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EFEMP1
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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Medium
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: High
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:12.6 nTPM
HPA Brain:79.2 nTPM
GTEx:12.6 nTPM
FANTOM5:55.2 Scaled Tags Per Million
Pig:3.2 nTPM
Mouse:14.6 nTPM
Allen mouse:1.0 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA070841Antibody CAB016368
Bergmann glia - cytoplasm/membrane -Not detected
Bergmann glia - nucleus -Not detected
GLUC cells - cytoplasm/membrane -Not detected
GLUC cells - nucleus -Not detected
Purkinje cells Low-
Purkinje cells - cytoplasm/membrane -High
Purkinje cells - dendrites -Not detected
Purkinje cells - nucleus -Not detected
Cells in granular layer Not detected-
Cells in molecular layer Not detected-
Granular cells - cytoplasm/membrane -Not detected
Granular cells - nucleus -Not detected
Molecular layer - neuropil -Low
Molecular layer cells - cytoplasm/membrane -Not detected
Molecular layer cells - nucleus -Medium
Processes in granular layer -Not detected
Processes in molecular layer -Not detected
Processes in white matter -Not detected
Synaptic glomeruli - capsule -Not detected
Synaptic glomeruli - core -Not detected
White matter cells - cytoplasm/membrane -Not detected
White matter cells - nucleus -Not detected





CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.2
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 45.6
2003 Female, age 85, right hemisphere 89.8
1768 Female, age 72, unknown 48.9
1769 Male, age 76, right hemisphere 43.7
2101 Male, age 74, right hemisphere 43.7
1774 Male, age 80, left hemisphere 42.8
2055 Female, age 91, right hemisphere 39.3
2006 Male, age 61, right hemisphere 32.7
1788 Male, age 55, unknown 23.5
Cerebellar nuclei
nTPM: 79.2
2783 Female, age 72, unknown 115.6
2175 Male, age 61, right hemisphere 113.1
2177 Female, age 85, both hemispheres 92.7
1871 Male, age 74, unknown 81.5
1966 Female, age 91, left hemisphere 80.0
2005 Male, age 80, left hemisphere 68.3
2882 Male, age 76, left hemisphere 68.1
1879 Male, age 55, unknown 56.2
2318 Male, age 74, left hemisphere 37.7
Flocculonodular lobe
nTPM: 33.4
1767 Male, age 76, left hemisphere 44.4
2176 Female, age 91, right hemisphere 35.9
1835 Female, age 85, right hemisphere 35.5
2004 Male, age 61, right hemisphere 31.2
1765 Male, age 55, unknown 30.5
1771 Male, age 80, left hemisphere 29.7
1792 Male, age 74, unknown 26.7
Vermis
nTPM: 45.6
1766 Male, age 55, unknown 83.2
1751 Male, age 74, right hemisphere 72.0
1778 Female, age 91, left hemisphere 59.9
2834 Male, age 80, left hemisphere 46.2
1770 Male, age 76, left hemisphere 41.5
1928 Female, age 72, unknown 31.7
1825 Male, age 74, unknown 31.0
2460 Male, age 61, both hemispheres 23.5
1988 Female, age 85, left hemisphere 21.5

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.6
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 7.9
Samples: 215

Max nTPM: 42.8
Min nTPM: 0.4
Std nTPM: 6.4
Median nTPM: 6.1
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 42.8
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 30.2
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 28.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 27.4
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 26.3
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 26.2
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 25.3
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 24.9
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 24.8
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 24.8
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 24.3
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 22.9
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 21.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 18.7
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 18.3
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 17.8
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 17.6
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 17.4
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 17.4
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 16.6
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 15.9
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 15.8
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 15.6
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 14.4
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 14.4
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 14.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 13.9
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 13.8
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 13.8
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 13.5
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 13.5
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 13.2
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 13.1
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 12.8
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 12.7
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 12.7
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 12.5
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 12.5
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 12.1
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 12.1
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 12.0
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 11.9
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 11.8
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 11.8
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 11.7
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 11.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 11.6
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 11.5
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 11.0
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 10.9
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 10.9
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 10.8
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 10.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 10.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 10.5
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 10.5
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 10.2
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 10.2
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 10.1
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 10.0
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 9.6
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 9.4
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 9.2
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 9.2
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 9.1
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 8.8
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 8.8
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 8.7
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 8.7
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 8.5
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 8.5
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 8.4
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 8.3
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 8.2
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 8.1
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 8.1
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 8.0
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 8.0
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 7.9
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 7.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 7.9
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 7.8
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 7.8
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 7.7
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 7.6
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 7.6
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 7.6
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 7.6
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 7.5
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 7.5
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 7.5
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 7.4
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 7.4
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 7.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 7.3
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 7.3
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 7.3
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 7.2
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 7.2
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 7.1
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 7.1
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 6.7
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 6.7
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 6.7
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 6.3
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 6.3
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 6.2
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 6.1
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 6.0
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 6.0
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 5.9
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 5.8
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 5.7
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 5.7
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 5.6
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 5.5
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 5.4
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 5.4
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 5.4
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 5.4
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 5.4
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 5.4
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 5.2
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 5.2
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 5.1
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 5.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 5.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 5.0
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 5.0
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 4.9
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 4.9
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 4.9
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 4.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 4.7
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 4.7
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 4.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 4.6
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 4.6
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 4.5
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 4.5
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 4.5
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 4.5
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 4.4
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 4.3
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 4.2
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 4.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 4.2
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 4.2
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 4.1
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 4.0
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 4.0
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 3.9
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 3.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 3.8
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 3.6
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 3.6
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 3.6
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 3.5
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 3.3
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 3.3
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 3.2
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 3.2
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 3.2
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 3.1
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 3.0
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 2.9
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 2.8
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 2.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 2.8
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 2.8
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 2.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 2.7
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 2.7
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 2.6
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 2.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 2.6
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 2.5
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 2.5
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 2.5
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 2.4
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 2.3
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 2.3
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 2.3
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 2.3
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 2.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 2.2
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 2.2
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 2.1
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 2.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 1.9
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 1.9
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 1.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 1.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 1.8
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 1.8
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 1.7
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 1.7
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 1.7
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 1.7
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 1.6
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 1.6
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 1.6
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 1.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 1.5
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 1.4
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 1.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 1.3
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 1.2
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 1.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 1.2
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 0.9
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 0.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 0.8
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 0.5
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 0.4
Show allShow less
Brain - Cerebellum
Average nTPM: 12.6
Samples: 241

Max nTPM: 48.6
Min nTPM: 1.0
Std nTPM: 7.8
Median nTPM: 11.0
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 48.6
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 39.9
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 38.2
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 35.9
GTEX-11ONC-3026-SM-5985W 60-69 years, male 34.4
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 33.9
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 32.3
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 31.9
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 31.5
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 31.3
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 30.9
GTEX-RU72-2926-SM-2TF66 50-59 years, female 29.3
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 29.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 28.8
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 27.7
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 27.1
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 26.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 26.2
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 25.9
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 24.9
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 24.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 24.3
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 24.0
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 23.3
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 23.2
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 23.2
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 22.0
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 21.9
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 21.4
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 21.3
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 21.1
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 20.6
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 20.5
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 20.3
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 20.2
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 20.0
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 19.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 19.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 19.5
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 18.9
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 18.6
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 18.6
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 18.5
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 18.5
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 18.2
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 18.1
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 18.1
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 17.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 17.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 16.8
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 16.7
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 16.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 16.6
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 16.5
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 16.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 16.2
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 16.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 15.9
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 15.8
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 15.5
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 15.4
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 15.2
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 14.9
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 14.8
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 14.7
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 14.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 14.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 14.1
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 14.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 14.0
GTEX-12126-0926-SM-5FQTW 20-29 years, male 13.9
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 13.9
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 13.9
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 13.9
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 13.9
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 13.9
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 13.8
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 13.8
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 13.8
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 13.7
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 13.7
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 13.6
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 13.5
GTEX-11EI6-2926-SM-5985U 60-69 years, male 13.5
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 13.5
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 13.4
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 13.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 13.3
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 13.3
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 13.3
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 13.2
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 13.2
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 13.1
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 12.7
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 12.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 12.7
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 12.7
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 12.6
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 12.4
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 12.3
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 12.2
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 12.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 12.1
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 12.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 12.0
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 12.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 12.0
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 11.8
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 11.6
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 11.5
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 11.4
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 11.4
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 11.3
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 11.3
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 11.3
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 11.2
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 11.0
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 11.0
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 11.0
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 11.0
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 11.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 10.9
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 10.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 10.9
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 10.9
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 10.7
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 10.7
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 10.6
GTEX-145LS-3026-SM-5O99S 60-69 years, female 10.6
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 10.6
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 10.6
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 10.6
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 10.5
GTEX-1192X-3226-SM-5987D 50-59 years, male 10.4
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 10.4
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 10.3
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 10.2
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 10.2
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 10.2
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 10.1
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 10.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 10.1
GTEX-13112-2926-SM-5DUWT 50-59 years, male 9.8
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 9.8
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 9.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 9.7
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 9.6
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 9.6
GTEX-11NUK-3026-SM-5986K 50-59 years, male 9.4
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 9.3
GTEX-15G19-2826-SM-6M48K 60-69 years, male 9.3
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 9.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 9.3
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 9.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 9.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 9.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 9.1
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 9.0
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 9.0
GTEX-17EVP-2926-SM-793BU 40-49 years, male 8.8
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 8.7
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 8.7
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 8.7
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 8.6
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 8.5
GTEX-18465-2926-SM-7KFSE 50-59 years, male 8.4
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 8.4
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 8.4
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 8.3
GTEX-1B933-3026-SM-731DB 50-59 years, female 8.1
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 8.1
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 7.8
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 7.8
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 7.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 7.7
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 7.7
GTEX-X261-3126-SM-4PQZC 50-59 years, male 7.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 7.5
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 7.3
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 7.3
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 7.3
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 7.2
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 7.2
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 7.0
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 7.0
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 6.9
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 6.9
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 6.9
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 6.8
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 6.8
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 6.7
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 6.7
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 6.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 6.6
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 6.6
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 6.6
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 6.5
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 6.5
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 6.5
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 6.5
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 6.5
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 6.2
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 6.1
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 6.1
GTEX-14PN4-3026-SM-664O4 50-59 years, male 6.0
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 6.0
GTEX-11DYG-2926-SM-5H132 60-69 years, male 5.8
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 5.7
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 5.6
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 5.4
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 5.1
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 4.9
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 4.6
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 4.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 4.4
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 4.3
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 4.2
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 4.1
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 4.1
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 4.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 3.9
GTEX-14E6D-2926-SM-664OP 50-59 years, male 3.9
GTEX-14ABY-3026-SM-664NE 50-59 years, male 3.5
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 3.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 3.4
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 3.4
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 3.2
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 3.0
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 3.0
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 2.8
GTEX-WL46-2826-SM-3LK81 50-59 years, male 2.6
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 2.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 2.3
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 2.1
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 1.9
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 1.8
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 1.7
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 1.7
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 1.4
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 1.3
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 1.0
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

55.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 55.2
FF:10166-103B4 76 years, female 65.2
FF:10083-102B2 22-68 years, mixed 45.2

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.2
Pig sample Sample description nTPM
Cerebellum
nTPM: 3.2
Samples: 4

Max nTPM: 6.1
Min nTPM: 1.8
Sample A Female 6.1
Sample B Female 2.4
Sample C Male 1.8
Sample D Male 2.6

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.6
Mouse sample Sample description nTPM
Cerebellum
nTPM: 14.6
Samples: 4

Max nTPM: 18.9
Min nTPM: 12.0
Sample A Male 12.0
Sample B Male 18.9
Sample C Female 14.8
Sample D Female 12.7

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 1.0
71724468 Antisense, RP_050927_03_F05, Mouse strain C57BL/6J (56 days, male) 1.0

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