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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:169.4 nTPM
HPA Brain:100.2 nTPM
GTEx:169.4 nTPM
FANTOM5:289.3 Scaled Tags Per Million
Pig:47.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA034500Antibody HPA034501
Glial cells Not detectedLow
Neuronal cells MediumHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 98.3
1857 Female, age 85, left hemisphere 127.7
2846 Female, age 79, unknown 126.8
2290 Female, age 72, unknown 117.0
1854 Male, age 80, left hemisphere 113.9
1781 Male, age 74, unknown 85.5
2289 Male, age 61, right hemisphere 80.0
2288 Male, age 75, left hemisphere 68.4
2481 Female, age 94, left hemisphere 67.4
Globus pallidus, externus
nTPM: 39.2
2772 Female, age 79, unknown 45.3
2395 Male, age 75, both hemispheres 44.0
2646 Male, age 61, right hemisphere 37.4
1996 Male, age 80, right hemisphere 36.7
2567 Female, age 72, unknown 32.4
Globus pallidus, internus
nTPM: 38.0
2483 Female, age 94, right hemisphere 54.3
2287 Male, age 75, right hemisphere 45.4
2037 Male, age 80, right hemisphere 35.3
2778 Female, age 91, both hemispheres 35.2
1818 Male, age 74, unknown 34.9
2111 Female, age 85, right hemisphere 30.8
2566 Female, age 72, unknown 30.1
Nucleus accumbens
nTPM: 97.3
1856 Female, age 91, right hemisphere 153.2
1783 Male, age 74, unknown 133.8
1806 Female, age 85, left hemisphere 118.8
2824 Male, age 61, right hemisphere 102.0
2698 Female, age 72, unknown 98.3
2286 Male, age 75, left hemisphere 75.6
2391 Female, age 94, left hemisphere 53.1
2732 Male, age 80, right hemisphere 43.8
Nucleus basalis of Meynert
nTPM: 66.1
2393 Male, age 80, right hemisphere 87.4
2484 Female, age 94, left hemisphere 73.3
2821 Male, age 75, both hemispheres 64.6
2569 Male, age 61, both hemispheres 39.0
Nucleus of the diagonal band
nTPM: 57.5
1812 Female, age 91, both hemispheres 70.7
2775 Male, age 80, right hemisphere 63.6
2195 Female, age 85, both hemispheres 56.0
2029 Male, age 61, right hemisphere 53.4
1979 Male, age 74, unknown 44.0
Putamen
nTPM: 100.2
1838 Male, age 80, right hemisphere 131.5
2466 Female, age 79, unknown 121.7
1937 Female, age 91, right hemisphere 116.7
1829 Male, age 74, unknown 108.4
2489 Female, age 72, unknown 82.0
2647 Male, age 75, left hemisphere 71.7
2482 Female, age 94, left hemisphere 69.2
Septal nuclei
nTPM: 53.4
1960 Male, age 74, unknown 72.1
2031 Female, age 72, unknown 65.3
2629 Female, age 94, right hemisphere 55.9
2009 Female, age 91, both hemispheres 54.1
2059 Female, age 85, both hemispheres 48.6
2394 Male, age 61, left hemisphere 39.7
2199 Male, age 80, right hemisphere 37.8
Stria terminalis, bed nucleus
nTPM: 51.6
1974 Female, age 91, both hemispheres 60.4
2486 Female, age 94, both hemispheres 59.6
2201 Male, age 74, unknown 34.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

169.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 145.0
Samples: 246

Max nTPM: 361.4
Min nTPM: 39.4
Std nTPM: 56.6
Median nTPM: 142.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 361.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 298.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 297.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 297.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 295.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 270.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 269.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 266.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 260.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 260.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 254.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 242.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 237.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 237.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 236.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 235.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 234.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 232.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 227.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 225.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 225.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 224.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 220.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 217.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 216.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 215.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 214.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 213.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 212.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 211.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 211.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 211.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 208.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 208.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 206.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 205.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 205.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 203.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 203.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 203.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 201.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 201.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 200.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 200.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 199.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 196.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 196.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 195.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 195.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 191.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 189.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 188.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 187.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 187.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 187.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 186.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 185.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 184.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 184.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 183.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 183.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 183.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 183.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 183.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 181.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 181.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 180.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 178.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 176.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 176.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 176.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 175.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 175.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 174.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 173.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 170.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 170.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 168.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 168.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 168.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 167.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 166.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 164.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 164.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 164.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 164.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 160.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 159.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 159.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 158.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 158.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 158.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 157.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 156.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 155.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 154.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 153.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 153.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 153.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 153.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 151.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 150.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 150.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 150.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 150.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 149.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 148.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 148.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 147.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 147.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 147.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 146.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 146.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 146.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 146.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 145.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 145.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 144.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 144.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 143.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 143.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 142.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 142.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 142.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 141.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 141.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 141.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 141.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 140.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 140.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 140.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 139.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 138.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 138.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 136.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 136.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 135.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 135.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 134.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 133.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 131.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 130.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 130.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 129.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 127.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 126.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 124.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 123.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 123.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 123.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 123.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 123.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 122.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 122.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 122.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 120.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 119.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 119.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 118.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 117.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 117.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 116.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 116.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 114.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 112.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 111.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 110.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 110.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 109.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 109.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 108.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 107.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 106.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 105.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 104.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 104.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 103.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 103.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 103.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 102.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 102.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 102.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 101.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 100.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 100.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 99.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 98.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 97.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 97.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 97.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 96.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 96.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 96.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 95.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 90.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 90.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 89.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 89.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 87.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 87.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 85.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 84.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 84.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 82.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 82.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 82.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 80.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 80.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 80.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 79.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 79.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 78.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 78.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 77.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 77.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 77.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 77.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 76.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 76.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 76.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 75.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 75.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 75.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 73.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 73.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 72.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 71.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 70.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 69.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 69.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 68.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 68.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 67.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 67.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 66.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 65.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 64.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 63.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 63.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 58.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 57.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 55.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 54.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 43.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 39.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 169.4
Samples: 246

Max nTPM: 367.5
Min nTPM: 45.6
Std nTPM: 61.0
Median nTPM: 177.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 367.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 307.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 297.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 295.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 294.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 290.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 285.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 277.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 270.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 269.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 268.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 265.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 265.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 262.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 261.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 257.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 255.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 252.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 252.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 252.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 251.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 246.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 243.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 243.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 240.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 238.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 236.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 234.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 234.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 232.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 231.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 231.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 230.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 230.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 229.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 228.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 228.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 227.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 227.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 227.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 224.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 224.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 224.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 223.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 223.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 223.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 223.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 221.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 219.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 219.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 219.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 214.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 211.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 211.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 211.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 211.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 210.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 210.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 210.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 210.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 210.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 210.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 210.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 210.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 209.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 209.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 209.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 208.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 207.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 207.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 206.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 206.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 205.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 205.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 205.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 204.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 202.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 201.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 200.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 200.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 200.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 200.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 200.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 198.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 197.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 197.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 196.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 195.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 195.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 195.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 195.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 195.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 194.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 194.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 193.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 193.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 193.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 193.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 192.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 191.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 191.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 189.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 189.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 187.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 187.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 186.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 186.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 185.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 185.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 184.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 184.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 184.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 183.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 182.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 181.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 181.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 181.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 180.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 180.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 179.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 179.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 177.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 177.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 177.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 177.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 175.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 174.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 174.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 174.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 174.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 173.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 172.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 171.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 170.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 170.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 169.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 169.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 167.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 165.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 164.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 164.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 164.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 163.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 163.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 163.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 162.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 162.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 161.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 160.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 159.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 158.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 158.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 157.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 155.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 155.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 155.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 155.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 154.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 154.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 153.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 153.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 153.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 152.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 152.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 152.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 149.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 149.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 147.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 147.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 146.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 145.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 144.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 143.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 143.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 142.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 140.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 139.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 138.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 135.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 131.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 131.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 128.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 128.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 124.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 121.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 118.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 116.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 115.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 114.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 113.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 112.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 112.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 112.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 111.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 110.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 110.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 106.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 104.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 103.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 98.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 98.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 97.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 97.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 97.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 96.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 95.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 95.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 95.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 95.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 94.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 93.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 91.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 89.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 87.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 85.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 83.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 83.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 83.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 82.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 81.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 78.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 78.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 76.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 75.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 75.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 73.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 73.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 73.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 72.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 72.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 71.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 70.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 65.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 63.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 60.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 59.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 59.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 58.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 57.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 57.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 55.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 53.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 51.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 50.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 47.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 45.6
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Brain - Putamen (basal ganglia)
Average nTPM: 145.2
Samples: 205

Max nTPM: 296.6
Min nTPM: 52.5
Std nTPM: 55.1
Median nTPM: 138.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 296.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 290.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 282.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 272.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 261.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 260.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 244.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 242.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 239.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 237.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 235.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 235.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 235.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 232.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 231.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 228.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 224.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 224.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 223.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 223.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 221.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 220.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 219.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 218.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 218.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 217.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 215.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 213.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 213.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 208.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 208.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 206.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 205.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 205.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 204.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 203.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 201.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 200.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 199.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 198.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 197.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 193.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 193.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 193.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 191.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 190.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 189.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 189.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 187.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 186.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 185.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 184.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 182.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 182.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 179.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 178.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 177.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 177.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 177.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 176.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 175.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 175.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 174.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 174.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 173.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 173.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 172.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 172.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 171.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 171.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 170.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 170.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 169.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 169.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 168.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 168.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 164.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 164.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 162.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 162.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 162.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 161.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 159.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 158.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 157.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 157.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 153.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 153.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 153.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 152.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 151.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 151.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 150.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 149.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 148.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 146.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 146.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 145.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 142.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 141.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 141.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 139.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 138.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 138.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 137.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 137.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 137.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 137.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 136.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 136.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 134.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 134.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 134.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 133.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 132.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 132.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 130.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 129.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 128.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 126.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 126.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 125.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 125.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 124.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 122.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 122.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 122.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 121.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 121.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 119.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 117.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 114.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 114.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 113.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 113.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 112.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 111.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 111.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 109.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 108.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 107.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 107.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 107.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 105.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 103.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 102.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 102.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 101.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 100.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 100.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 100.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 100.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 100.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 99.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 98.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 96.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 95.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 95.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 93.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 91.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 91.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 90.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 89.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 87.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 87.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 85.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 83.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 83.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 83.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 83.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 83.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 83.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 83.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 82.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 82.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 81.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 81.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 80.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 80.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 80.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 79.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 78.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 78.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 77.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 76.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 75.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 75.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 73.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 73.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 73.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 73.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 72.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 72.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 69.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 69.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 68.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 68.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 64.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 63.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 61.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 59.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 59.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 58.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 58.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 52.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

289.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 275.0
FF:10164-103B2 76 years, female 275.0
Nucleus accumbens
Scaled Tags Per Million: 151.7
FF:10037-101F1 23-56 years, mixed 151.7
Putamen
Scaled Tags Per Million: 289.3
FF:10176-103C5 60 years, female 289.3
Globus pallidus
Scaled Tags Per Million: 98.7
FF:10175-103C4 60 years, female 100.4
FF:10161-103A8 76 years, female 97.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.0
Pig sample Sample description nTPM
Caudate
nTPM: 47.0
Samples: 4

Max nTPM: 55.9
Min nTPM: 36.2
Sample A Female 36.2
Sample B Female 49.0
Sample C Male 55.9
Sample D Male 46.8
Putamen
nTPM: 46.5
Samples: 4

Max nTPM: 60.5
Min nTPM: 25.4
Sample A Female 25.4
Sample B Female 49.7
Sample C Male 60.5
Sample D Male 50.4
Septum
nTPM: 27.4
Samples: 4

Max nTPM: 36.5
Min nTPM: 17.2
Sample A Female 36.5
Sample B Female 34.5
Sample C Male 17.2
Sample D Male 21.4
Ventral pallidum
nTPM: 34.1
Samples: 4

Max nTPM: 43.3
Min nTPM: 21.6
Sample A Female 43.3
Sample B Female 35.7
Sample C Male 21.6
Sample D Male 35.8

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