 years, female, stage:Stage IIIC, dead, 2490 days
6818.3
TCGA-23-1113-01A
48 years, female, white, stage:Stage IV, dead, 949 days
6693.9
TCGA-13-0727-01A
71 years, female, white, stage:Stage IIIC, dead, 462 days
6627.8
TCGA-13-0897-01A
54 years, female, white, stage:Stage IIIC, dead, 2182 days
6432.5
TCGA-04-1350-01A
46 years, female, white, stage:Stage IIIC, dead, 1946 days
6293.9
TCGA-10-0938-01A
80 years, female, white, stage:Stage IIIC, dead, 636 days
6186.9
TCGA-04-1347-01A
81 years, female, white, stage:Stage IV, alive, 1919 days
6122.9
TCGA-13-0724-01A
72 years, female, white, stage:Stage IV, dead, 83 days
5949.4
TCGA-13-1477-01A
49 years, female, white, stage:Stage IV, dead, 1662 days
5935.1
TCGA-04-1343-01A
72 years, female, white, stage:Stage IV, dead, 361 days
5914.6
TCGA-10-0937-01A
44 years, female, white, stage:Stage IIIC, dead, 608 days
5879.1
TCGA-29-1690-01A
66 years, female, white, stage:Stage IIIC, dead, 1448 days
5839.0
TCGA-61-1721-01A
38 years, female, white, stage:Stage IV, alive, 338 days
5660.1
TCGA-30-1861-01A
74 years, female, white, stage:Stage IIIC, dead, 1058 days
5657.4
TCGA-61-2092-01A
57 years, female, white, stage:Stage IIIC, alive, 1573 days
5646.0
TCGA-13-0924-01A
45 years, female, white, stage:Stage IV, alive, 2614 days
5565.5
TCGA-24-2038-01A
68 years, female, white, stage:Stage IIIA, dead, 1354 days
5534.4
TCGA-10-0931-01A
44 years, female, white, stage:Stage IIIC, dead, 1000 days
5466.8
TCGA-13-0887-01A
42 years, female, white, stage:Stage IIIC, dead, 2028 days
5417.9
TCGA-25-1328-01A
38 years, female, white, stage:Stage IIIC, dead, 2009 days
5384.7
TCGA-09-2048-01A
63 years, female, white, stage:Stage IIIC, dead, 138 days
5380.1
TCGA-29-2425-01A
60 years, female, white, stage:Stage IIIC, alive, 1977 days
5370.6
TCGA-13-0804-01A
73 years, female, white, stage:Stage IIIC, dead, 1073 days
5162.2
TCGA-24-1553-01A
53 years, female, white, stage:Stage IIIB, dead, 1767 days
5159.2
TCGA-24-1431-01A
67 years, female, white, stage:Stage IIIC, dead, 583 days
5129.2
TCGA-61-1910-01A
56 years, female, white, stage:Stage IIC, alive, 1127 days
5108.6
TCGA-23-1027-01A
48 years, female, white, stage:Stage IIIC, dead, 976 days
4950.6
TCGA-20-1682-01A
56 years, female, white, stage:Stage IIIC, alive, 837 days
4931.2
TCGA-09-0364-01A
80 years, female, white, stage:Stage IIC, dead, 887 days
4816.3
TCGA-57-1583-01A
57 years, female, black or african american, stage:Stage IIIC, dead, 346 days
4721.5
TCGA-25-1316-01A
55 years, female, white, stage:Stage IIIC, dead, 1279 days
4708.8
TCGA-13-0766-01A
42 years, female, white, stage:Stage IIIC, dead, 1725 days
4690.1
TCGA-24-0966-01A
78 years, female, black or african american, stage:Stage IIIC, alive, 232 days
4674.8
TCGA-25-1634-01A
75 years, female, white, stage:Stage IIIC, dead, 1091 days
4659.4
TCGA-23-1030-01A
64 years, female, white, stage:Stage IIIC, alive, 886 days
4535.2
TCGA-23-1024-01A
52 years, female, white, stage:Stage IV, alive, 468 days
4497.5
TCGA-24-1464-01A
70 years, female, white, stage:Stage IIIC, dead, 379 days
4398.1
TCGA-13-0726-01A
55 years, female, white, stage:Stage IIIC, dead, 949 days
4374.5
TCGA-61-1998-01A
48 years, female, white, stage:Stage IIIC, alive, 168 days
4370.8
TCGA-13-1489-01A
70 years, female, white, stage:Stage IIIC, dead, 2553 days
4369.9
TCGA-13-1495-01A
60 years, female, white, stage:Stage IIIC, dead, 2749 days
4326.1
TCGA-13-1404-01A
48 years, female, white, stage:Stage IIIC, alive, 2469 days
4245.1
TCGA-09-0367-01A
67 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
4221.0
TCGA-25-2393-01A
81 years, female, white, stage:Stage IIIC, dead, 1157 days
4202.1
TCGA-24-1471-01A
60 years, female, white, stage:Stage IIIC, alive, 36 days
4200.2
TCGA-29-1701-01A
56 years, female, white, stage:Stage IIIC, dead, 515 days
4194.2
TCGA-13-1507-01A
77 years, female, white, stage:Stage IIIC, dead, 1993 days
4107.1
TCGA-29-1761-01A
80 years, female, asian, stage:Stage IIIC, dead, 528 days
4094.3
TCGA-25-1317-01A
66 years, female, white, stage:Stage IIIC, dead, 61 days
4088.8
TCGA-61-2008-01A
40 years, female, asian, stage:Stage IIC, alive, 932 days
4050.0
TCGA-24-1558-01A
73 years, female, white, stage:Stage IIIC, dead, 594 days
4032.7
TCGA-04-1542-01A
52 years, female, white, stage:Stage IIIB, dead, 2561 days
3997.4
TCGA-13-0725-01A
44 years, female, white, stage:Stage IIIC, dead, 377 days
3974.9
TCGA-30-1714-01A
68 years, female, white, stage:Stage IV, dead, 1158 days
3948.2
TCGA-13-0883-01A
61 years, female, white, stage:Stage IIIC, dead, 2097 days
3927.5
TCGA-24-1603-01A
53 years, female, white, stage:Stage IIIB, dead, 2742 days
3919.2
TCGA-30-1892-01A
52 years, female, white, stage:Stage IIIC, dead, 1484 days
3893.5
TCGA-23-1116-01A
83 years, female, white, stage:Stage IIIC, dead, 592 days
3881.8
TCGA-09-1662-01A
58 years, female, white, stage:Stage IV, dead, 2717 days
3858.7
TCGA-13-0795-01A
66 years, female, white, stage:Stage IIIC, dead, 619 days
3836.5
TCGA-24-1428-01A
50 years, female, white, stage:Stage IIIC, alive, 529 days
3832.6
TCGA-24-1567-01A
54 years, female, white, stage:Stage IIIB, dead, 524 days
3812.4
TCGA-24-1604-01A
66 years, female, white, stage:Stage IIIC, dead, 2688 days
3780.0
TCGA-13-0765-01A
50 years, female, white, stage:Stage IIIC, dead, 1389 days
3772.6
TCGA-13-1408-01A
59 years, female, white, stage:Stage IIIC, dead, 1680 days
3754.3
TCGA-24-1842-01A
49 years, female, white, stage:Stage IIIC, alive, 253 days
3737.0
TCGA-13-0911-01A
55 years, female, white, stage:Stage IV, dead, 1355 days
3725.6
TCGA-30-1891-01A
61 years, female, white, stage:Stage IIIC, dead, 914 days
3683.0
TCGA-24-1923-01A
51 years, female, white, stage:Stage IIIC, dead, 690 days
3674.0
TCGA-04-1362-01A
59 years, female, white, stage:Stage IIC, dead, 1348 days
3641.3
TCGA-29-1688-01A
39 years, female, white, stage:Stage IIIC, dead, 2400 days
3638.0
TCGA-29-1769-01A
40 years, female, white, stage:Stage IIIC, alive, 699 days
3632.4
TCGA-24-0982-01A
77 years, female, white, stage:Stage IIIC, dead, 679 days
3628.2
TCGA-59-2355-01A
58 years, female, white, stage:Stage IV, dead, 65 days
3622.2
TCGA-24-1846-01A
45 years, female, stage:Stage IIIC, alive, 133 days
3589.6
TCGA-30-1853-01A
58 years, female, white, stage:Stage IIIC, dead, 1103 days
3585.8
TCGA-13-1409-01A
73 years, female, white, stage:Stage IIIC, dead, 1742 days
3585.2
TCGA-29-1770-01A
54 years, female, white, stage:Stage IIIC, alive, 741 days
3567.4
TCGA-23-1023-01A
65 years, female, white, stage:Stage IIIC, alive, 1233 days
3562.1
TCGA-24-2023-01A
54 years, female, white, stage:Stage IIIA, dead, 1364 days
3560.3
TCGA-30-1862-01A
65 years, female, white, stage:Stage IV, dead, 186 days
3536.9
TCGA-13-1485-01A
48 years, female, white, stage:Stage IV, dead, 629 days
3501.0
TCGA-25-1633-01A
64 years, female, white, stage:Stage IIIC, dead, 1891 days
3491.6
TCGA-29-1768-01A
50 years, female, white, stage:Stage IV, dead, 952 days
3488.7
TCGA-29-1703-01A
56 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
3477.8
TCGA-24-1427-01A
58 years, female, stage:Stage IIIC, alive, 147 days
3475.1
TCGA-13-1483-01A
61 years, female, white, stage:Stage IIIC, dead, 895 days
3468.5
TCGA-61-1733-01A
71 years, female, white, stage:Stage IIIC, alive, 967 days
3456.7
TCGA-20-0987-01A
61 years, female, white, stage:Stage IIIC, dead, 701 days
3450.9
TCGA-13-1497-01A
47 years, female, white, stage:Stage IIIC, alive, 3871 days
3432.4
TCGA-04-1332-01A
70 years, female, white, stage:Stage IIIC, dead, 1247 days
3421.7
TCGA-61-2110-01A
56 years, female, white, stage:Stage IIIC, dead, 1354 days
3409.2
TCGA-61-2009-01A
65 years, female, white, stage:Stage IIIC, alive, 1212 days
3390.4
TCGA-24-2271-01A
55 years, female, asian, stage:Stage IIIC, dead, 962 days
3382.9
TCGA-24-2254-01A
66 years, female, white, stage:Stage IIIC, dead, 1736 days
3361.5
TCGA-23-1110-01A
42 years, female, white, stage:Stage IIIC, alive, 1658 days
3336.7
TCGA-09-1669-01A
54 years, female, white, stage:Stage IIIA, alive, 928 days
3324.6
TCGA-24-1560-01A
51 years, female, white, stage:Stage IIIC, dead, 1341 days
3309.9
TCGA-23-1107-01A
59 years, female, white, stage:Stage IV, dead, 9 days
3275.8
TCGA-13-1501-01A
50 years, female, white, stage:Stage IV, dead, 1314 days
3271.4
TCGA-13-0762-01A
65 years, female, white, stage:Stage IIIC, alive, 3400 days
3262.0
TCGA-13-0730-01A
71 years, female, white, stage:Stage IIIC, dead, 542 days
3167.6
TCGA-24-1413-01A
51 years, female, white, stage:Stage IIIC, alive, 192 days
3162.6
TCGA-13-0920-01A
65 years, female, white, stage:Stage IIIC, dead, 1484 days
3155.4
TCGA-23-1028-01A
43 years, female, white, stage:Stage IIIC, alive, 1503 days
3115.2
TCGA-24-2033-01A
87 years, female, white, stage:Stage IIIC, dead, 562 days
3110.3
TCGA-36-1571-01A
53 years, female, white, stage:Stage IIIB, dead, 695 days
3098.7
TCGA-24-1418-01A
68 years, female, white, stage:Stage IIIC, alive, 243 days
3096.4
TCGA-20-0991-01A
78 years, female, white, stage:Stage IIB, alive, 797 days
3095.7
TCGA-13-0891-01A
73 years, female, white, stage:Stage IV, dead, 3128 days
3095.7
TCGA-20-1687-01A
46 years, female, white, stage:Stage IV, alive, 81 days
3094.0
TCGA-30-1857-01A
64 years, female, white, stage:Stage IV, dead, 8 days
3088.1
TCGA-24-1930-01A
53 years, female, white, stage:Stage IIIC, dead, 2467 days
3075.0
TCGA-25-1318-01A
54 years, female, white, stage:Stage IIIC, dead, 1064 days
3071.3
TCGA-24-1417-01A
54 years, female, white, stage:Stage IV, alive, 238 days
3054.2
TCGA-13-1510-01A
62 years, female, white, stage:Stage IIIC, dead, 1359 days
3046.8
TCGA-25-1312-01A
69 years, female, white, stage:Stage IV, dead, 31 days
3045.8
TCGA-29-1777-01A
47 years, female, white, stage:Stage IIIC, alive, 374 days
3034.4
TCGA-04-1655-01A
49 years, female, white, stage:Stage IIIB, dead, 1380 days
3018.3
TCGA-09-1673-01A
50 years, female, white, stage:Stage IV, alive, 92 days
3014.4
TCGA-13-A5FT-01A
67 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
3006.1
TCGA-25-1877-01A
81 years, female, white, stage:Stage IIIC, dead, 730 days
3005.0
TCGA-59-2363-01A
40 years, female, asian, stage:Stage IIIA, alive, 165 days
2999.5
TCGA-13-1509-01A
64 years, female, white, stage:Stage IV, alive, 2438 days
2985.1
TCGA-61-1728-01A
59 years, female, white, stage:Stage IV, alive, 848 days
2980.3
TCGA-04-1519-01A
48 years, female, stage:Stage IIIC, alive, 24 days
2980.3
TCGA-61-1737-01A
42 years, female, white, stage:Stage IV, alive, 1364 days
2964.2
TCGA-24-1616-01A
56 years, female, white, stage:Stage IIIC, dead, 1163 days
2960.1
TCGA-24-1562-01A
67 years, female, white, stage:Stage IIIC, dead, 1384 days
2951.8
TCGA-24-1845-01A
42 years, female, white, stage:Stage IIIC, alive, 116 days
2941.8
TCGA-24-2261-01A
76 years, female, white, stage:Stage IIIC, dead, 24 days
2927.4
TCGA-13-0714-01A
55 years, female, white, stage:Stage IV, dead, 189 days
2924.8
TCGA-09-1670-01A
57 years, female, white, stage:Stage IIIA, alive, 547 days
2907.9
TCGA-10-0928-01A
71 years, female, white, stage:Stage IIIC, dead, 563 days
2906.1
TCGA-04-1338-01A
78 years, female, white, stage:Stage IIIC, alive, 1418 days
2902.0
TCGA-29-1696-01A
43 years, female, white, stage:Stage IIIC, dead, 1032 days
2893.4
TCGA-61-1918-01A
45 years, female, white, stage:Stage IV, dead, 479 days
2887.4
TCGA-24-0968-01A
59 years, female, white, stage:Stage IIIC, dead, 598 days
2877.2
TCGA-24-1565-01A
74 years, female, white, stage:Stage IIIC, dead, 312 days
2872.4
TCGA-25-1313-01A
62 years, female, white, stage:Stage IV, dead, 820 days
2860.8
TCGA-24-1467-01A
51 years, female, white, stage:Stage IIIC, dead, 3224 days
2855.4
TCGA-61-1907-01A
63 years, female, white, stage:Stage IIIC, alive, 952 days
2853.2
TCGA-61-2101-01A
55 years, female, white, stage:Stage IIIC, dead, 1688 days
2852.5
TCGA-13-0886-01A
67 years, female, white, stage:Stage IIIC, alive, 4665 days
2847.4
TCGA-04-1361-01A
57 years, female, white, stage:Stage IIIB, alive, 989 days
2822.3
TCGA-25-1632-01A
68 years, female, white, stage:Stage IV, dead, 1799 days
2821.6
TCGA-61-1725-01A
40 years, female, white, stage:Stage IIIC, alive, 956 days
2821.5
TCGA-13-1487-01A
74 years, female, white, stage:Stage IV, dead, 681 days
2819.3
TCGA-24-2024-01A
72 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
2814.3
TCGA-23-1123-01A
59 years, female, white, stage:Stage IIIC, dead, 1018 days
2806.5
TCGA-09-1666-01A
57 years, female, white, stage:Stage IIIC, alive, 1752 days
2795.7
TCGA-24-1419-01A
62 years, female, white, stage:Stage IIIC, alive, 239 days
2780.0
TCGA-25-2396-01A
71 years, female, white, stage:Stage IIIC, dead, 92 days
2771.8
TCGA-61-1914-01A
65 years, female, stage:Stage IIIC, alive, 1722 days
2752.9
TCGA-13-1496-01A
65 years, female, white, stage:Stage IIIC, dead, 129 days
2747.1
TCGA-25-1631-01A
73 years, female, white, stage:Stage IIIC, dead, 9 days
2737.0
TCGA-13-0797-01A
49 years, female, white, stage:Stage IIIC, alive, 2121 days
2736.1
TCGA-24-1103-01A
50 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
2728.9
TCGA-57-1582-01A
50 years, female, white, stage:Stage IIIC, dead, 731 days
2721.1
TCGA-23-1119-01A
64 years, female, white, stage:Stage IIIC, alive, 3953 days
2714.7
TCGA-25-1329-01A
76 years, female, white, stage:Stage IIIC, dead, 457 days
2711.1
TCGA-23-1118-01A
45 years, female, white, stage:Stage IIIC, alive, 2616 days
2709.1
TCGA-24-1423-01A
61 years, female, white, stage:Stage IIIC, alive, 190 days
2698.6
TCGA-36-1577-01A
43 years, female, asian, stage:Stage IIC, alive, 783 days
2698.2
TCGA-29-1783-01A
58 years, female, white, stage:Stage IIIC, alive, 220 days
2694.2
TCGA-30-1718-01A
44 years, female, white, stage:Stage IIIC, dead, 1579 days
2690.3
TCGA-36-1574-01A
48 years, female, asian, stage:Stage IIIC, alive, 686 days
2688.0
TCGA-29-1785-01A
55 years, female, white, stage:Stage IIIC, dead, 1104 days
2674.7
TCGA-61-2002-01A
46 years, female, white, stage:Stage IIIC, alive, 547 days
2671.8
TCGA-31-1946-01A
30 years, female, stage:Stage IIIC, alive, 918 days
2658.9
TCGA-13-0916-01A
49 years, female, white, stage:Stage IIIC, alive, 1785 days
2657.3
TCGA-04-1365-01A
87 years, female, white, stage:Stage IIIB, alive, 947 days
2647.9
TCGA-29-1697-01A
62 years, female, white, stage:Stage IIIC, dead, 949 days
2646.3
TCGA-29-1776-01A
63 years, female, black or african american, stage:Stage IIIC, alive, 360 days
2639.4
TCGA-30-1860-01A
58 years, female, white, stage:Stage IIIC, dead, 1366 days
2628.5
TCGA-24-1550-01A
49 years, female, white, stage:Stage IIIC, dead, 1249 days
2625.9
TCGA-13-0885-01A
70 years, female, white, stage:Stage IIIC, alive, 3388 days
2624.7
TCGA-24-2267-01A
58 years, female, white, stage:Stage IIB, dead, 1446 days
2615.5
TCGA-31-1944-01A
47 years, female, white, stage:Stage IIIC, alive, 1386 days
2611.4
TCGA-04-1651-01A
53 years, female, white, stage:Stage IIIC, dead, 1102 days
2611.3
TCGA-13-1488-01A
59 years, female, white, stage:Stage IV, dead, 2154 days
2607.4
TCGA-25-1630-01A
73 years, female, white, stage:Stage IIIC, dead, 1162 days
2605.4
TCGA-13-0906-01A
50 years, female, white, stage:Stage IIIC, alive, 3619 days
2600.3
TCGA-61-2109-01A
40 years, female, white, stage:Stage IIIC, dead, 629 days
2593.9
TCGA-23-2078-01A
66 years, female, white, stage:Stage IIIC, alive, 2661 days
2582.4
TCGA-25-1326-01A
61 years, female, white, stage:Stage IIIC, dead, 1249 days
2581.4
TCGA-59-2350-01A
44 years, female, stage:Stage IV, dead, 679 days
2571.0
TCGA-24-2290-01A
56 years, female, white, stage:Stage IIIC, dead, 1102 days
2568.2
TCGA-59-A5PD-01A
55 years, female, black or african american, stage:Stage IC, dead, 624 days
2552.8
TCGA-24-1416-01A
34 years, female, white, stage:Stage IV, alive, 194 days
2534.6
TCGA-20-1686-01A
75 years, female, white, stage:Stage IIIC, alive, 89 days
2530.1
TCGA-36-1576-01A
76 years, female, stage:Stage IIIC, alive, 915 days
2528.4
TCGA-36-1569-01A
52 years, female, white, stage:Stage IIIC, alive, 885 days
2513.3
TCGA-31-1953-01A
52 years, female, asian, stage:Stage IIIC, alive, 204 days
2511.7
TCGA-29-2427-01A
60 years, female, white, stage:Stage IIIC, alive, 1900 days
2510.3
TCGA-24-1435-01A
57 years, female, white, stage:Stage IIIC, dead, 1324 days
2505.8
TCGA-04-1356-01A
62 years, female, white, stage:Stage IIC, dead, 1499 days
2502.1
TCGA-24-2281-01A
68 years, female, white, stage:Stage IIA, alive, 1357 days
2494.0
TCGA-13-1505-01A
63 years, female, white, stage:Stage IIIC, alive, 1998 days
2479.3
TCGA-24-1544-01A
71 years, female, black or african american, stage:Stage IIIC, dead, 820 days
2445.1
TCGA-25-2401-01A
64 years, female, white, stage:Stage IIIC, dead, 90 days
2439.4
TCGA-59-2352-01A
78 years, female, white, stage:Stage IIIC, dead, 286 days
2436.9
TCGA-13-0888-01A
78 years, female, white, stage:Stage IIIC, dead, 2811 days
2416.2
TCGA-61-2000-01A
67 years, female, white, stage:Stage IIIC, alive, 441 days
2404.4
TCGA-24-1426-01A
43 years, female, white, stage:Stage IIIC, alive, 163 days
2394.3
TCGA-29-1766-01A
74 years, female, white, stage:Stage IIIC, dead, 1199 days
2391.6
TCGA-25-2400-01A
76 years, female, white, stage:Stage IIIC, dead, 1278 days
2387.1
TCGA-23-2077-01A
45 years, female, white, stage:Stage IIIC, alive, 3525 days
2379.2
TCGA-57-1584-01A
47 years, female, white, stage:Stage IIIC, alive, 643 days
2363.1
TCGA-24-1850-01A
72 years, female, white, stage:Stage IIIC, alive, 168 days
2350.3
TCGA-25-1321-01A
65 years, female, white, stage:Stage IIIC, dead, 1033 days
2337.3
TCGA-25-1870-01A
59 years, female, white, stage:Stage IIIC, dead, 455 days
2331.9
TCGA-13-1411-01A
81 years, female, white, stage:Stage IIIC, dead, 531 days
2330.6
TCGA-61-1995-01A
43 years, female, white, stage:Stage IIIC, alive, 61 days
2324.4
TCGA-36-1568-01A
52 years, female, stage:Stage IIIC, alive, 875 days
2320.6
TCGA-24-2297-01A
56 years, female, white, stage:Stage IIIC, dead, 1699 days
2313.8
TCGA-29-1784-01A
55 years, female, white, stage:Stage IIIC, alive, 163 days
2306.8
TCGA-13-1403-01A
48 years, female, white, stage:Stage IIIC, dead, 2345 days
2305.8
TCGA-24-1474-01A
57 years, female, black or african american, stage:Stage IIIC, dead, 676 days
2284.8
TCGA-13-1492-01A
66 years, female, white, stage:Stage IIIC, dead, 3819 days
2283.6
TCGA-13-1498-01A
73 years, female, white, stage:Stage IIIC, dead, 2012 days
2273.8
TCGA-09-2051-01A
42 years, female, white, stage:Stage IIIC, alive, 1919 days
2258.3
TCGA-25-2392-01A
75 years, female, white, stage:Stage IV, dead, 31 days
2256.8
TCGA-13-1512-01A
49 years, female, white, stage:Stage IIIC, alive, 442 days
2249.5
TCGA-61-2097-01A
71 years, female, white, stage:Stage IIC, alive, 1844 days
2248.7
TCGA-29-1694-01A
45 years, female, white, stage:Stage IIIC, dead, 1187 days
2244.2
TCGA-25-1627-01A
73 years, female, white, stage:Stage IIIC, dead, 394 days
2243.9
TCGA-25-1323-01A
72 years, female, white, stage:Stage IIIC, dead, 395 days
2243.8
TCGA-61-1900-01A
51 years, female, black or african american, stage:Stage IIIB, alive, 176 days
2243.7
TCGA-24-1924-01A
65 years, female, white, stage:Stage IIIC, dead, 919 days
2243.4
TCGA-31-1956-01A
60 years, female, white, stage:Stage IIIB, alive, 1342 days
2242.5
TCGA-09-2054-01A
58 years, female, black or african american, stage:Stage IIIC, dead, 637 days
2234.4
TCGA-29-1705-01A
47 years, female, white, stage:Stage IIIC, dead, 555 days
2214.8
TCGA-36-1570-01A
49 years, female, white, stage:Stage IIIC, alive, 655 days
2200.7
TCGA-WR-A838-01A
72 years, female, black or african american, stage:Stage IIIC, dead, 304 days
2195.6
TCGA-61-1911-01A
55 years, female, white, stage:Stage IIA, alive, 1293 days
2183.3
TCGA-29-1763-01A
43 years, female, black or african american, stage:Stage IIC, alive, 2032 days
2177.3
TCGA-13-1410-01A
57 years, female, white, stage:Stage IV, alive, 2464 days
2174.1
TCGA-13-1499-01A
56 years, female, white, stage:Stage IIIC, alive, 3500 days
2165.1
TCGA-23-2084-01A
45 years, female, white, stage:Stage IV, dead, 1516 days
2164.0
TCGA-24-1546-01A
46 years, female, white, stage:Stage IIIC, dead, 1955 days
2151.1
TCGA-59-2351-01A
51 years, female, white, stage:Stage IIIC, alive, 3532 days
2150.7
TCGA-24-1425-01A
45 years, female, white, stage:Stage IIIC, alive, 181 days
2139.2
TCGA-24-1847-01A
45 years, female, white, stage:Stage IV, alive, 343 days
2135.2
TCGA-04-1364-01A
61 years, female, white, stage:Stage IIIC, dead, 1024 days
2133.5
TCGA-29-1762-01A
59 years, female, white, stage:Stage IV, dead, 2634 days
2122.3
TCGA-20-1683-01A
65 years, female, white, stage:Stage IIIC, alive, 772 days
2116.9
TCGA-30-1866-01A
61 years, female, white, stage:Stage IV, dead, 1114 days
2112.3
TCGA-13-2060-01A
51 years, female, white, stage:Stage IV, alive, 2369 days
2105.6
TCGA-24-0979-01A
53 years, female, white, stage:Stage IV, dead, 1264 days
2099.0
TCGA-24-1563-01A
66 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
2095.8
TCGA-09-0366-01A
55 years, female, white, stage:Stage IIIC, dead, 1757 days
2081.9
TCGA-25-1315-01A
50 years, female, white, stage:Stage IIIC, dead, 1583 days
2077.3
TCGA-61-1738-01A
60 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
2074.5
TCGA-25-2404-01A
38 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
2073.0
TCGA-61-1919-01A
58 years, female, white, stage:Stage IIIC, dead, 1161 days
2068.8
TCGA-57-1994-01A
63 years, female, white, stage:'--, alive, 761 days
2065.2
TCGA-24-1105-01A
36 years, female, white, stage:Stage IIIC, dead, 1442 days
2063.2
TCGA-24-1422-01A
82 years, female, black or african american, stage:Stage IIIC, dead, 23 days
2056.4
TCGA-23-1122-01A
53 years, female, white, stage:Stage IIIC, dead, 1189 days
2049.1
TCGA-VG-A8LO-01A
55 years, female, black or african american, stage:Stage IV, dead, 24 days
2035.4
TCGA-25-2409-01A
71 years, female, white, stage:Stage IV, dead, 821 days
2032.7
TCGA-24-1843-01A
66 years, female, white, stage:Stage IIIC, alive, 106 days
2018.6
TCGA-13-0800-01A
52 years, female, white, stage:Stage IIIC, alive, 2661 days
1999.7
TCGA-57-1586-01A
66 years, female, white, stage:Stage IIIC, alive, 679 days
1996.4
TCGA-57-1585-01A
57 years, female, white, stage:Stage IIIC, dead, 53 days
1992.5
TCGA-29-1778-01A
77 years, female, white, stage:Stage IIIC, alive, 454 days
1991.2
TCGA-23-1809-01A
63 years, female, white, stage:Stage IIC, alive, 16 days
1987.7
TCGA-04-1331-01A
78 years, female, white, stage:Stage IIIC, dead, 1336 days
1980.9
TCGA-25-2042-01A
60 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1972.7
TCGA-36-1580-01A
82 years, female, stage:Stage IIIC, dead, 737 days
1958.3
TCGA-04-1530-01A
68 years, female, white, stage:Stage IIIC, dead, 3622 days
1957.1
TCGA-29-1693-01A
72 years, female, white, stage:Stage IIIC, alive, 3096 days
1951.3
TCGA-25-2398-01A
71 years, female, white, stage:Stage IIIC, dead, 1369 days
1948.1
TCGA-24-1104-01A
56 years, female, white, stage:Stage IV, dead, 1933 days
1933.7
TCGA-10-0933-01A
77 years, female, white, stage:Stage IIIC, dead, 446 days
1921.3
TCGA-13-1405-01A
49 years, female, white, stage:Stage IV, dead, 868 days
1914.3
TCGA-24-1424-01A
67 years, female, white, stage:Stage IIIC, alive, 183 days
1909.2
TCGA-23-1111-01A
63 years, female, white, stage:Stage IIIC, alive, 98 days
1909.0
TCGA-25-1626-01A
65 years, female, white, stage:Stage IIIC, dead, 518 days
1899.0
TCGA-24-1434-01A
59 years, female, white, stage:Stage IIIC, dead, 568 days
1893.4
TCGA-09-0369-01A
56 years, female, white, stage:Stage IIIC, dead, 1082 days
1891.2
TCGA-25-1623-01A
71 years, female, white, stage:Stage IV, dead, 565 days
1879.9
TCGA-29-2428-01A
58 years, female, white, stage:Stage IIIC, alive, 1372 days
1871.2
TCGA-24-1552-01A
77 years, female, white, stage:Stage IIIC, dead, 1259 days
1866.4
TCGA-25-2399-01A
80 years, female, white, stage:Stage IIIC, dead, 608 days
1865.3
TCGA-24-2035-01A
65 years, female, white, stage:Stage IIIC, dead, 857 days
1857.5
TCGA-24-1557-01A
49 years, female, white, stage:Stage IIIC, dead, 1213 days
1843.5
TCGA-24-1549-01A
58 years, female, white, stage:Stage IIIB, dead, 1721 days
1839.7
TCGA-25-1320-01A
65 years, female, white, stage:Stage IIIC, dead, 1155 days
1835.8
TCGA-61-2098-01A
62 years, female, white, stage:Stage IIIC, alive, 1993 days
1821.3
TCGA-04-1514-01A
45 years, female, white, stage:Stage IIIA, dead, 1720 days
1821.2
TCGA-24-1430-01A
68 years, female, white, stage:Stage IIIC, dead, 863 days
1819.7
TCGA-61-1741-01A
76 years, female, white, stage:Stage IIIB, dead, 1024 days
1815.5
TCGA-29-1774-01A
82 years, female, white, stage:Stage IIIC, alive, 527 days
1815.1
TCGA-13-0768-01A
73 years, female, white, stage:Stage IIIC, dead, 1784 days
1813.8
TCGA-13-1506-01A
45 years, female, white, stage:Stage IIIC, dead, 1039 days
1802.3
TCGA-29-1695-01A
62 years, female, white, stage:Stage IIIC, dead, 1229 days
1796.6
TCGA-25-1322-01A
62 years, female, white, stage:Stage IV, dead, 91 days
1777.8
TCGA-24-1469-01A
71 years, female, white, stage:Stage IIIC, alive, 277 days
1777.2
TCGA-29-1691-01A
51 years, female, white, stage:Stage IIIC, dead, 1470 days
1751.2
TCGA-24-2020-01A
67 years, female, white, stage:Stage IIIC, dead, 4624 days
1750.8
TCGA-61-1724-01A
47 years, female, white, stage:Stage IIIC, dead, 637 days
1720.4
TCGA-13-0720-01A
48 years, female, white, stage:Stage IIIC, dead, 1355 days
1712.2
TCGA-31-1959-01A
49 years, female, white, stage:Stage IV, alive, 67 days
1703.2
TCGA-24-2026-01A
79 years, female, white, stage:Stage IIIC, dead, 1059 days
1652.0
TCGA-61-2104-01A
53 years, female, white, stage:Stage IIC, alive, 2338 days
1646.6
TCGA-13-1407-01A
51 years, female, white, stage:Stage IIIC, alive, 2534 days
1642.7
TCGA-5X-AA5U-01A
61 years, female, black or african american, stage:Stage IIC, alive, 361 days
1640.4
TCGA-09-2045-01A
50 years, female, asian, stage:Stage IV, dead, 1069 days
1625.0
TCGA-31-1951-01A
58 years, female, white, stage:Stage IIIC, alive, 684 days
1609.3
TCGA-24-2288-01A
70 years, female, white, stage:Stage IIIC, dead, 25 days
1607.6
TCGA-25-1319-01A
73 years, female, white, stage:Stage IIIC, dead, 1977 days
1607.6
TCGA-59-2354-01A
63 years, female, white, stage:Stage IIIC, dead, 1046 days
1582.2
TCGA-24-2027-01A
51 years, female, white, stage:Stage IV, dead, 3337 days
1554.6
TCGA-61-2088-01A
51 years, female, white, stage:Stage IIIC, alive, 145 days
1539.1
TCGA-24-2036-01A
50 years, female, white, stage:Stage IIIA, dead, 1947 days
1518.4
TCGA-61-2012-01A
81 years, female, white, stage:Stage IIC, alive, 932 days
1515.3
TCGA-31-1950-01A
76 years, female, white, stage:Stage IIIC, alive, 571 days
1514.5
TCGA-29-1710-01A
54 years, female, white, stage:Stage IIIC, dead, 951 days
1501.7
TCGA-29-A5NZ-01A
66 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1501.4
TCGA-OY-A56Q-01A
78 years, female, black or african american, stage:Stage IIA, alive, 576 days
1461.8
TCGA-04-1648-01A
57 years, female, white, stage:Stage IIIC, dead, 871 days
1456.6
TCGA-61-2003-01A
53 years, female, white, stage:Stage IIIC, alive, 122 days
1450.3
TCGA-24-2293-01A
47 years, female, white, stage:'--, dead, 506 days
1446.7
TCGA-57-1993-01A
56 years, female, white, stage:Stage IIIC, alive, 763 days
1446.3
TCGA-29-2414-01A
75 years, female, white, stage:Stage IIIC, dead, 2621 days
1442.8
TCGA-23-1120-01A
60 years, female, white, stage:Stage IIIC, alive, 130 days
1440.2
TCGA-24-2289-01A
68 years, female, white, stage:Stage IV, dead, 2049 days
1433.2
TCGA-24-1928-01A
77 years, female, white, stage:Stage IIIC, dead, 336 days
1428.1
TCGA-25-1628-01A
67 years, female, white, stage:Stage IIIC, dead, 627 days
1409.8
TCGA-36-1581-01A
63 years, female, white, stage:Stage IIC, alive, 751 days
1395.3
TCGA-04-1536-01A
60 years, female, black or african american, stage:Stage IV, dead, 885 days
1377.5
TCGA-29-1711-01A
45 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
1355.0
TCGA-25-1635-01A
71 years, female, white, stage:Stage IIIC, dead, 1583 days
1327.7
TCGA-29-1781-01A
69 years, female, white, stage:Stage IIIC, alive, 255 days
1318.4
TCGA-61-2111-01A
61 years, female, white, stage:Stage IV, alive, 3825 days
1316.3
TCGA-24-2298-01A
55 years, female, white, stage:Stage IIIC, dead, 1620 days
1310.8
TCGA-24-2280-01A
74 years, female, white, stage:Stage IIIC, alive, 2143 days
1306.0
TCGA-61-2113-01A
53 years, female, white, stage:Stage IIC, dead, 676 days
1278.2
TCGA-24-1844-01A
64 years, female, white, stage:Stage IIIC, alive, 113 days
1180.3
TCGA-13-1511-01A
52 years, female, asian, stage:Stage IV, dead, 1650 days
1130.1
TCGA-24-1551-01A
53 years, female, white, stage:Stage IIIC, dead, 1579 days
1098.2
TCGA-61-2102-01A
74 years, female, white, stage:Stage IIIC, dead, 197 days
1031.7
TCGA-59-2348-01A
59 years, female, white, stage:Stage IIIC, alive, 5481 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS15 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
829.8
Number of samples
81
Samples
Sample
Description
pTPM
DO46356
68 years, female, NA, stage:III, dead, 911 days
2738.9
DO46384
55 years, female, NA, stage:III, dead, 614 days
2639.2
DO46390
65 years, female, NA, stage:III, dead, 374 days
2183.6
DO46331
72 years, female, NA, stage:III, dead, 612 days
1935.2
DO46546
73 years, female, NA, stage:III, dead, 1889 days
1923.2
DO46333
58 years, female, NA, stage:III, dead, 359 days
1780.9
DO46402
77 years, female, NA, stage:III, dead, 511 days
1495.0
DO46370
54 years, female, NA, stage:III, dead, 1727 days
1421.3
DO46364
45 years, female, NA, stage:III, dead, 806 days
1417.5
DO46404
55 years, female, NA, stage:III, dead, 690 days
1349.0
DO46576
75 years, female, NA, stage:III, alive, 133 days
1308.9
DO46453
66 years, female, NA, stage:III, dead, 3294 days
1198.2
DO46611
52 years, female, NA, stage:III, dead, 734 days
1174.9
DO46366
65 years, female, NA, stage:III, dead, 2054 days
1108.7
DO46342
67 years, female, NA, stage:III, dead, 1398 days
1081.7
DO46513
54 years, female, NA, stage:IV, dead, 1883 days
959.8
DO46326
51 years, female, NA, stage:III, dead, 701 days
956.8
DO46591
58 years, female, NA, stage:III, dead, 195 days
955.7
DO46438
55 years, female, NA, stage:IV, alive, 2227 days
943.8
DO46362
61 years, female, NA, stage:III, dead, 1639 days
919.3
DO46568
66 years, female, NA, stage:III, dead, 320 days
916.6
DO46597
60 years, female, NA, stage:III, dead, 393 days
872.2
DO46602
74 years, female, NA, stage:III, dead, 205 days
863.9
DO46538
57 years, female, NA, stage:III, dead, 1527 days
814.0
DO46443
59 years, female, NA, stage:III, dead, 2464 days
814.0
DO46551
58 years, female, NA, stage:III, dead, 1055 days
806.2
DO46463
49 years, female, NA, stage:III, dead, 2451 days
803.3
DO46518
62 years, female, NA, stage:III, alive, 2960 days
793.6
DO46352
60 years, female, NA, stage:III, dead, 677 days
788.1
DO46378
59 years, female, NA, stage:III, alive, 843 days
784.8
DO46376
58 years, female, NA, stage:III, dead, 1430 days
774.2
DO46328
52 years, female, NA, stage:III, dead, 972 days
756.8
DO46338
59 years, female, NA, stage:III, dead, 596 days
756.4
DO46586
55 years, female, NA, stage:III, dead, 1019 days
752.7
DO46428
59 years, female, NA, stage:IV, alive, 2644 days
748.2
DO46380
51 years, female, NA, stage:III, dead, 1423 days
737.5
DO46394
61 years, female, NA, stage:IV, dead, 1039 days
734.0
DO46408
56 years, female, NA, stage:III, dead, 489 days
733.7
DO46561
52 years, female, NA, stage:III, dead, 195 days
728.1
DO46329
52 years, female, NA, stage:III, dead, 1699 days
716.1
DO46523
52 years, female, NA, stage:IV, alive, 1873 days
702.9
DO46392
48 years, female, NA, stage:III, dead, 628 days
696.9
DO46372
39 years, female, NA, stage:III, dead, 1326 days
687.8
DO46468
67 years, female, NA, stage:III, alive, 2776 days
681.2
DO46334
77 years, female, NA, stage:III, dead, 496 days
679.4
DO46327
54 years, female, NA, stage:III, dead, 184 days
670.0
DO46412
64 years, female, NA, stage:III, dead, 597 days
664.9
DO46533
46 years, female, NA, stage:III, alive, 3667 days
659.7
DO46528
56 years, female, NA, stage:III, alive, 6139 days
652.0
DO46560
45 years, female, NA, stage:IV, dead, 286 days
651.7
DO46448
45 years, female, NA, stage:III, dead, 654 days
637.5
DO46508
50 years, female, NA, stage:III, dead, 2101 days
618.3
DO46330
60 years, female, NA, stage:III, dead, 684 days
606.7
DO46458
67 years, female, NA, stage:IV, alive, 3787 days
606.1
DO46325
54 years, female, NA, stage:III, dead, 477 days
601.1
DO46368
57 years, female, NA, stage:III, dead, 2879 days
594.5
DO46581
66 years, female, NA, stage:III, dead, 408 days
582.2
DO46432
56 years, female, NA, stage:III, alive, 2218 days
581.7
DO46400
70 years, female, NA, stage:III, dead, 719 days
577.3
DO46388
74 years, female, NA, stage:III, dead, 413 days
569.5
DO46360
58 years, female, NA, stage:IV, dead, 1759 days
564.1
DO46571
61 years, female, NA, stage:III, dead, 243 days
545.2
DO46382
62 years, female, NA, stage:IV, dead, 311 days
536.8
DO46588
74 years, female, NA, stage:III, dead, 438 days
530.7
DO46358
60 years, female, NA, stage:III, dead, 423 days
522.2
DO46398
66 years, female, NA, stage:III, alive, 437 days
518.3
DO46346
54 years, female, NA, stage:III, dead, 1187 days
503.3
DO46350
66 years, female, NA, stage:III, dead, 886 days
493.8
DO46344
46 years, female, NA, stage:III, dead, 642 days
484.2
DO46436
58 years, female, NA, stage:III, alive, 3193 days
477.1
DO46493
62 years, female, NA, stage:IV, alive, 839 days
426.8
DO46332
56 years, female, NA, stage:III, dead, 689 days
421.4
DO46386
49 years, female, NA, stage:III, dead, 1162 days
406.5
DO46374
69 years, female, NA, stage:III, dead, 1409 days
399.2
DO46336
70 years, female, NA, stage:IV, dead, 664 days
393.9
DO46340
62 years, female, NA, stage:III, dead, 616 days
393.2
DO46606
73 years, female, NA, stage:III, alive, 804 days
379.4
DO46354
73 years, female, NA, stage:III, dead, 843 days
378.2
DO46396
64 years, female, NA, stage:III, dead, 583 days
356.4
DO46348
58 years, female, NA, stage:IV, dead, 287 days
302.7
DO46566
78 years, female, NA, stage:III, dead, 673 days
274.1
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
1.4
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
1.4
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
1.4
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
1.4
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
1.3
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
1.3
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
1.1
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
1.1
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
1.1
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
1.0
161317f3-1a39-438e-af45-cd2502_D2
Tumor
1.0
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
1.0
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
1.0
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
1.0
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.9
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.9
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.9
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.9
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.9
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.8
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.8
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.8
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.8
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.8
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.8
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.8
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.8
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.8
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.8
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.8
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.8
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.7
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.7
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.7
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.7
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.7
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.7
15524912-685a-47ce-a824-567848_D2
Tumor
0.7
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.7
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.7
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.7
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.7
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.7
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.7
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.7
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.6
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.6
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.6
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.6
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.6
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.6
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.6
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.6
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.5
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.5
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.5
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.5
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.5
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.5
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.5
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.4
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.4
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.4
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.4
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.4
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.4
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.4
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.4
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.4
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.4
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.3
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.3
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.3
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.3
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.3
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.2
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.2
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.2
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.2
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.2
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.1
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.1
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.0
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.0
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.0
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.0
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.1
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.2
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.2
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.2
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.2
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.3
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.3
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.3
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.3
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.4
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.5
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.5
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.6
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.7
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.8
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.9
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.9
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-1.1
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-1.1
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
