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INO80B
HPA
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  • INO80B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

INO80B
Synonyms hIes2, HMGA1L4, HMGIYL4, IES2, PAP-1BP, PAPA-1, ZNHIT4
Gene descriptioni

Full gene name according to HGNC.

INO80 complex subunit B
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband p13.1
Chromosome location (bp) 74455087 - 74457944
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000115274 (version 109)
Entrez gene 83444
HGNC HGNC:13324
UniProt Q9C086 (UniProt - Evidence at protein level)
neXtProt NX_Q9C086
GeneCards INO80B
Antibodypedia INO80B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Induces growth and cell cycle arrests at the G1 phase of the cell cycle.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

DNA damage, DNA recombination, DNA repair, Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a subunit of an ATP-dependent chromatin remodeling complex, INO80, which plays a role in DNA and nucleosome-activated ATPase activity and ATP-dependent nucleosome sliding. Readthrough transcription of this gene into the neighboring downstream gene, which encodes WW domain-binding protein 1, generates a non-coding transcript. [provided by RefSeq, Feb 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
INO80B-201
ENSP00000233331
ENST00000233331
Q9C086
[Direct mapping] INO80 complex subunit B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000723 [telomere maintenance]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0006275 [regulation of DNA replication]
GO:0006281 [DNA repair]
GO:0006282 [regulation of DNA repair]
GO:0006310 [DNA recombination]
GO:0006338 [chromatin remodeling]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016604 [nuclear body]
GO:0031011 [Ino80 complex]
GO:0033044 [regulation of chromosome organization]
GO:0045739 [positive regulation of DNA repair]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0045995 [regulation of embryonic development]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0060382 [regulation of DNA strand elongation]
GO:1904507 [positive regulation of telomere maintenance in response to DNA damage]
Show all
356 aa
38.6 kDa
No 0
INO80B-202
ENSP00000386937
ENST00000409493
B8ZZH7
[Direct mapping] INO80 complex subunit B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0006338 [chromatin remodeling]
GO:0016604 [nuclear body]
GO:0031011 [Ino80 complex]
Show all
207 aa
22.8 kDa
No 0
INO80B-203
ENSP00000387267
ENST00000409917
B8ZZ93
[Direct mapping] INO80 complex subunit B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0006338 [chromatin remodeling]
GO:0016604 [nuclear body]
GO:0031011 [Ino80 complex]
Show all
184 aa
20.5 kDa
No 0
INO80B-204
ENSP00000389887
ENST00000431187
C9JKY0
[Direct mapping] INO80 complex subunit B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0006338 [chromatin remodeling]
GO:0016604 [nuclear body]
GO:0031011 [Ino80 complex]
Show all
176 aa
19.6 kDa
No 0

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