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ELMOD3
HPA
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  • ELMOD3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ELMOD3
Synonyms DFNB88, FLJ21977, RBED1, RBM29
Gene descriptioni

Full gene name according to HGNC.

ELMO domain containing 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband p11.2
Chromosome location (bp) 85354394 - 85391752
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000115459 (version 109)
Entrez gene 84173
HGNC HGNC:26158
UniProt Q96FG2 (UniProt - Evidence at protein level)
neXtProt NX_Q96FG2
GeneCards ELMOD3
Antibodypedia ELMOD3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Acts as a GTPase-activating protein (GAP) for ARL2 with low specific activity.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

GTPase activation
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the engulfment and cell motility family of GTPase-activating proteins that regulate Arf GTPase proteins. Members of this family are defined by a conserved engulfment and cell motility domain. In rat cochlea, the encoded protein is found in stereocilia, kinocilia and cuticular plate of developing hair cells suggesting a function for this protein in cochlear sensory cells. An allelic variant of this family has been associated with autosomal recessive nonsyndromic deafness-88 in humans. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ELMOD3-201
ENSP00000318264
ENST00000315658
Q96FG2
[Direct mapping] ELMO domain-containing protein 3
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Ear disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0032420 [stereocilium]
GO:0042995 [cell projection]
GO:0060091 [kinocilium]
Show all
391 aa
44.3 kDa
No 0
ELMOD3-202
ENSP00000377434
ENST00000393852
Q96FG2
[Direct mapping] ELMO domain-containing protein 3
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Ear disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0032420 [stereocilium]
GO:0042995 [cell projection]
GO:0060091 [kinocilium]
Show all
381 aa
43 kDa
No 0
ELMOD3-203
ENSP00000387139
ENST00000409013
Q96FG2
[Direct mapping] ELMO domain-containing protein 3
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Ear disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0032420 [stereocilium]
GO:0042995 [cell projection]
GO:0060091 [kinocilium]
Show all
381 aa
43 kDa
No 0
ELMOD3-204
ENSP00000386257
ENST00000409331
B8ZZT8
[Direct mapping] ELMO domain-containing protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Ear disease
Show all
GO:0005096 [GTPase activator activity]
Show all
202 aa
22.9 kDa
No 0
ELMOD3-205
ENSP00000386248
ENST00000409344
Q96FG2
[Direct mapping] ELMO domain-containing protein 3
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Ear disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0032420 [stereocilium]
GO:0042995 [cell projection]
GO:0060091 [kinocilium]
Show all
381 aa
43 kDa
No 0
ELMOD3-206
ENSP00000386304
ENST00000409890
Q96FG2
[Direct mapping] ELMO domain-containing protein 3
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Ear disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0032420 [stereocilium]
GO:0042995 [cell projection]
GO:0060091 [kinocilium]
Show all
381 aa
43 kDa
No 0
ELMOD3-209
ENSP00000393443
ENST00000418268
D3YTJ5
[Direct mapping] ELMO domain-containing protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Ear disease
Show all
120 aa
13.4 kDa
No 0
ELMOD3-216
ENSP00000436715
ENST00000462891
E9PI96
[Direct mapping] ELMO domain-containing protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Ear disease
Show all
126 aa
14.2 kDa
No 0

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