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RPS15
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endocrine cells: High
Enterocytes: High
Enterocytes - Gradient: Descending
Enterocytes - Microvilli: Not detected
Goblet cells: High
Paneth cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1215.0 nTPM
HPA:554.1 nTPM
GTEx:1215.0 nTPM
FANTOM5:86.7 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA054510Antibody HPA057793
Endocrine cells -High
Enterocytes -High
Enterocytes - Gradient -Descending
Enterocytes - Microvilli -Not detected
Glandular cells Medium-
Goblet cells -High
Paneth cells -High




SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

554.1
overview
Male, age 65
Small intestine sample 232
nTPM: 710.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 552.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 481.3
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 471.8

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1215.0
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1215.0
Samples: 187

Max nTPM: 2309.3
Min nTPM: 649.6
Std nTPM: 334.6
Median nTPM: 1179.7
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2309.3
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2238.4
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2175.7
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2166.5
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2103.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2030.3
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1948.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1937.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1916.3
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1894.0
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1892.7
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1891.5
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1806.9
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1770.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1763.4
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1695.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1691.6
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1682.8
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1662.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1644.9
GTEX-183FY-1626-SM-793D8 20-29 years, male 1633.3
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1608.7
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1592.7
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1589.6
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1589.1
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1581.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1578.7
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1572.7
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1564.0
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1563.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1552.5
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1539.8
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1521.1
GTEX-1192X-2526-SM-59868 50-59 years, male 1512.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1479.5
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1473.9
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1470.4
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1466.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1463.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1439.8
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1431.2
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1425.6
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1422.8
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1413.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1406.5
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1403.4
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1390.0
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1386.1
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1383.1
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1375.3
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1372.4
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1335.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 1329.2
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1327.9
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1322.8
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1318.1
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1313.1
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1295.8
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1291.4
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1290.1
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1289.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1288.9
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1287.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1278.1
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1277.8
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1277.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1272.3
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1270.6
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1268.5
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1268.1
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1266.5
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1266.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1263.2
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1262.8
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1255.5
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1252.5
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1247.8
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1246.4
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1241.0
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1239.8
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1236.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1232.8
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1226.8
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1214.3
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1211.2
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1210.9
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1206.7
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1206.0
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1195.7
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1192.5
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1192.3
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1185.4
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1182.3
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1179.7
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1176.3
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1165.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1156.7
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1154.7
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1145.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1144.3
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1139.4
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1139.1
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1134.2
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1128.8
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1121.7
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1108.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1091.8
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1077.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1076.9
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1075.7
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1072.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1068.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1066.5
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1062.5
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1062.2
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1059.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1056.0
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1052.6
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1051.4
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1043.8
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1042.9
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1042.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1037.2
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1036.5
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1034.4
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1029.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1028.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1026.4
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1013.4
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1013.2
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1008.4
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1003.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 999.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 998.2
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 996.8
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 996.2
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 982.4
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 981.7
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 978.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 964.4
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 957.9
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 955.6
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 952.9
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 950.5
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 950.1
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 948.6
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 934.8
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 932.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 929.2
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 926.9
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 915.0
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 913.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 911.3
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 900.1
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 899.9
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 893.3
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 890.9
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 884.5
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 882.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 869.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 860.6
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 847.4
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 846.3
GTEX-YFCO-1326-SM-664NV 40-49 years, male 845.0
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 836.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 835.7
GTEX-144GM-1026-SM-79OKU 20-29 years, male 831.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 831.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 830.4
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 830.2
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 824.9
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 819.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 816.2
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 811.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 806.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 806.5
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 803.6
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 794.6
GTEX-1122O-1326-SM-5H11F 60-69 years, female 782.9
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 769.7
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 766.5
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 756.5
GTEX-14PN3-2026-SM-68729 60-69 years, female 755.8
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 741.3
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 714.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 711.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 649.6
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

86.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 86.7
FF:10024-101D6 15,40,85 years, mixed 86.7

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